KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:56:14 2014 Check: 00 .. Name: ENSP00000289805/1-424 Len: 429 Check: 8470 Weight: 1.00 Name: ENSBTAP00000044617/1-409 Len: 429 Check: 997 Weight: 1.00 Name: ENSTTRP00000004149/1-392 Len: 429 Check: 9250 Weight: 1.00 Name: bmy_14294T0/1-370 Len: 429 Check: 5346 Weight: 1.00 Name: BACU018893/1-405 Len: 429 Check: 5602 Weight: 1.00 // 1 50 ENSP00000289805/1-424 MGSSSLSEDY RQCLERELRR GRAGVCGDPS LRAVLWQILV EDFDLHGALQ ENSBTAP00000044617/1-409 MGSSSLSEDY RLCLERELRR GRAGVCGDPS LRAVLWHILV EDFDLHGALQ ENSTTRP00000004149/1-392 ----SLSEDY RLCLERELRH GRAGVCGDPS LRAVLWHILV EDFDLHGALQ bmy_14294T0/1-370 MGSSSLSEDY RLCLERELRH GRAGVCGDPS LRAVLWHILV EDFDLHGALQ BACU018893/1-405 MGSSSLSEDY RLCLERELRH GRAGVCGDPS LRAVLWHILV EDFDLHGALQ 51 100 ENSP00000289805/1-424 DDALALLTDG LWGRADLAPA LRGLARAFEL LELAAVHLYL LPWRKEFTTI ENSBTAP00000044617/1-409 DDALALLTDG LWGRADLAPA LRGLARAFEL LELAAVHLYL LPWRKEFTTI ENSTTRP00000004149/1-392 DDALALLTDG LWGRADLAPA LRGLARAFEL LELAAVHLYL LPWRKEFTTI bmy_14294T0/1-370 DDALALLTDG LWGRADLAPA LRGLARAFEL LELAAVHLYL LPWRKEFTTI BACU018893/1-405 DDALALLTDG LWGRADLAPA LRGLARAFEL LELAAVHLYL LPWRKEFTTI 101 150 ENSP00000289805/1-424 KTFSGGYVHV LKGVLSDDLL LKSFQKMGYV RRDSHRLMVT ALPPACQLVQ ENSBTAP00000044617/1-409 KTFSGGYVHV LKGALSEDLL IQSFQKMGYV RRDAHRLMVA ALPPARQLVQ ENSTTRP00000004149/1-392 KTFSGGYVHV LKGALSEDLL IQSFQKMGYV RRDDHRLMVA ALPPARQLVQ bmy_14294T0/1-370 KTFSGGYVHV LKGALSEDLL IQSFQKMGYV RRDDHRLMVA APPPARQLVQ BACU018893/1-405 KTFSGGYVHV LKGALSEDLL IQSFQKMGYV RRDDHRLMVA APPPARQLVQ 151 200 ENSP00000289805/1-424 VALGCFALRL ECEILGEVLA QLGTSVLPAE ELLQARRASG DVASCVAWLQ ENSBTAP00000044617/1-409 VALGCFALRL ECEILGEVLA QLGTSVLPAE ELLQARRASV DVASCVAWLQ ENSTTRP00000004149/1-392 VALGCFALRL ECEILGEVLA QLGTSMLPAE ELLQARRASA DVASCVAWLQ bmy_14294T0/1-370 VALGCFALRL ECEILGEVLA QLGTSVLPAE ELLQARRASA DVASCVAWLQ BACU018893/1-405 VALGCFALRL ECEILGEVLA QRGTSVRPAE ELLQARRASA DVASCVAWLQ 201 250 ENSP00000289805/1-424 QRLAQDEEPP PLPPRGSPAA YRAPLDLYRD LQEDEGSEDA SLYGEPSPGP ENSBTAP00000044617/1-409 QRLAREEEPP PLPRRGSPTG CQARLDLYRD VQEDEGSDEA SLYGGPSPGP ENSTTRP00000004149/1-392 QRLAREEEPP PVPPRGSPAR CQARLDLYRD LQEDEGSDET SLYGGPSPGP bmy_14294T0/1-370 QRLAREEEPP PVPPR----- ---------- ---------- ---------- BACU018893/1-405 QRLAREEEPP PVPPRGSPAR CQARLDLYRD LQEDEGSDET SLYGGPSPGP 251 300 ENSP00000289805/1-424 DSPPAELAYR PPLWEQSAKL WGTGGRAWEP PAEELPQASS PPYGALEEGL ENSBTAP00000044617/1-409 DSPTSELACQ PRFWEQSARL WGAGGGPWEP -----AEVSS PTSGASEEE- ENSTTRP00000004149/1-392 DSPPSELACQ PLFWEQSARL WGVGGGAWE- -----AEASS P---ASEE-- bmy_14294T0/1-370 DSPPAELACQ PLFWEQSARL WGVGGGAWE- -----AEASS P---ASEE-- BACU018893/1-405 DSPPTELACQ PLFWEQSARL WGVGGGAWE- -----AEASS P---ASEE-- 301 350 ENSP00000289805/1-424 EPEPSAFSFL SLRRE-LSRP GDLATPESSA A---ASPRRI RAEGVPASAY ENSBTAP00000044617/1-409 EPQPEAFSFL SLRRELLSRP GDLAPPHAPR SPEQASPPPI ---------- ENSTTRP00000004149/1-392 EPEAEAFSLL SLRQELLSRP GDLAAPQAPG A---APAPHV ---------- bmy_14294T0/1-370 EPEAEVFSLL SLRQELLSRP GDLAAPQAPG TPEQASPRRV ---------- BACU018893/1-405 EPEAEVFSFL SLRQELLSRP GDLAASQAPG TPEQASPRRV ---------- 351 400 ENSP00000289805/1-424 RSVSEPPGYQ AHSCLSPGAL PTLCCDTCRQ LHAAHCAALP ACRPGHSLRV ENSBTAP00000044617/1-409 ---PEPPGYQ MHTCLAPGAL PALCCDTCRQ LHAAHCAALP SCHPGHSLRT ENSTTRP00000004149/1-392 ---PEPPGYQ THSCLGPGAL PTLCCDTCRQ LHTSHCATLA TCRPGHPLRA bmy_14294T0/1-370 ---PEPPGYQ THSCLGPGAL PALCCDTCRQ LHTAHCVALA TCRPGHPLRA BACU018893/1-405 ---PEPPGSQ THSCLGPGAL PALCCDTCRQ LHTAHCAALA TCRPGHPLRA 401 450 ENSP00000289805/1-424 LLGDAQRRLW LQRAQMDTLL YNSP-GARP ENSBTAP00000044617/1-409 LRGNSQRRLW LQRAQVDALL YDSP-AAGP ENSTTRP00000004149/1-392 LHGNHQRRLW LQRAQVDTLL YC------P bmy_14294T0/1-370 LHGNHQRRLW LQRAQVDALL YDAPRPAWP BACU018893/1-405 LHGNHQRRLW LQRAQVDALL YDAPRPAWP