KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:58:16 2014 Check: 00 .. Name: BACU008960/1-156 Len: 461 Check: 3912 Weight: 1.00 Name: ENSP00000354689/1-371 Len: 461 Check: 1045 Weight: 1.00 Name: ENSBTAP00000047569/1-423 Len: 461 Check: 7609 Weight: 1.00 Name: bmy_04130T0/1-401 Len: 461 Check: 5344 Weight: 1.00 Name: ENSTTRP00000013423/1-305 Len: 461 Check: 8322 Weight: 1.00 // 1 50 BACU008960/1-156 --MVPSQG-- ---------- ---------- --------TQ SRVNVCR--- ENSP00000354689/1-371 MPGCPCPGCG MAGPRLLFLT ALALELLERA GGSQPALRSR GTATACRLDN ENSBTAP00000047569/1-423 MPGCPCPGIG MAGQRLLFLA ALALELLGGA GGSQQALRSR GVAAACRLDS bmy_04130T0/1-401 MPGCPCPGCG MAGQRLLFLA AVALELLGGA GGSQQAFRSR GVAAACRLDN ENSTTRP00000013423/1-305 MPGCPCPGCG MAGQRLLFLA ALALELLGGA GGSQQAFRSR GVAAACRLDN 51 100 BACU008960/1-156 ---------- ---------- ---------- ---------- ---------- ENSP00000354689/1-371 KESESWGALL SGERLDTWIC SLLGSLMVGL SGVFPLLVIP LEMGTMLRSE ENSBTAP00000047569/1-423 KESESWGALL SGERLETWIC SLLGSLMVGL SGVFPLLVIP LEMGTTLRSE bmy_04130T0/1-401 KESESWGALL SGERLDTWIC SLLGSLMVGL SGVFPLLVIP LEMGTTLRSE ENSTTRP00000013423/1-305 KESESWGALL SGERLDTWIC SLLGSLMVGL SGVFPLLVIP LEMGTTLRSE 101 150 BACU008960/1-156 ---------- ---MSGQVGT LALSTEP--- ---------- ---------- ENSP00000354689/1-371 AGAWRLKQLL SFALGGLLGN VFLHLLPEAW AYTCSASPGG EGQSLQQQQQ ENSBTAP00000047569/1-423 AGARRLKQLL SFALGGLLGN VFLHLLPEAW AYTNSASSGG ERQSLQQQQQ bmy_04130T0/1-401 AGARRLKQLL SFALGGLLGN VFLHLLPEAW AYTYSASPGG EGQSLQQQQQ ENSTTRP00000013423/1-305 AGARRLKQLL SFALGGLLGN VFLHLLPEAW ACTYSASPGG EGQSLQQQQQ 151 200 BACU008960/1-156 ---------- ---------- ---------- -PDSLP---- ---------- ENSP00000354689/1-371 LGLWVIAGIL TFLALEKMFL DSKE-EGTSQ APNKDPTAAA AALNGGHCLA ENSBTAP00000047569/1-423 LGLWVIAGFL TFLVLEKLFF DSKGKEETSQ APSKDP-AAA AALNGGHYLA bmy_04130T0/1-401 LGLWVIAGFL TFLALEKMFL DSKEKEETSQ APSKDP-AAA AALSGGHHLA ENSTTRP00000013423/1-305 LGLWVIAGFL TFLALEKMFL DSKE-EETSQ APSKDP-AAA AALSGGHHLA 201 250 BACU008960/1-156 ---------- ---------- ---------- ---------- ---------- ENSP00000354689/1-371 QPAAEPGLGA VVRSIK---- ---------- ---------- ---------- ENSBTAP00000047569/1-423 QPAAEPGPSA VVRNIK---- ---------- ---------- ---------- bmy_04130T0/1-401 QPAAGPGLSA VVRSIKVSGP PRAPSSCSRP TPSGRPDSAL PARLNPAFSP ENSTTRP00000013423/1-305 QPAAGPGLSA VVRNIK---- ---------- ---------- ---------- 251 300 BACU008960/1-156 ---------- ---------- ---------- SLQIGLLTTM AILLHEIPHE ENSP00000354689/1-371 ---VSGYLNL LANTIDNFTH GLAVAASFLV SKKIGLLTTM AILLHEIPHE ENSBTAP00000047569/1-423 ---VSGYLNL LANTIDNFTH GLAVAASFLV SKKIGLLTTM AILLHEIPHE bmy_04130T0/1-401 LTQVSGYLNL LANTIDNFTH GLAVAASFLV SKKIGLLTTM AILLHEIPHE ENSTTRP00000013423/1-305 ---VSGYLNL LANTIDNFTH GLAVAASFLV SKKIGLLTTM AILLHEIPHE 301 350 BACU008960/1-156 VGSFAILLRA GFDRWSAAKL QLSTALGGLL GACFAICTQS PKGV------ ENSP00000354689/1-371 VGDFAILLRA GFDRWSAAKL QLSTALGGLL GAGFAICTQS PKGV------ ENSBTAP00000047569/1-423 VGDFAILLRA GFDRWSAAKL QLSTALGGLL GACFAICAQS PKGVGTGVGV bmy_04130T0/1-401 VGDFAILLRA GFDRWSAAKL QLSTALGGLL GACFAICTQS PKGV------ ENSTTRP00000013423/1-305 VSDFAILLRA GFDRWSAAKL QLSTALGGLL GACFAICTQS PKGV------ 351 400 BACU008960/1-156 ---------- ---------- ---------- ---------- ---------- ENSP00000354689/1-371 ---------- ---------- ---------- ---------- ------VGCS ENSBTAP00000047569/1-423 VAVRRGALAE GHGRPDPGIR ARLCSGPPRG MGGGRYTWPP SPPQPVRAPP bmy_04130T0/1-401 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013423/1-305 ---------- ---------- ---------- ---------- ---------- 401 450 BACU008960/1-156 ---EETVAWI LPFTSGGFLY IALVNVLPDL LEEDDPWRSL QQVLLLCTGI ENSP00000354689/1-371 PAAEETAAWV LPFTSGGFLY IALVNVLPDL LEEEDPWRSL QQLLLLCAGI ENSBTAP00000047569/1-423 PATEETVAWI LPFTSGGFLY IALVNVLPDL LEEDDPWRSL QQVLLLCAGI bmy_04130T0/1-401 ---EETVAWI LPFTSGGFLY IALVNVLPDL LEEDDPWRSL QQVLLLCMGI ENSTTRP00000013423/1-305 ---------- ---------- ---------- ---------- ---------- 451 500 BACU008960/1-156 VVMVLFSLFV E ENSP00000354689/1-371 VVMVLFSLFV D ENSBTAP00000047569/1-423 VVMVLFSVFV E bmy_04130T0/1-401 VVMVLFSLFV E ENSTTRP00000013423/1-305 ---------- -