KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:56:16 2014 Check: 00 .. Name: ENSP00000446485/1-167 Len: 378 Check: 6076 Weight: 1.00 Name: ENSTTRP00000004212/1-167 Len: 378 Check: 3542 Weight: 1.00 Name: ENSBTAP00000044649/1-167 Len: 378 Check: 5018 Weight: 1.00 Name: bmy_04716T0/1-332 Len: 378 Check: 729 Weight: 1.00 Name: BACU008103/1-286 Len: 378 Check: 274 Weight: 1.00 // 1 50 ENSP00000446485/1-167 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004212/1-167 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044649/1-167 ---------- ---------- ---------- ---------- ---------- bmy_04716T0/1-332 MANCKYNACH VVSIKRLKEH EANCVNRPAI DNEPFNLPKX TSPSLKPSEK BACU008103/1-286 MANCKYNACH VVPVKRLKEH EANCVNRTAI DNEPFNLPKV TSPSLEPSEK 51 100 ENSP00000446485/1-167 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004212/1-167 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000044649/1-167 ---------- ---------- ---------- ---------- ---------- bmy_04716T0/1-332 FSDAANQIPD PDVWNV---- ---------- ---------- ---------- BACU008103/1-286 FSDAANQIPD PDVWNVDNTH HSPSFVLKTF APKMLVCESD SRDIKKETTD 101 150 ENSP00000446485/1-167 ---------- ---------- --MEETY--- ---------- -TDSLDPEKL ENSTTRP00000004212/1-167 ---------- ---------- --MEETY--- ---------- -IDTLDPEKL ENSBTAP00000044649/1-167 ---------- ---------- --MEETY--- ---------- -IDTLDPEKL bmy_04716T0/1-332 ---------- --ALGFGSFI SNMEDTYSFL KFGAQPGHFA ELDTLDPEKL BACU008103/1-286 DKHPNNHKSR KKALGFGSFI SNMEDTY--- ---------- -IDTLDPEKL 151 200 ENSP00000446485/1-167 LQCPYDKNHQ IRACRFPYHL IKCRKNHPDV ASKLATCPFN ARHQVPRAEI ENSTTRP00000004212/1-167 LQCPYDKNHQ IRACRFPYHL IKCRKNHPDI ANKLATCPFN ARHQVPRAEI ENSBTAP00000044649/1-167 LQCPYDKNHQ IRACRFPYHL IKCRKNHPDV ANKLATCPFN ARHQVPRAEI bmy_04716T0/1-332 LQCPYDKNHQ IRACRFPYHL IKCRKNHPDV ADKLATCPFN ARHQVPRAEI BACU008103/1-286 LQCPYDKNHQ IRACRFPYHL IKCRKNHPDV ADKLATCPFN ARHQVPRAEI 201 250 ENSP00000446485/1-167 SHHISSCDDR SCIEQDVVNQ TRSLRQETLA ESTWQCPPCD EDWDKDLWEQ ENSTTRP00000004212/1-167 SHHISSCDDK SCIEQDVVSQ TRNLGQEALA ESTWRCPPCD EDWDKDLWEQ ENSBTAP00000044649/1-167 SHHISSCDDK SCIEQDVVNQ TRSLGQETMA ESTWRCPPCD EDWDKDLWEQ bmy_04716T0/1-332 SHHISSCDDK SCIEQDVVSQ TRNLGQETLT ESTWQCPPCD EDWDKDLWEE BACU008103/1-286 SHHISSCDDK SCIEQDVVSQ TRNLGQETLT ESTWQCPPCD EDWDKDLWEQ 251 300 ENSP00000446485/1-167 TSTPFVWGTT HYSDNNSPAS NIVTEHKNNL ASGMRVPKSL PYVLPWKNNG ENSTTRP00000004212/1-167 TSTPFVWGEA NYCGNNSPAS NIVMEHKSNL ASGMRVPKSL PYVLPWKNNG ENSBTAP00000044649/1-167 TSTPFVWGTA NYCGNNSPAS NIVMEHKSNL ASGMRVPKSL PYVLPWKNNG bmy_04716T0/1-332 TSTPFVWGAA TYCGNNSPAS NIVMEHKSNL ASGMRVPKSL PYVLPWKNRG BACU008103/1-286 TSTPFVWGAA TYCGNNSPAS NIVMEHKSNL ASGMRVPKSL PYVLPWKNSK 301 350 ENSP00000446485/1-167 NAQ------- ---------- ---------- ---------- ---------- ENSTTRP00000004212/1-167 NAQ------- ---------- ---------- ---------- ---------- ENSBTAP00000044649/1-167 NAQ------- ---------- ---------- ---------- ---------- bmy_04716T0/1-332 NHPXFSRHNI DRELGLEIGL QGPKRCQTLE DSLLLPATLE IVLAVKPGVD BACU008103/1-286 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000446485/1-167 ---------- ---------- -------- ENSTTRP00000004212/1-167 ---------- ---------- -------- ENSBTAP00000044649/1-167 ---------- ---------- -------- bmy_04716T0/1-332 CVGVKIGMER RNQCTCGEEI GFSTVCEI BACU008103/1-286 ---------- ---------- --------