KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:55:49 2014 Check: 00 .. Name: ENSTTRP00000015476/1-694 Len: 699 Check: 2094 Weight: 1.00 Name: ENSBTAP00000044207/1-669 Len: 699 Check: 6701 Weight: 1.00 Name: ENSP00000225388/1-695 Len: 699 Check: 4538 Weight: 1.00 Name: bmy_00130T0/1-676 Len: 699 Check: 9122 Weight: 1.00 Name: BACU010490/1-696 Len: 699 Check: 5538 Weight: 1.00 // 1 50 ENSTTRP00000015476/1-694 -MEXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000044207/1-669 ---------- ---------- -------QHN PKFHKHFYFF NRWNLARQHN ENSP00000225388/1-695 MEEKPGQPQP QHHHSHHHPH HHP-QQQQQQ PHHHHHYYFY NHSHNHHHHH bmy_00130T0/1-676 MEEKPSQPQS QHHHNHHHPH HHPQQQQQQQ PHHHHHYYFY NHNHNHHHHH BACU010490/1-696 MEEKPSQPQS QHHHNHHHPH HHPQQQQQQQ SHHHHHYYFY NHSHNHHHHH 51 100 ENSTTRP00000015476/1-694 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXYGELNG ENSBTAP00000044207/1-669 PHYKDQEYLQ HGAEGSPKAQ PKPLKHEQKH ALQQHQETPK KKTGYGELNG ENSP00000225388/1-695 HHQQPHQYLQ HGAEGSPKAQ PKPLKHEQKH TLQQHQETPK KKTGYGELNG bmy_00130T0/1-676 HHQQPHQYLQ HGAEGSPKAQ PKPLKHEQKH ALQQHQETPK KKT------- BACU010490/1-696 HHQQPHQYLQ HGAEGSPKAQ PKPLKHEQKH ALQQHQETPK KKTGYGELNG 101 150 ENSTTRP00000015476/1-694 NAGEREISLK NLGSDEATNP ISRVLNGNQQ VVDTNLKQTV KSSTFGKAGI ENSBTAP00000044207/1-669 NAGEREISLK SLGSEEATNP ISRVLNGNQQ VVDTNLKQTV KSSTFGKAGI ENSP00000225388/1-695 NAGEREISLK NLSSDEATNP ISRVLNGNQQ VVDTSLKQTV KANTFGKAGI bmy_00130T0/1-676 ---------- ------ATNP ISRVLNGNQQ VVDTNLKQTV KSITFGKAGI BACU010490/1-696 NAGEREISLK NLGSDEATNP ISRVLNGNQQ VVDTNLKQTV KSITFGKAGI 151 200 ENSTTRP00000015476/1-694 KTRNFIQKNS MDKKNGKSYE NKSGENQSVD KTDTVAIPNG VVTNNSGYIA ENSBTAP00000044207/1-669 KTRNFIQKNS MDKKNGKSYE NKSGENQSID KTDTVAIPNG VVTNNSGYIT ENSP00000225388/1-695 KTKNFIQKNS MDKKNGKSYE NKSGENQSVD KSDTIPIPNG VVTNNSGYIT bmy_00130T0/1-676 KTRNFIQKNS MDKKNGKSYE NKSGENQSVD KTDTVAIPNG VVTNNSGYIA BACU010490/1-696 KTRNFIQKNS MDKKNGKSYE NKSGENQSVD KTDTVAIPNG VVTNNSGYIA 201 250 ENSTTRP00000015476/1-694 NGYMGKGADN DGSVSESGYT TPKKRKARRN SAKGCENLNL VQD-IMQQET ENSBTAP00000044207/1-669 NGYMGKGADN DGSGSESGYT TPKKRKARRN SAKGCENLNL VQDKIMQQET ENSP00000225388/1-695 NGYMGKGADN DGSGSESGYT TPKKRKARRN SAKGCENLNI VQDKIMQQET bmy_00130T0/1-676 NGYMGKGADN DGSGSESGYT TPKKRKARRN SAKGCENLNL VQDKIMQQET BACU010490/1-696 NGYMGKGADN DGSGSESGYT TPKKRKARRN SAKGCENLNL VQDKIMQQET 251 300 ENSTTRP00000015476/1-694 NVPXXXXXXX XXXXXXXXXX XXXXXXSKPI WKYETGPGGS SRGKRAVGDM ENSBTAP00000044207/1-669 NVPTLKQGLE TFKPDYSEQK GNRVDGSKPI WKYETGPGGT SRGKPAVGDM ENSP00000225388/1-695 SVPTLKQGLE TFKPDYSEQK GNRVDGSKPI WKYETGPGGT SRGKPAVGDM bmy_00130T0/1-676 NVPTLKQGLE TFKPDYSEQK GNRVDGSKPI WKYETGPGGT SRGKPAVGDM BACU010490/1-696 NVPTLKQGLE TFKPDYSEQK GNRVDGSKPI WKYETGPGGT SRGKPAVGDM 301 350 ENSTTRP00000015476/1-694 LRKSSDIKRG VSSKKFDDRR KGKHTSAVAS KEDSWTLFKP PPVFPVDNSS ENSBTAP00000044207/1-669 LRKSSDIKPG VSSKKFDDRP KGKHTSAVAS KEDSWTLFKP PPVFPVDNSS ENSP00000225388/1-695 