KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:00:00 2014 Check: 00 .. Name: ENSBTAP00000049772/1-753 Len: 857 Check: 4115 Weight: 1.00 Name: bmy_00183T0/1-621 Len: 857 Check: 9301 Weight: 1.00 Name: BACU006969/1-409 Len: 857 Check: 4601 Weight: 1.00 Name: ENSP00000314080/1-733 Len: 857 Check: 720 Weight: 1.00 // 1 50 ENSBTAP00000049772/1-753 KYVHRNIQLK TPISVGLAGP GLGTPGGHIW KAEWSSSSSA SLHPRCAGRR bmy_00183T0/1-621 ---------- ---------- ---------- ---------- ---------- BACU006969/1-409 ---------- ---------- ---------- ---------- ---------- ENSP00000314080/1-733 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000049772/1-753 PWLCRAKYRT AARWRHSCSS ARRPGPLQIR VCGKRGGAET RPGRGEDGPA bmy_00183T0/1-621 ---------- ---------- ---------- ---------- ---------- BACU006969/1-409 -----MEKRT GIRWTQNTEW KQ-------- ---------- ---------- ENSP00000314080/1-733 -----MTFPE ADILLKS--- ---------- ---------- ---------- 101 150 ENSBTAP00000049772/1-753 GQTDRGPGGR RAAQRSHVPP WIRRQPGPGL PTCPPGECAG QTMLDTMEAP bmy_00183T0/1-621 ---------- ---------- ---------- ---------- --MLDTMEAP BACU006969/1-409 ---------- ---------- ---------- -----GDCAG QTMLDTMEAP ENSP00000314080/1-733 ---------- ---------- ---------- -----GECAG QTMLDTMEAP 151 200 ENSBTAP00000049772/1-753 GHSRQLLLQL NNQRTKGFLC DVIIVVQNAL FRAHKNVLAA SSAYLKSLVV bmy_00183T0/1-621 GHSRQLLLQL NNQRTKGFLC DVIIVVQNAL FRAHKNVLAA SSAYLKSLVV BACU006969/1-409 GHSRQLLLQL NNQRTKGFLC DVIIVVQNAL FRAHKNVLAA SSAYLKSLVV ENSP00000314080/1-733 GHSRQLLLQL NNQRTKGFLC DVIIVVQNAL FRAHKNVLAA SSAYLKSLVV 201 250 ENSBTAP00000049772/1-753 HDNLLNLDHD MVSPAVFRLV LDFIYTGRLA DGAEAAAAAA VAPGAEPSLG bmy_00183T0/1-621 HDNLLNLDHD MVSPAVFRLV LDFIYTGRLA DGAEAAAAAA VAPGAEPSLG BACU006969/1-409 HDNLLNLDHD M--------- ---------- ---------- ---------- ENSP00000314080/1-733 HDNLLNLDHD MVSPAVFRLV LDFIYTGRLA DGAEAAAAAA VAPGAEPSLG 251 300 ENSBTAP00000049772/1-753 AVLAAASYLQ IPDLVALCKK RLKRHGKYCH LRGGG----- ---------- bmy_00183T0/1-621 AVLAAASYLQ IPDLVALCKK RLKRHGN--- ---------- ---------- BACU006969/1-409 ---------- ---------- ---------- ---------- ---------- ENSP00000314080/1-733 AVLAAASYLQ IPDLVALCKK RLKRHGKYCH LRGGGGGGGG YAPYGRPGRG 301 350 ENSBTAP00000049772/1-753 ---------- ---------- ---------- ---------- ---------- bmy_00183T0/1-621 ---------- ---------- ---------- ---------- ---------- BACU006969/1-409 ---------- ---------- ---------- ---------- ---------- ENSP00000314080/1-733 LRAATPVIQA CYPSPVGPPP PPAAEPPSGP EAAVNTHCAE LYASGPGPAA 351 400 ENSBTAP00000049772/1-753 ---------- ---------- ---------- --------AR PDSPPSAGPA bmy_00183T0/1-621 ---------- ---------- -PPGSAPPER PPGERELPPR PDSPPSAGPA BACU006969/1-409 ---------- ---------- ---------- ---------- ---------- ENSP00000314080/1-733 ALCASERRCS PLCGLDLSKK SPPGSAAPER PLAERELPPR PDSPPSAGPA 401 450 ENSBTAP00000049772/1-753 AYKEPPLTLP PLPPLPFQKL EEAGPPPDPF