KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:58:39 2014 Check: 00 .. Name: ENSP00000404911/1-384 Len: 390 Check: 2978 Weight: 1.00 Name: ENSBTAP00000048186/1-354 Len: 390 Check: 8059 Weight: 1.00 Name: bmy_00092T0/1-383 Len: 390 Check: 5856 Weight: 1.00 Name: ENSTTRP00000008910/1-332 Len: 390 Check: 2666 Weight: 1.00 Name: BACU019569/1-335 Len: 390 Check: 3135 Weight: 1.00 // 1 50 ENSP00000404911/1-384 MSVQNSGWPH QEDSPKPQDP GPPANSDSDS GHLPGED--- -PEDTHAQGP ENSBTAP00000048186/1-354 ---------- ---------- ---------- --MPKED--- -PEETSAQDP bmy_00092T0/1-383 --MEGGAW-- ---MLFQIGE EVAMKREGKK GKEGKAELCF SPFAAFPQDP ENSTTRP00000008910/1-332 MSLLNSGSPH RGERLTPPEP NPPVNSDSNP GHVPEED--- -PEETSAQDP BACU019569/1-335 MSLLNSGWPH RGERLTPPEP NPPVNSDSNP GHGPEED--- -PEETSAQDP 51 100 ENSP00000404911/1-384 AVLSLGSLCL DTNQAPNWTG LQTLLQQLPP QDIDERYCLA LGEEERAELQ ENSBTAP00000048186/1-354 EVLSWGHPGL DTTPAPSWPV LRSLLQQLPP QDSDERYCLA LGEEELAELR bmy_00092T0/1-383 EVLSLGNPGL DTNQAPSWPG LRTLLQQLPP QDSDERYCLA LGEEELAELR ENSTTRP00000008910/1-332 EVLSLGNPGL DINQAPSWPG LRTLLQQLPP QDSDERYCLA PGEEELAELR BACU019569/1-335 EVLSLGNPGL DTNQAPSWPG LRTLLQQLPP QDSDERYCLA LGEEELAELR 101 150 ENSP00000404911/1-384 LFCARRKQEA LGQGVARLVL PKLEGHTCEK CRELLKPGEY GVFAARAGEQ ENSBTAP00000048186/1-354 LFCAQRRREA LGQGVACLVP LKLEECTCEN CRERLRPGEY GVFAARAGER bmy_00092T0/1-383 LFCAQRRQEA LGQGVARLVP PKLEECTCEK CREQLRPGEY GVFAARAGEQ ENSTTRP00000008910/1-332 LFCAQRRREA LGQGVARLVP PKLEECTCEK CRERLRPGEY GVFTARAGEQ BACU019569/1-335 LFCAQRRREA LGQGVARLVP PKLEECTCEK CREQLRPGEY GVFAARAGEQ 151 200 ENSP00000404911/1-384 RCWHQPCFAC QACGQALINL IYFYHDGQLY CGRHHAELLR PRCPACDQLI ENSBTAP00000048186/1-354 RCWHRACFAC QACGQALINL IYFYHDGRLY CGRHHAELLR PRCPACDQLI bmy_00092T0/1-383 RCWHRACFAC QACGQALINL IYFYHDGRLY CGRHHAELLR PRCPACDQLI ENSTTRP00000008910/1-332 RCWHRACFAC QACGQALINL IYFYHDGRLY CGRHHAELLR PRCPACDQLI BACU019569/1-335 RCWHRACFAC QACGQALINL IYFYHDGRLY CGRHHAELLR PRCPACDQLI 201 250 ENSP00000404911/1-384 FSWRCTEAEG QRWHENHFCC QDCAGPLGGG RYALPGGSPC CPSCFENRYS ENSBTAP00000048186/1-354 FSRRCTEAEG RRWHENHFCC QDCAGPLGGG RYALPGGGPC CPSCFERRYS bmy_00092T0/1-383 FSRRCTEAEG RRWHENHFCC QDCAGPLGGG RYALPGGGPC CPSCFERRYS ENSTTRP00000008910/1-332 FSRRCTEAEG RRWHENHFCC QDCAGPLGGG RYALLGGGPC CPSCFERRYS BACU019569/1-335 FSRRCTEAEG RRWHENHFCC QDCAGPLGGG RYALPGGGPC CPSCFERRYS 251 300 ENSP00000404911/1-384 DAGSSWAGAL EGQAFLGETG LDRTEGRDQT SVNSATLSR- TLLAAAGGSS ENSBTAP00000048186/1-354 DVGSSPAPTL ESRASPGEEG LCRVGAPDCA QLNAATISRA TLLATAASSS bmy_00092T0/1-383 DAGSSPAPTV EGRASPGEAE LGGVEDWHRA PRNAAIISRA ALLSTAASSS ENSTTRP00000008910/1-332 DAGSSPAPTV EGRASPGEAE IGGFEDGHRA PRNAAIISRA ALLATAASSS BACU019569/1-335 DAGSSPAPTV EGRASPGEAE LGGIEDGHRA PRNAAIISRA AILSTAASSS 301 350 ENSP00000404911/1-384 LQTQRGLPGS SPQQENRPGD KAEAPKGQEQ CRLETIRDP- KDTPFSTCSS ENSBTAP00000048186/1-354 LETRTEMLGS SAEQEYRAGD QTEARQGQAQ GRLETPLDPK EDAPCPTCSS bmy_00092T0/1-383 LETQRGMLGS SPEQECRAGD QAETPKGQEQ GCPETPLDPK EDASCATCSS ENSTTRP00000008910/1-332 LETHRGMLGS SPEHECKA-D QEETP-GQEQ GCP-TPLDP- ---------- BACU019569/1-335 LETQRGTLGS SPEQECRAGD QAETPKGQEQ GCPETPLDP- ---------- 351 400 ENSP00000404911/1-384 SSDSEPEGFF LGERLPQSWK TPGSLQAEDS NASKTHCTMC ENSBTAP00000048186/1-354 SSESEPEGFF LGQRLPRPWE TPASLQTGYS DTSRRHCTIC bmy_00092T0/1-383 SSESEPEGFF LGQRLPRPWE TPGNLQAGDS DTSRKHCTIC ENSTTRP00000008910/1-332 ---------- ---------- ---------- ---------- BACU019569/1-335 ---------- ---------- ---------- ----------