LRKSSDSKPG VSSKKFDDRP KGKHASAVAS KEDSWTLFKP PPVFPVDNSS bmy_00130T0/1-676 LRKSSDIKPG VSSKKFDDRP KGKHTSAVAS KEDSWTLFKP PPVFPVDNSS BACU010490/1-696 LRKSSDIKPG VSSKKFDDRP KGKHTSAVAS KEDSWTLFKP PPVFPVDNSS 351 400 ENSTTRP00000015476/1-694 AKIVPKISYA SKVKENLNKT VQNSSVSPSS SSSSSSSTGE TQTQSSSRLS ENSBTAP00000044207/1-669 AKIVPKISYA SKVKENLNKT VQNSSVSPSS SSSSSSSTGE TQTQASSRLS ENSP00000225388/1-695 AKIVPKISYA SKVKENLNKT IQNSSVSPTS SSSSSSSTGE TQTQSSSRLS bmy_00130T0/1-676 AKIVPKISYA SKVKENLNKT VQNSSVSPSS SSSSSSSTGE TQTQSSSRLS BACU010490/1-696 AKIVPKISYA SKVKENLNKT VQNSSVSPSS SSSSSSSTGE TQTQSSSRLS 401 450 ENSTTRP00000015476/1-694 QVPMSALKSV TSASFSNGPV LAGTDASVYS PGGQPLLTTA ANTLTPISSG ENSBTAP00000044207/1-669 QVPMSALKSV TSASFSNGPV LAGTDASVYS PGGQPLLTTA ANTLTPISSG ENSP00000225388/1-695 QVPMSALKSV TSANFSNGPV LAGTDGNVYP PGGQPLLTTA ANTLTPISSG bmy_00130T0/1-676 QVPMSALKSV TSASFSNGPV LAGTDASVYS PGGQPLLTTA ANTLTPISSG BACU010490/1-696 QVPMSALKSV TSASFSNGPV LAGTDASVYS PGGQPLLTTA ANTLTPISSG 451 500 ENSTTRP00000015476/1-694 TDSVLQDMSL TSAAVEQIKS SLFIYPSNMQ TVLLSTAQVD LPSQTDQQNL ENSBTAP00000044207/1-669 TDSVLQDMSL TSAAVEQIKS SLFIYPSNMQ TVLLSTAQVD LPSQTDQQNL ENSP00000225388/1-695 TDSVLQDMSL TSAAVEQIKT SLFIYPSNMQ TMLLSTAQVD LPSQTDQQNL bmy_00130T0/1-676 TDSVLQDMSL TSAAVEQIKS SLFIYPSNMQ TVLLSTAQVD LPSQTDQQNL BACU010490/1-696 TDSVLQDMSL TSAAVEQIKS SLFIYPSNMQ TVLLSTAQVD LPSQTDQQNL 501 550 ENSTTRP00000015476/1-694 GDIFQNQWGL SFINEPSAGP ETVIGKSSDH KVMEVTFQGE YPATLVSQGA ENSBTAP00000044207/1-669 GDIFQNQWGL SFINEPSAGP ETVTGKSSDH KVMEVTFQGE YPATLVSQGA ENSP00000225388/1-695 GDIFQNQWGL SFINEPSAGP ETVTGKSSEH KVMEVTFQGE YPATLVSQGA bmy_00130T0/1-676 GDIFQNQWGL SFINEPSAGP ETVIGKSSDH KVMEVTFQGE YPATLVSQGA BACU010490/1-696 GDIFQNQWGL SFINEPSAGP ETVIGKSSDH KVMEVTFQGE YPATLVSQGA 551 600 ENSTTRP00000015476/1-694 EIIPSGTEHP VFPKAYELEK RTSPQVLGSI LKSGTTSESG ALSLEPSHIG ENSBTAP00000044207/1-669 EIIPSGTEHP VFPKAYELEK RTSPQVLGSI LKSGTTNESG ALSLEPSHIG ENSP00000225388/1-695 EIIPSGTEHP VFPKAYELEK RTSPQVLGSI LKSGTTSESG ALSLEPSHIG bmy_00130T0/1-676 EIIPSGSEHP VFPKAYELEK RTSPQVLGSI LKSGTTSESG ALSLEPSHIG BACU010490/1-696 EIIPSGTEHP VFPKAYELEK RTSPQVLGSI LKSGTTSESG ALSLEPSHIG 601 650 ENSTTRP00000015476/1-694 DLQKADTSSQ GALVFLSKDY EIENQNPLAS PTNTLLGSAK EQRYQRGLER ENSBTAP00000044207/1-669 DLQKADTSSQ GALVFLSKDY EVENQNPLAS PTNTLLGSAK EQRYQRGLER ENSP00000225388/1-695 DLQKADTSSQ GALVFLSKDY EIESQNPLAS PTNTLLGSAK EQRYQRGLER bmy_00130T0/1-676 DLQKADTSSQ GALVFLSKDY EIENQNPLAS PTNTLLGSAK EQRYQRGLER BACU010490/1-696 DLQKADTSSQ GALVFLSKDY EIENQNPLAS PTNTLLGSAK EQRYQRGLER 651 700 ENSTTRP00000015476/1-694 NDSWGSFDLR AAIVYHTK-- -EMESVWNLQ KQDPKRIITY NEAMDSPDQ ENSBTAP00000044207/1-669 NDSWGSFDLR AAIVYHTK-- -EMESVWNLQ KQDPKRIITY NEAMDSPDQ ENSP00000225388/1-695 NDSWGSFDLR AAIVYHTK-- -EMESIWNLQ KQDPKRIITY NEAMDSPDQ bmy_00130T0/1-676 NDSWGSFDLR AAIVYHTKEQ TEMESVWNLQ KQDPKRIITY NEAMDSPDQ BACU010490/1-696 NDSWGSFDLR AAIVYHTK-- -EMESVWNLQ KQDPKRIITY NEAMDSPDQ