KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:59:57 2014 Check: 00 .. Name: ENSBTAP00000049735/1-657 Len: 786 Check: 6959 Weight: 1.00 Name: ENSP00000254963/1-686 Len: 786 Check: 2723 Weight: 1.00 Name: bmy_07681T0/1-758 Len: 786 Check: 9218 Weight: 1.00 Name: BACU019577/1-600 Len: 786 Check: 6696 Weight: 1.00 // 1 50 ENSBTAP00000049735/1-657 ---------- ---------- ---------- ---------- ---------- ENSP00000254963/1-686 ---------- ---------- ---------- ---------- ---------- bmy_07681T0/1-758 MFGGMCGPGT QSHTGHQGQL LYSWDITNVH VVPSSPDVPI WGPGRGSAEG BACU019577/1-600 ---------- ---------L HRKW------ ---------- --------EG 51 100 ENSBTAP00000049735/1-657 ---------- ---------- ---------- ---------- ---------- ENSP00000254963/1-686 ---------- ---------- ---------- ---------- ---------- bmy_07681T0/1-758 GAKGGAVDGR TSRALADAAE HSRPTGCGPR IQASGHRSSC RQGRATGPTK BACU019577/1-600 GDPGVA---- ---------- ---------- -----HQKT- -------PTC 101 150 ENSBTAP00000049735/1-657 MLAVPEMDLQ GLYIGSSPQR SPVPSPPASP RTQESCGIAP LTPSQSPKPE ENSP00000254963/1-686 MLAVPEMGLQ GLYIGSSPER SPVPSPPGSP RTQESCGIAP LTPSQSPKPE bmy_07681T0/1-758 MLAVPEMGLQ GLYSGSSPER SPVPSPPGSP RTQESCGIAP LTPSQSPKPE BACU019577/1-600 LLLTPE---- ---------- ---------- ---------- ---------- 151 200 ENSBTAP00000049735/1-657 ARGPQQAPFS VVVAIDFGTT SSGYAFSFAS DPEAIHMMRK WEGGDPGVAH ENSP00000254963/1-686 VRAPQQASFS VVVAIDFGTT SSGYAFSFAS DPEAIHMMRK WEGGDPGVAH bmy_07681T0/1-758 ARAPQQAPFS VVVAIDFGTT SSGYAFSFAS DPEAIHMM-- ---------- BACU019577/1-600 ---------- ---------- ---------- ---------- ---------- 201 250 ENSBTAP00000049735/1-657 QKTPTCLLLT PEGAFHSFGY TARDYYHDLD PEEARDWLYF EKFKMKIHST ENSP00000254963/1-686 QKTPTCLLLT PEGAFHSFGY TARDYYHDLD PEEARDWLYF EKFKMKIHSA bmy_07681T0/1-758 ---------- ------SFGY TARDYYHDLD PEEARDWLYF EKFKMKIHSA BACU019577/1-600 ---------- --GAFHSFGY TARDYYHDLD PEEARDWLYF EKFKMKIHSA 251 300 ENSBTAP00000049735/1-657 TDLTLKTQLE AVNGKKMPAL EVFAHALRFF KEHALQELSE QCPSLLEKDT ENSP00000254963/1-686 TDLTLKTQLE AVNGKTMPAL EVFAHALRFF REHALQELRE QSPSLPEKDT bmy_07681T0/1-758 TDLTLKTQLE AVNGKKMPAL EVFAHALRFF KEHALQELRD QCPSLPEKDT BACU019577/1-600 TDLTLKTQLE AVNGKKMPAL EVFAHALRFF KEHALQELRD QCPSLPEKDT 301 350 ENSBTAP00000049735/1-657 VRWVLTVPAI WKQPAKQFMR EAAYLAGLVS RENAEQLLIA LEPEAASVYC ENSP00000254963/1-686 VRWVLTVPAI WKQPAKQFMR EAAYLAGLVS RENAEQLLIA LEPEAASVYC bmy_07681T0/1-758 VRWVLTVPAI WKQPAKQFMR EAAYLAGLVS REDAEQLLIA LEPEAASVYC BACU019577/1-600 VRWVLTVPAI WKQPAKQFMR EAAYLAGLVS REDAEQLLIA LEPEAASVYC 351 400 ENSBTAP00000049735/1-657 RKLRLHQLVD LSSRAPGRGC LGERRSIDSS FRQ------- ---------- ENSP00000254963/1-686 RKLRLHQLLD