R-GGGGSPGS EPPGRPDGPS bmy_00183T0/1-621 AYKEPPLALP PLPPLPFQKL EEAGPPPDPF RGGGGGSPGP EPPGRPDGPS BACU006969/1-409 ---------- ---------- ---------- ---------- ---------- ENSP00000314080/1-733 AYKEPPLALP SLPPLPFQKL EEAAPPSDPF R-GGSGSPGP EPPGRPDGPS 451 500 ENSBTAP00000049772/1-753 LLYRWMKHEP GLGSYGDELG RERGSPSERC EERGGDPSAS PGGPPLGLAP bmy_00183T0/1-621 LLYRWMKHEP GLGSYGDELG RERGSPSERC EERGGDPAAS PGGPPLGLAP BACU006969/1-409 ---------- ---------- ---------- ---------- ---------- ENSP00000314080/1-733 LLYRWMKHEP GLGSYGDELG RERGSPSERC EERGGDAAVS PGGPPLGLAP 501 550 ENSBTAP00000049772/1-753 PPRYAGSLDG PGAGGDGDDY KSSSEETGSS EDPSPPGGHL EGYPCPHLAY bmy_00183T0/1-621 PPRYPGSLDG PGAGGDGDDY KSSSEETGSS EDPSPPGGHL EGYPCPHLAY BACU006969/1-409 ---------- ---------- ---------- ---------- -GYPCPHLAY ENSP00000314080/1-733 PPRYPGSLDG PGAGGDGDDY KSSSEETGSS EDPSPPGGHL EGYPCPHLAY 551 600 ENSBTAP00000049772/1-753 GEPESFGDNL YVCIPCGKGF PSSEQLNAHV EAHVEEEEAL YGRAEAAEVA bmy_00183T0/1-621 GEPESFGDNL YVCIPCGKGF PSSEQLNAHV EAHVEEEEAL YGRAEAAEVA BACU006969/1-409 GEPESFGDNL YVCIPCGKGF PSSEQLNAHV EAHVEEEEAL YGRAEAAEVA ENSP00000314080/1-733 GEPESFGDNL YVCIPCGKGF PSSEQLNAHV EAHVEEEEAL YGRAEAAEVA 601 650 ENSBTAP00000049772/1-753 AGAAGLGPPF GGGGDKVAGA PGGLGELLRP YRCASCDKSY KDPATLRQHE bmy_00183T0/1-621 AGAAGLGPPF GGGGDKVAGA PGGLGELLRP YRCASCDKSY KDPATLRQHE BACU006969/1-409 AGAAGLGPPF GGGGDKGSGA PGGLGELLRP YRCASCDKSY KDPATLRQHE ENSP00000314080/1-733 AGAAGLGPPF GGGGDKVAGA PGGLGELLRP YRCASCDKSY KDPATLRQHE 651 700 ENSBTAP00000049772/1-753 KTHWLTRPYP CTICGKKFTQ RGTMTRHMRS HLGLKPFACD ACGMRFTRQY bmy_00183T0/1-621 KTHWLTRPYP CTICGKKFTQ RGTMTRHMRS HLGLKPFACD ACGMRFTRQY BACU006969/1-409 KTHWLTRPYP CTICGKKFTQ RGTMTRHMRS HLGLKPFACD ACGMRFTRQY ENSP00000314080/1-733 KTHWLTRPYP CTICGKKFTQ RGTMTRHMRS HLGLKPFACD ACGMRFTRQY 701 750 ENSBTAP00000049772/1-753 RLTEHMRIHS GEKPYECQVC GGKFAQQRNL ISHMKMHAVG GAAGAAGALA bmy_00183T0/1-621 RLTEHMRIHS GEKPYECQVC GGKFAQQRNL ISHMKMHAVG GAAGAAGALA BACU006969/1-409 RLTEHMRIHS GEKPYECQVC GGKFAQQRNL ISHMKMHAVG GAAGAAGALA ENSP00000314080/1-733 RLTEHMRIHS GEKPYECQVC GGKFAQQRNL ISHMKMHAVG GAAGAAGALA 751 800 ENSBTAP00000049772/1-753 GLGGLPGVPG PDGKGKLDFP EGVFAVARLT AEQLSLKQQD KAAAAELLAQ bmy_00183T0/1-621 GLGGLPGVPG PDGKGKLDFP EGVFAVARLT AEQLSLKQQD KAAAAELLAQ BACU006969/1-409 GLGGLPGVPG PDGKGKLDFP EGVFAVARLT AEQLSLKQQD KAAAAELLAQ ENSP00000314080/1-733 GLGGLPGVPG PDGKGKLDFP EGVFAVARLT AEQLSLKQQD KAAAAELLAQ 801 850 ENSBTAP00000049772/1-753 TTHFLHDPKV ALESLYPLAK FTAELGLSPD KAAEVLSQGA HLAAGPDGRT bmy_00183T0/1-621 TTHFLHDPKV ALESLYPLAK FTAELGLSPD KAAEVLSQGA HLAAGPDGRT BACU006969/1-409 TTHFLHDPKV ALESLYPLAK FTAELGLSPD KAAEVLSQGA HLAAGPDGRT ENSP00000314080/1-733 TTHFLHDPKV ALESLYPLAK FTAELGLSPD KAAEVLSQGA HLAAGPDGRT 851 900 ENSBTAP00000049772/1-753 IDRFSPT bmy_00183T0/1-621 IDRFSPT BACU006969/1-409 IDRFSPT ENSP00000314080/1-733 IDRFSPT