KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:55:15 2014 Check: 00 .. Name: ENSTTRP00000006490/1-270 Len: 345 Check: 5333 Weight: 1.00 Name: ENSBTAP00000043732/1-270 Len: 345 Check: 5927 Weight: 1.00 Name: bmy_00170T0/1-345 Len: 345 Check: 6822 Weight: 1.00 Name: ENSP00000316809/1-270 Len: 345 Check: 4839 Weight: 1.00 // 1 50 ENSTTRP00000006490/1-270 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000043732/1-270 ---------- ---------- ---------- ---------- ---------- bmy_00170T0/1-345 RRQRRGRRRG RGGRSRRGDR SESGGDRADH NEGAQAAGPG HGESGRREAG ENSP00000316809/1-270 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000006490/1-270 ---------- -----MVLLK EYRVILPVSV EEYQVGQLYS VAEASKNETG ENSBTAP00000043732/1-270 ---------- -----MVLLK EYRVILPVSV EEYQVGQLYS VAEASKNETG bmy_00170T0/1-345 GRLGGQRAAA EPRSDMVLLK EYRVILPVSV EEYQVGQLYS VAEASKNETG ENSP00000316809/1-270 ---------- -----MVLLK EYRVILPVSV DEYQVGQLYS VAEASKNETG 101 150 ENSTTRP00000006490/1-270 GGEGVEVLVN EPYEKDGEKG QYTHKIYHLQ SKVPTFVRML APEGALNIHE ENSBTAP00000043732/1-270 GGEGVEVLVN EPYEKDGEKG QYTHKIYHLQ SKVPTFVRML APEGALNIHE bmy_00170T0/1-345 GGEGVEVLVN EPYEKDGEKG QYTHKIYHLQ SKVPTFVRML APEGALNIHE ENSP00000316809/1-270 GGEGVEVLVN EPYEKDGEKG QYTHKIYHLQ SKVPTFVRML APEGALNIHE 151 200 ENSTTRP00000006490/1-270 KAWNAYPYCR T--------- -XXXXXXXXX XXXXXXXXXX XXXXXXXXXV ENSBTAP00000043732/1-270 KAWNAYPYCR T--------- -VITNEYMKE DFLIKIETWH KPDLGTLENV bmy_00170T0/1-345 KAWNAYPYCR TGALSLLVFF SPFQNEYMKE DFLIKIETWH KPDLGTQENV ENSP00000316809/1-270 KAWNAYPYCR T--------- -VITNEYMKE DFLIKIETWH KPDLGTQENV 201 250 ENSTTRP00000006490/1-270 HKLEPEAWKH VEAIYIDIAD RSQVLSKDYK AEEDPAKFKS IKTGRGPLGP ENSBTAP00000043732/1-270 HKLEPEAWKH VEVIYIDIAD RSQVLSKDYK AEEDPAKYKS IKTGRGPLGP bmy_00170T0/1-345 HKLEPEAWKH VEAVYIDIAD RSQVLSKDYK AEEDPAKFKS IKTGRGPLGP ENSP00000316809/1-270 HKLEPEAWKH VEAVYIDIAD RSQVLSKDYK AEEDPAKFKS IKTGRGPLGP 251 300 ENSTTRP00000006490/1-270 NWKQELVNQK DCPYMCAYKL VTVKFKWWGL QNKVENFIHK QEKRLFTNFH ENSBTAP00000043732/1-270 NWKQELVNQK DCPYMCAYKL VTVKFKWWGL QNKVENFIHK QERRLFTNFH bmy_00170T0/1-345 NWKQELVNQK DCPYMCAYKL VTVKFKWWGL QNKVENFIHK QERRLFTNFH ENSP00000316809/1-270 NWKQELVNQK DCPYMCAYKL VTVKFKWWGL QNKVENFIHK QERRLFTNFH 301 350 ENSTTRP00000006490/1-270 RQLFCWLDKW VDLTMDDIRR MEEETKRQLD EMRQKDPVKG MTADD ENSBTAP00000043732/1-270 RQLFCWLDKW VDLTMDDIRR MEDETKRQLD EMRQKDPVKG MTADD bmy_00170T0/1-345 RQLFCWLDKW VDLTMDDIRR MEEETKRQLD EMRQKDPVKG MTADD ENSP00000316809/1-270 RQLFCWLDKW VDLTMDDIRR MEEETKRQLD EMRQKDPVKG MTADD