KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:57:49 2014 Check: 00 .. Name: ENSTTRP00000002282/1-455 Len: 474 Check: 2961 Weight: 1.00 Name: ENSBTAP00000046932/1-455 Len: 474 Check: 7549 Weight: 1.00 Name: bmy_03415T0/1-458 Len: 474 Check: 4246 Weight: 1.00 Name: BACU003940/1-458 Len: 474 Check: 4050 Weight: 1.00 // 1 50 ENSTTRP00000002282/1-455 RAARQEPPES QPIPWPGLPA APRAGDCSCP CCASSSRAPP PSSLRYLSAT ENSBTAP00000046932/1-455 MAWSPRHSAG RRLQLPLL-- --------CL LLQGATAILF AVFVRYNRET bmy_03415T0/1-458 MAGSPRRTAG RRLQLPLL-- --------CL LLQGATAILF AVFVRYNDET BACU003940/1-458 MAGSPRRTAG RRLQLPLL-- --------CL LLQGATAILF AVFVRYNHET 51 100 ENSTTRP00000002282/1-455 TMKPTLPSGT GTTTVTRTMN FTFATQPRLF QDVHTMIFVG FGFLMVFLQR ENSBTAP00000046932/1-455 --DAALWHWG NHSNADNEFY FRYPS----F QDVHAMIFVG FGFLMVFLQR bmy_03415T0/1-458 --DAALWHWR NHSNADNEFY FRYPS----F QDVHTMIFVG FGFLMVFLQR BACU003940/1-458 --DAALWHWR NHSNADNEFY FRYPS----F QDVHTMIFVG FGFLMVFLQR 101 150 ENSTTRP00000002282/1-455 YGFSSVGFTF LSAAFALQWS TLVQGFFHSF HHGHIYVGVE SMINADFCAG ENSBTAP00000046932/1-455 YGFGSVGFTF LLAAFALQWS TLIQGFFHSF RGGYILVGME SMINADFCAG bmy_03415T0/1-458 YGFSSVGFTF LLAAFALQWS TLVQGFFHSF HGGHIHVGVE SMINADFCAG BACU003940/1-458 YGFSSVGFTF LLAAFALQWS TLVQGFFHSF HGGHIHVGIE SMINADFCAG 151 200 ENSTTRP00000002282/1-455 AVLISFGAIL GKTGPAQLLL MALLEVVLFG LNEFVLLSLL RVKDAGGSMT ENSBTAP00000046932/1-455 AVLISFGAVL GKTGPVQLLL MALLEVVLFG LNEFVLLSLL EVKDAGGSMT bmy_03415T0/1-458 AVLISFGAIL GKTGPAQLLL MALLEVVLFG LNEFVLLSLL GVKDAGGSMT BACU003940/1-458 AVLISFGAIL GKTGPAQLLL MALLEVVLFG LNEFVLLSLL GVKDAGGSMT 201 250 ENSTTRP00000002282/1-455 IHAFG-YFGL VLSRVLYRPQ LEKSKHRQGS VYHSDLFAMI GTIFLWIFWP ENSBTAP00000046932/1-455 IHTFGAYFGL ILSRVLYRPQ LEKSKHRQGS VYHSDLFAMI GTIFLWIFWP bmy_03415T0/1-458 IHTFGAYFGL VLSRVLYRPQ LEKSKHRQGS VYHSDLFAMI GTIFLWIFWP BACU003940/1-458 IHTFGAYFGL VLSRVLYRPQ LEKSKHRQGS VYHSDLFAMI GTIFLWIFWP 251 300 ENSTTRP00000002282/1-455 SFNSAPTALG DGQHRSALNT YYSLTASTLS TFALSALVGR DGRLDMVHIQ ENSBTAP00000046932/1-455 SFNSAPTALG DGQHRTALNT YYSLTASTLS TFALSALVGG DGRLDMVHVQ bmy_03415T0/1-458 SFNSAPTTLG DGQHRTALNT YYSLTASTLS TFALSALVGR DGRLDMVHVQ BACU003940/1-458 SFNSAPTTLG DGQHRTALNT YYSLTASTLS TFALSALVGR DGRLDMVHVQ 301 350 ENSTTRP00000002282/1-455 NAALAGGVVV GTSAEMMLTP FGALVAGFLA GTVSTLGYKF FTPTLESKLK ENSBTAP00000046932/1-455 NAALAGGVVV GTSAEMMLTP FGALAAGFLA GAISTLGYKF VTPILESKLK bmy_03415T0/1-458 NAALAGGVVV GTSAEMMLTP FGALVAGFLA GTVSTLGYKF FTPILESKLK BACU003940/1-458 NAALAGGVVV GTSAEMMLTP FGALVAGFLA GTVSTLGYKF FTPILESKLK 351 400 ENSTTRP00000002282/1-455 VQDTCGVHNL HGMPGVLGAL LGVLVAGLAT HEAYGDGLES VFPLLAKGQR ENSBTAP00000046932/1-455 VQDTCGVHNL HGMPGVLGAL LGGLVAGLAT REAYGDGLES VFPLIAEGQR bmy_03415T0/1-458 VQDTCGVHNL HGMPGVLGAL LGVLVAGLAT HEAYGDGLES VFPLLAKGQR BACU003940/1-458 VQDTCGVHNL HGMPGVLGAL LGVLVAGLAT HEAYGDGLES VFPLLAKGQR 401 450 ENSTTRP00000002282/1-455 SATSQAMHQL FGLFVTLIFA SVGGSLGGLL LRLPFLDSPR LP-------V ENSBTAP00000046932/1-455 SATSQAMHQL FGLFVTLTFA SVGGGLGGLL LRLPILDSPP DSQCYEDQIY bmy_03415T0/1-458 SATSQAMHQL FGLFVTLIFA SVGGSLGGLL LRLPFLDSPP DSQCYKDQIY BACU003940/1-458 SASSQAMHQL FGLFVTLIFA SVGGSLGGLL LRLPFLDSPP DSQCYEDQIY 451 500 ENSTTRP00000002282/1-455 LRGPG----L LGGAWGA--- ---- ENSBTAP00000046932/1-455 WEVPGEHEHL AQG---SEET ETQA bmy_03415T0/1-458 WEVPGEHEDL AQGPLRAEEP ETRA BACU003940/1-458 WEVPGEHEDL AQGPLRAEEP ETRA