KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:09 2014 Check: 00 .. Name: ENSTTRP00000011559/1-594 Len: 707 Check: 186 Weight: 1.00 Name: ENSP00000296577/1-599 Len: 707 Check: 1161 Weight: 1.00 Name: ENSBTAP00000045734/1-599 Len: 707 Check: 501 Weight: 1.00 Name: bmy_03469T0/1-707 Len: 707 Check: 9251 Weight: 1.00 Name: BACU013551/1-579 Len: 707 Check: 2843 Weight: 1.00 // 1 50 ENSTTRP00000011559/1-594 ---------- ---------- ---------- ---------- ---------- ENSP00000296577/1-599 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000045734/1-599 ---------- ---------- ---------- ---------- ---------- bmy_03469T0/1-707 MTSVPAVSPY LPPGLRPARP VAHAHYVXVA CVRRRLGIAI LAGGRRNTLC BACU013551/1-579 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000011559/1-594 ---------- ---------- -----MADKL TRIAIVNHDK CKPKKCRQEC ENSP00000296577/1-599 ---------- ---------- -----MADKL TRIAIVNHDK CKPKKCRQEC ENSBTAP00000045734/1-599 ---------- ---------- -----MADKL TRIAIVNHDK CKPKKCRQEC bmy_03469T0/1-707 GREVKARTDL ASAFPSARGI CFSRIMADKL TRIAIVNHDK CKPKKCRQEC BACU013551/1-579 ---------- ---------- -----MADKL TRIAIVNHDK CKPKKCRQEC 101 150 ENSTTRP00000011559/1-594 KKSCPVVRMG KLCIEVVPQS KIAWISETLC IGCGICIKXX XXXXXXXXXL ENSP00000296577/1-599 KKSCPVVRMG KLCIEVTPQS KIAWISETLC IGCGICIKKC PFGALSIVNL ENSBTAP00000045734/1-599 KKSCPVVRMG KLCIEVTAQS KIAWISETLC IGCGICIKKC PFGALSIVNL bmy_03469T0/1-707 KKCCPVVRMG KLCIEVVCQS KIAWISETLC IGCGICIKKC PFGALSIVNL BACU013551/1-579 KKCCPVVRMG KLCIEVVSQS KIAWISETLC IGCGICIKKC PFGALSIVNL 151 200 ENSTTRP00000011559/1-594 PS--LEETTH RYCANAFKLH RLPIPRPGEV LGLVGTNGIG KSTALKILAG ENSP00000296577/1-599 PSNLEKETTH RYCANAFKLH RLPIPRPGEV LGLVGTNGIG KSTALKILAG ENSBTAP00000045734/1-599 PSNLEKETTH RYCANAFKLH RLPIPRPGEV LGLVGTNGIG KSTALKILAG bmy_03469T0/1-707 PSNLEKETTH RYCANAFKLH RLPIPRPGEV LGLVGTNGIG KSTALKILAG BACU013551/1-579 PSNLEKETTH RYCANAFKLH RLPIPRPGEV LGLVGTNGIG KSTALKILAG 201 250 ENSTTRP00000011559/1-594 KQKPNLGKYD DPPDWQEILT YFRGSELQNY FTKILEDDLK AIIKPQYVDQ ENSP00000296577/1-599 KQKPNLGKYD DPPDWQEILT YFRGSELQNY FTKILEDDLK AIIKPQYVDQ ENSBTAP00000045734/1-599 KQKPNLGKYD DPPDWQEILT YFRGSELQNY FTKILEDDLK AIIKPQYVDQ bmy_03469T0/1-707 KQKPNLGKYD DPPDWQEILT YFRGSELQNY FTKILEDDLK AIIKPQYVDQ BACU013551/1-579 KQKPNLGKYD DPPDWQEILT YFRGSELQNY FTKILEDDLK AIIKPQYVDQ 251 300 ENSTTRP00000011559/1-594 IPKAAKGTVG CILDRKDETK TQAIVCH--- LTHLKERNVE DLSGGELQRF ENSP00000296577/1-599 IPKAAKGTVG SILDRKDETK TQAIVCQQLD LTHLKERNVE DLSGGELQRF ENSBTAP00000045734/1-599 IPKAAKGTVG SILDRKDETK TQAIVCQQLD LTHLKERNVE DLSGGELQRF bmy_03469T0/1-707 IPKAAKGTVG SILDRKDETK SQAVVCQQLD LTHLKERNVE DLSGGELQRF BACU013551/1-579 IPKAAKGTVG SILDRKDETK SQAVVCQQLD LTHLKERNVE DLSGGELQRF 301 350 ENSTTRP00000011559/1-594 ACAVVCIQKA DIFMFDEPSS YLDVKQRLKA AITIRSLINP DRYIIVVEHD ENSP00000296577/1-599 ACAVVCIQKA DIFMFDEPSS YLDVKQRLKA AITIRSLINP DRYIIVVEHD ENSBTAP00000045734/1-599 ACAVVCIQKA DIFMFDEPSS YLDVKQRLKA AITIRSLINP DRYIIVVEHD bmy_03469T0/1-707 ACAVVCIQKA DILMFDEPSS YLDVKQRLKA