KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:55:31 2014 Check: 00 .. Name: ENSP00000376123/1-399 Len: 431 Check: 1275 Weight: 1.00 Name: ENSBTAP00000043972/1-418 Len: 431 Check: 429 Weight: 1.00 Name: BACU003923/1-357 Len: 431 Check: 3717 Weight: 1.00 Name: ENSTTRP00000013761/1-396 Len: 431 Check: 7932 Weight: 1.00 Name: bmy_03431T0/1-391 Len: 431 Check: 3958 Weight: 1.00 // 1 50 ENSP00000376123/1-399 MEFPLAQICP QGSHEAPIPT FSTFQITDMT RRSCQNLG-- ---------- ENSBTAP00000043972/1-418 MEFPLAQICP QGSREAPAIT FSTFQPLGLN RRSCQGPGLL LGPRLQA--P BACU003923/1-357 MEFPLAQICP QGSQEAPTIT FSTFQPLDLN RRSCQGLGLL PGPRLQALKA ENSTTRP00000013761/1-396 MEFPLAQICP QGSQEAPTIT FSTCQPIDLN -RSCQSLG-- ---------- bmy_03431T0/1-391 MEFPLAQICP QGSQEAPTIT FSTFQPIDLN RRSCQGLGLL PGPRLQALKA 51 100 ENSP00000376123/1-399 ---------- --YTAASPQA PEAASNTGNA ERAEEVPGEG SLFLQAETRA ENSBTAP00000043972/1-418 EEAWPSPRGP AGQAVAPLQV PAAACNPKDV GK-EEVPREE ALFLQAETRA BACU003923/1-357 EEARPSPRAS AAHAAAPPQA PGAACSPKDM GK-EEVPREE GMSLQAETQA ENSTTRP00000013761/1-396 ---------- --YPAAPPQA PGAACSPKDI GK-EEVPREG GMSLQAETQA bmy_03431T0/1-391 EEAQPSPRAS AAHAAAPPQA PGAACSPKDI GK-EE----- ---------- 101 150 ENSP00000376123/1-399 WFQKTQAHWL LQHGAAPAWF HGFITRRVRP PLSVTHREAE RLLEPKPQGC ENSBTAP00000043972/1-418 WFQKTQAHEL LQHGAAPIWF HGF------- ---ITRREAE RLLETKPQGC BACU003923/1-357 WFQKTQAHEL LQHGAAPAWF HGF------- ---ITRREAE RLLERKPQGC ENSTTRP00000013761/1-396 WFQNTQAHEL LQHGAAPAWF HGFITRSFR- VFSITHREAE RLLESKPQGC bmy_03431T0/1-391 ---------- -----SPSIF RVF------- --SITHREAE RLLERKPQGC 151 200 ENSP00000376123/1-399 YLVRFSESAV TFVLTYRSRT CCRHFLLAQL RDGRHVVLGE DSAHARLQDL ENSBTAP00000043972/1-418 YLVRFSESAV TFVLTYRSRT CCRHFLLAQL GDGRHVVLGE DSAHARLQDL BACU003923/1-357 YLVRFSESAV TFVLTYRSRT CCRHFLLAQL VDGRHVVLGE DSAHARLQDL ENSTTRP00000013761/1-396 YLVRFSESAV TFVLTYRSRT CCRHFLLAQL GDGRHVVLGE DSAHARLQDL bmy_03431T0/1-391 YLVRFSESAV TFVLTYRSRT CCRHFLLAQL GDGRHVVLGE DSAHARLQDL 201 250 ENSP00000376123/1-399 LLHYTAHPLS PYGETLTEPL ARQTPEPAGL SLRTEESNFG SKSQDPNPQY ENSBTAP00000043972/1-418 LLHYTACPLS PYGETLTEPL ARQTPEPAGL SLRTEESDFG SKSQDSPFQY BACU003923/1-357 LLHYKACPLS PYGETLTEPL ARQTPEPAGL SLRTEESDSG SKSQDSQTQY ENSTTRP00000013761/1-396 LRHYQACPLS PYGETLTEPL ARQTPEPAGL SLRTEESDSG SKSQVSQPQY bmy_03431T0/1-391 LRHYKACPLS PYGETLTEPL ARQTPEPAGL SLKTEQSDSG SKSQDSQPQY 251 300 ENSP00000376123/1-399 SPIIKQGQAP VPMQKEGAGE -KEPSQLLRP KPPIPAKPQL PPEVYTIPVP ENSBTAP00000043972/1-418 SPILKKERSI APTQRDGSGE PKQSSQSPRP KPPIPAKPQL QPEVYTSPAP BACU003923/1-357 TSILKKEQSA APTQKDGAGE PKQ------- ---------- ---------- ENSTTRP00000013761/1-396 TSILKKEQSA APMQKDGAGG PKQTSQPPKP KPPIPAKPQL PPEVYTSPSP bmy_03431T0/1-391 TSILKKEQSA APTQKDGAGE PKQTSQPPKP KPPIPAKPQL PPEVYTSPAP 301 350 ENSP00000376123/1-399 RHRPAPRPKP SNPIYNEPDE PIAFYAMGRG SPGEAPSNIY VEVE------ ENSBTAP00000043972/1-418 RPRPALPPKP SNPIYNEPDE PIDFYAMGRG SPGEAPSNIY AEVEVREPDS BACU003923/1-357 ---------P SNPIYHEPDE PIDFYAMGRG SPGEAPSNIY AEVEVKVPDS ENSTTRP00000013761/1-396 RPRPTPPRKP SNPIYHEPDE PIDFYAMGRG SPRERPSNIY AEVK------ bmy_03431T0/1-391 RPRPTPPPKP SNPIYHELDE PIDFYAMGRG SPGEAPSNIY AEVEVKVPDS 351 400 ENSP00000376123/1-399 -DEGLPATLG HPVLRKSWSR PVPGGQNTGG SQLHSENSVI GQGPPLPHQP ENSBTAP00000043972/1-418 RSEDPQCILR HEVLRKCQSR PVLGSQNPGG QQLHSENSVA EQGPTVPHQP BACU003923/1-357 GCEGPPCILR HEVLRKCQSR PVPGSQN--- ---------- ---------- ENSTTRP00000013761/1-396 -GEGPPC-LR HEVLQKCQSR PVPGSQNPGG QQLHSENSVA EQGPAVPHKP bmy_03431T0/1-391 GCEGPPCILR HEVLRKCQSR PVPGSQNPGG QQLHSENSVA EQGPPVPHKP 401 450 ENSP00000376123/1-399 PPAWRHTLPH NLSRQVLQDR GQAWLPLGPP Q ENSBTAP00000043972/1-418 LPRWGHTLPH NLSRQVLQDR GQAWLPLGPP Q BACU003923/1-357 LQRLESGIFV QLTLLCLASK --AFLLAGV- - ENSTTRP00000013761/1-396 LPRWGHTLPH NLSRQVLQNR GQAWLPLGPP Q bmy_03431T0/1-391 LPRWGHTLPH NLSRQVLQNR GQAWLPLGPP Q