LSGRAPGGGR LGERRSIDSS FRQAREQLRR SRHSRTFLVE bmy_07681T0/1-758 RKLRLHQLVD LSSRAPGSGR LGERRSIDSS FRQAREQLRR SRHSRTFLVE BACU019577/1-600 RKLRLHQLVD LSSRAPGSGR LGERRSIDSS FRQAREQLRR SRHSRTFLVE 401 450 ENSBTAP00000049735/1-657 ---------- --GDRYVVAD CGGGTVDLTV HQLEQPHGTL KELYKASGGP ENSP00000254963/1-686 SGVGELWAEM QAGDRYVVAD CGGGTVDLTV HQLEQPHGTL KELYKASGGP bmy_07681T0/1-758 SGVGELWAEM QAGDRYVVAD CGGGTVDLTV HQLEQPHGTL KELYKASGGP BACU019577/1-600 SGVGELWAEM QAGDRYVVAD CGGGTVDLTV HQLEQPHGTL KELYKASGGP 451 500 ENSBTAP00000049735/1-657 CGAVGVDLAF EQLLGRIFGE DFITTFKRQR PAAWVDLTIA FEARKRTAGP ENSP00000254963/1-686 YGAVGVDLAF EQLLCRIFGE DFIATFKRQR PAAWVDLTIA FEARKRTAGP bmy_07681T0/1-758 CGAVGVDLAF EQLLGRIFGE DFIATFKRQR PAAWVDLTIA FEARKRTAGP BACU019577/1-600 CGAVGVDLAF EQLLGRIFGE DFIATFKRQR PAAWVDLTIA FEARKRTAGP 501 550 ENSBTAP00000049735/1-657 HRTGALNISL PFSFIDFYRK QGGHNVETAL RKSSVNFVKW SSHGMLRMTC ENSP00000254963/1-686 HRAGALNISL PFSFIDFYRK QRGHNVETAL RRSSVNFVKW SSQGMLRMSC bmy_07681T0/1-758 HRAGALNISL PFSFIDFYRK QRGHNVETAL RRSSVNFVKW SSQGMLRMSC BACU019577/1-600 HRAGALNISL PFSFIDFYRK QRGHNVETAL RRSSVNFVKW SSQGMLRMSC 551 600 ENSBTAP00000049735/1-657 EAMNELFQPT VSGIIQHIEA LLERPEVQGV KLLFLVGGFA ESAMLQHAVQ ENSP00000254963/1-686 EAMNELFQPT VSGIIQHIEA LLARPEVQGV KLLFLVGGFA ESAVLQHAVQ bmy_07681T0/1-758 EAMNDLFQPT VSGIIQHIEA LLERPEVQGV KLLFLVGGFA ESAVLQHAVQ BACU019577/1-600 EAMNDLFQPT VSGIIQHIEA LLERPEVQGV KLLFLVGGFA ESAVLQHAVQ 601 650 ENSBTAP00000049735/1-657 AALGARGLRV VVPHDVALTI LKGAVLFGQA PGVVRVRRSP LTYGVGVLNR ENSP00000254963/1-686 AALGARGLRV VVPHDVGLTI LKGAVLFGQA PGVVRVRRSP LTYGVGVLNR bmy_07681T0/1-758 AALGARGLRV VVPHDVGLTI LKGAVLFGQA PGVVRVRRSP LTYGVGVLNR BACU019577/1-600 AALGARGLRV VVPHDVGLTI LKGAVLFGQA PGVVRVRRSP LTYGVGVLNR 651 700 ENSBTAP00000049735/1-657 FVAGVHPPDK LLVRDGRRWC TDVFERFVAA EQSVALGEEV RRSYCPARPG ENSP00000254963/1-686 FVPGRHPPEK LLVRDGRRWC TDVFERFVAA EQSVALGEEV RRSYCPARPG bmy_07681T0/1-758 FVAGRHPPDK LLVRDGRRWC TDVFERFVAA EQSVALGEEV LRSYCPARPG BACU019577/1-600 FVAGRHPPDK LLVRDGRRWC TDVFERFVAA EQSVALGEEV LRSYCPARPG 701 750 ENSBTAP00000049735/1-657 QRRVLINLYC CAAEDARFIT DPGVRKCGAL SLELEPAEGG PDAAGAPPGR ENSP00000254963/1-686 QRRVLINLYC CAAEDARFIT DPGVRKCGAL SLELEPADCG QDTAGAPPGR bmy_07681T0/1-758 QRRVLINLYC CAAEDARFIT DPGVRKCGAL SLELEPAEGG PHAAAAPPSR BACU019577/1-600 QRRVLINLYC CAAEDARFIT DPGVRKCGAL SLELEPAEGG PHAADAPPSR 751 800 ENSBTAP00000049735/1-657 REIRAAMQFG DTEIKVTAID VSTNRSVRAA IDFLSN ENSP00000254963/1-686 REIRAAMQFG DTEIKVTAVD VSTNRSVRAS IDFLSN bmy_07681T0/1-758 REIRTAMQFG DTEIKVTAVD VSTNRSVRAA IDFLSN BACU019577/1-600 REIRTAMQFG DTEIKVTAVD VSTNRSVRAA IDFLSN