AITIRSLINP DRYIIVVEHD BACU013551/1-579 ACAVVCIQKA DILMFDEPSS YLDVKQRLKA AITIRSLINP DRYIIVVEHD 351 400 ENSTTRP00000011559/1-594 LSVLDYLSDF ICCLYGVPSA YGVVTMPFSV REGINIFLDG YVPTENLRFR ENSP00000296577/1-599 LSVLDYLSDF ICCLYGVPSA YGVVTMPFSV REGINIFLDG YVPTENLRFR ENSBTAP00000045734/1-599 LSVLDYLSDF ICCLYGVPSA YGVVTMPFSV REGINIFLDG YVPTENLRFR bmy_03469T0/1-707 LSVLDYLSDF ICCLYGVPSA YGVVTMPFSV REGINIFLDG YVPTENLRFR BACU013551/1-579 LSVLDYLSDF ICCLYGVPSA YGVVTMPFSV REGINIFLDG YVPTENLRFR 401 450 ENSTTRP00000011559/1-594 DASLVFKVAE TANEEEVKKM CMYKYPGMKK KMGEFELAIV AGEFTDSEIM ENSP00000296577/1-599 DASLVFKVAE TANEEEVKKM CMYKYPGMKK KMGEFELAIV AGEFTDSEIM ENSBTAP00000045734/1-599 DASLVFKVAE TANEEEVKKM CMYKYPGMKK KMGEFELAIV AGEFTDSEIM bmy_03469T0/1-707 DSSLVFKVAE TANEEEVKKM CMYKYPGMKK KMGEFELAIV AGEFTDSEIM BACU013551/1-579 DSSLVFKVAE TANEEEVKKM CMYKYPGMKK KMGEFELAIV AGEFTDSEIM 451 500 ENSTTRP00000011559/1-594 VMLGENGTGK TTFIRMLAGR LKPDEG---- ---------- ---------- ENSP00000296577/1-599 VMLGENGTGK TTFIRMLAGR LKPDEG---- ---------- ---------- ENSBTAP00000045734/1-599 VMLGENGTGK TTFIRMLAGR LKPDEG---- ---------- ---------- bmy_03469T0/1-707 VMLGENGTGK TTFIRMLAGR LKPDEGGTIV ILSLFTLFHV VNFEDLGRFQ BACU013551/1-579 VMLGEN---- ---------- ---------- ---------- ---------- 501 550 ENSTTRP00000011559/1-594 ---------G EVPVLNVSYK PQKISPKSTG SVRQLLHEKI RDAYTHPQFV ENSP00000296577/1-599 ---------G EVPVLNVSYK PQKISPKSTG SVRQLLHEKI RDAYTHPQFV ENSBTAP00000045734/1-599 ---------G EVPVLNVSYK PQKISPKSTG SVRQLLHEKI RDAYTHPQFV bmy_03469T0/1-707 CLIYLHYFAG EVPVLNVSYK PQKISPKSTG SVRQLLHEKI RDAYTHPQFV BACU013551/1-579 ---------G EVPVLNVSYK PQKISPKSTG SVRQLLHEKI RDAYTHPQFV 551 600 ENSTTRP00000011559/1-594 TDVMKPLQIE NIIDQEVQTL SGGELQRVAL ALCLGKPADV YLIDEPSAYL ENSP00000296577/1-599 TDVMKPLQIE NIIDQEVQTL SGGELQRVAL ALCLGKPADV YLIDEPSAYL ENSBTAP00000045734/1-599 TDVMKPLQIE NIIDQEVQTL SGGELQRVAL ALCLGKPADV YLIDEPSAYL bmy_03469T0/1-707 TDVMKPLQIE NIIDQEVQTL SGGELQRVAL ALCLGKPADV YLIDEPSAYL BACU013551/1-579 TDVMKPLQIE NIIDQEVQTL SGGELQRVAL ALCLGKPADV YLIDEPSAYL 601 650 ENSTTRP00000011559/1-594 DSEQRLMAAR VVKRFILHAK KTAFVVEHDF IMATYLADRV IVFDGVPSKN ENSP00000296577/1-599 DSEQRLMAAR VVKRFILHAK KTAFVVEHDF IMATYLADRV IVFDGVPSKN ENSBTAP00000045734/1-599 DSEQRLMAAR VVKRFILHAK KTAFVVEHDF IMATYLADRV IVFDGVPSKN bmy_03469T0/1-707 DSEQRLMAAR VVKRFILHAK KTAFVVEHDF IMATYLADRV IVFDGVPSKN BACU013551/1-579 DSEQRLMAAR VVKRFILHAK KTAFVVEHDF IMATYLADRV IVFDGVPSKN 651 700 ENSTTRP00000011559/1-594 TLANSPQTLL AGMNKFLSQL EITFRRDPNN YRPRINKLNS IKDVEQKKSG ENSP00000296577/1-599 TVANSPQTLL AGMNKFLSQL EITFRRDPNN YRPRINKLNS IKDVEQKKSG ENSBTAP00000045734/1-599 TVANSPQTLL AGMNKFLSQL EITFRRDPNN YRPRINKLNS IKDVEQKKSG bmy_03469T0/1-707 TVANSPQTLL AGMNKFLSQL EITFRRDPNN YRPRINKLNS IKDVEQKKSG BACU013551/1-579 TVANSPQTLL AGMNKFLSQL EITFRRDPNN YRPRINKLNS IKDVEQKKSG 701 750 ENSTTRP00000011559/1-594 NYFFLDD ENSP00000296577/1-599 NYFFLDD ENSBTAP00000045734/1-599 NYFFLDD bmy_03469T0/1-707 NYFFLDD BACU013551/1-579 NYFFLDD