KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 17:56:59 2014  Check: 00 ..

 Name: ENSP00000357311/1-88      Len:    104  Check:  2125  Weight:  1.00
 Name: ENSBTAP00000045477/1-88   Len:    104  Check:  2449  Weight:  1.00
 Name: bmy_13846T0/1-92          Len:    104  Check:  3275  Weight:  1.00
 Name: ENSTTRP00000014282/1-100  Len:    104  Check:  7130  Weight:  1.00

//


                          1                                                   50
ENSP00000357311/1-88      MALSTIVSQR KQIKRKAPRG FLKRVFKRKK PQLRLEKSGD LL-------- 
ENSBTAP00000045477/1-88   MALSTTVSQR KMIRRKAPRG FLKRIFKRQK PHLRLETSSD LL-------- 
bmy_13846T0/1-92          MALSTTVSQR KLIKRKAPRG FLKRVFKQRK PHLRLETNSD LL-------- 
ENSTTRP00000014282/1-100  MALSTTVSQK KLIKRKAPRG FLKRVFKQRK PHLRLETNSD LLVRFCPFDW 


                          51                                                 100
ENSP00000357311/1-88      ----VHLNCL LFVHRLAEES RTNACASKCR VINKEHVLAA AKVILKKSRG 
ENSBTAP00000045477/1-88   ----VHLNCL LFVHRLAEES RINACGSKCG VIKKEHVLAA AKVILKKSRG 
bmy_13846T0/1-92          ----VHLNCL LLVHRLAEEA RTNACENKCG VIKKEHVLAA AKVILKKSRG 
ENSTTRP00000014282/1-100  KWGEVHLNCL LFVHRLAEEA RTNACENKCG VIKKEHVLAA AKVILKKSRG 


                          101                                                150
ENSP00000357311/1-88      ---- 
ENSBTAP00000045477/1-88   ---- 
bmy_13846T0/1-92          GNRS 
ENSTTRP00000014282/1-100  ----