KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:55:29 2014 Check: 00 .. Name: ENSP00000333358/1-216 Len: 348 Check: 6840 Weight: 1.00 Name: bmy_13710T0/1-344 Len: 348 Check: 8058 Weight: 1.00 Name: ENSBTAP00000043940/1-211 Len: 348 Check: 9379 Weight: 1.00 Name: BACU008588/1-213 Len: 348 Check: 6357 Weight: 1.00 Name: ENSTTRP00000007439/1-212 Len: 348 Check: 2709 Weight: 1.00 // 1 50 ENSP00000333358/1-216 ---------- ---------- ---------- ---------- ---------- bmy_13710T0/1-344 MQTNKHANDS TCSRFPAVSA LWQKMTNRGH SASHLRPVSP VVSSSDSTVS ENSBTAP00000043940/1-211 ---------- ---------- ---------- ---------- ---------- BACU008588/1-213 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007439/1-212 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000333358/1-216 ---------- ---------- ---------- ---------- ---------- bmy_13710T0/1-344 KGKQRNSSQL ESFQPKADLD SYIQSTSQLM STFPTDSPYV NQLQNCYPGH ENSBTAP00000043940/1-211 ---------- ---------- ---------- ---------- ---------- BACU008588/1-213 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007439/1-212 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000333358/1-216 ---------- ---------- --------MK LNLVQIFFML LMLLLGLGMG bmy_13710T0/1-344 LPVLQDPHIM PQQQGMWWEG QEKWEKSKMK LTLVQIFFIM LLFLLGLGVG ENSBTAP00000043940/1-211 ---------- ---------- --------MK LTLVQIFFMM LLLLLGLGVG BACU008588/1-213 ---------- ---------- --------MK LTLVQIFFIM LLLLLGLGVG ENSTTRP00000007439/1-212 ---------- ---------- --------MK LTLVQIFFIM LLLLLGLGVG 151 200 ENSP00000333358/1-216 LGLGLHMATA VLEESDQPLN EFWSSDSQDK AEATEEGDGT -QTTETLVLS bmy_13710T0/1-344 LGLGLQMAAA VLEESDXLLN EFPSSDSQDK AEATREGPGT -RSIETLLFS ENSBTAP00000043940/1-211 LGVGLQMAAA VLEESDQLLD EFLSSDSQDK AEATKEGLAS -RSTETLLVS BACU008588/1-213 LGVGLQMAAA VLEESDQLLN EFQSSDSQDK AEATRERAAT -RSIETLLFS ENSTTRP00000007439/1-212 LGLGLQMAAA VLEESDQLLN EFQSSDSHDK AEATREGVGT LRSIETL--S 201 250 ENSP00000333358/1-216 NKEVVQPGWP EDPILGEDEV GGNKMLRASA LFQSNKDYLR LDQTDRECND bmy_13710T0/1-344 NKEVVQ---L EETIVSEDEV GGNKMLRAEA LFQSNKDYLR SDLMDRECNA ENSBTAP00000043940/1-211 NKEVVQ---P EDTIISEDEV GGDRMLRAEV LLHSNKDYLR SDVMDRECNA BACU008588/1-213 NKEVVQ---L EETIISEDEV GGNKMLRAEA LFQSNKDYLR SDLMDRECNA ENSTTRP00000007439/1-212 NKEVVQ---L EETTVSEDEV GGNKMLRAEA LFQSNKDYLR SDLMDRECNA 251 300 ENSP00000333358/1-216 MMAHKMKEPS QSCIAQYAFI HEDLNTVKAV CNSPVIACEL KGGKCHKSSR bmy_13710T0/1-344 LMAQKMKPHN HTCIPQYIFI HEXLDAVKAV CKSPVVACDL KGGKCHKSSR ENSBTAP00000043940/1-211 LMALKVKSKD HTCIPQYIFI HEELDAVKAV CKSPAVACDL KGGKCHKSPR BACU008588/1-213 LMAQKMKPHN HTCIPQYIFI HEKLDAVKAV CKSPVVACDL KGGKCHKSSR ENSTTRP00000007439/1-212 LMAQKMKPHN HTCIPRYIFI HEELEAVKAV CKSPVVACDL KGGKCHKSSR 301 350 ENSP00000333358/1-216 PFDLTLCELS QPDQVTPNCN YLTSVIKKHI IITCNDM--- KRQLPTGQ bmy_13710T0/1-344 PFDLTFCKLS KPGQVTPHSN TDLLCHASAI FRDMEAIQYV KRMNFADK ENSBTAP00000043940/1-211 PFDLTFCKLS KSGQVIPHCN YVTFILEKYI LMSCSDM--- KVQITS-- BACU008588/1-213 PFDLTFCKLS KPGQVTPHCN YVTFILEKYI FISCSDM--- KVQVTSGP ENSTTRP00000007439/1-212 PFDLTICKLS KPGQVTPHCN YITFILEKYI FISCSDM--- KVQVTSGP