KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:55:02 2014 Check: 00 .. Name: ENSTTRP00000014458/1-372 Len: 426 Check: 5115 Weight: 1.00 Name: ENSBTAP00000043669/1-361 Len: 426 Check: 5172 Weight: 1.00 Name: BACU011042/1-360 Len: 426 Check: 7937 Weight: 1.00 Name: bmy_14207T0/1-415 Len: 426 Check: 2199 Weight: 1.00 Name: ENSP00000375834/1-361 Len: 426 Check: 4472 Weight: 1.00 // 1 50 ENSTTRP00000014458/1-372 ---------- ---------- ---------- ---------- ---------M ENSBTAP00000043669/1-361 ---------- ---------- ---------- ---------- ---------M BACU011042/1-360 -----MRRLK VQYRQGAHVK LVGSTGRGPE LS-------- ---------E bmy_14207T0/1-415 AVPYFSLNLE VSQQTPHLPR LQNYRHTSRA LRCLQSFFLY LQIDKTSLKM ENSP00000375834/1-361 ---------- ---------- ---------- ---------- ---------M 51 100 ENSTTRP00000014458/1-372 SKQQPTQFIN PETPGYVGFA NLPNQVHRKS VKKGFEFTLM VVGESGLGKS ENSBTAP00000043669/1-361 SKQQQTQFIN PETPGYVGFA NLPNQVHRKS VKKGFEFTLM VVGESGLGKS BACU011042/1-360 ERQQPTQFIN PETPGYVGFA NLPNQVHRKS VKKGFEFTLM VVGESGLGKS bmy_14207T0/1-415 SKQQPTQFIN PETPGYVGFA NLPNQVHRKS VKKGFEFTLM VVGESGLGKS ENSP00000375834/1-361 SKQQPTQFIN PETPGYVGFA NLPNQVHRKS VKKGFEFTLM VVGESGLGKS 101 150 ENSTTRP00000014458/1-372 TLINSLFLTD LYPERVIPGA AALDTRRASV GRXXXXXXXX XXXXXXXXXX ENSBTAP00000043669/1-361 TLINSLFLTD LYPERVIPGA AEKIERTVQI EASTVEIEER GVKLRLTVVD BACU011042/1-360 TLINSLFLTD LYPERVIPGA AEKIERTVQI EASTVEIEER GVKLRLTVVD bmy_14207T0/1-415 TLINSLFLTD LYPERVIPGA AEKIERTVQI EASTVEIEER GVKLRLTVVD ENSP00000375834/1-361 TLINSLFLTD LYPERVIPGA AEKIERTVQI EASTVEIEER GVKLRLTVVD 151 200 ENSTTRP00000014458/1-372 XXXXXXXXXX XXXXXXXXXX XXXXFKTIIS YIDEQFERYL HDESGLNRRH ENSBTAP00000043669/1-361 TPGYGDAINC RD-------- ---CFKTIIC YIDEQFERYL HDESGLNRRH BACU011042/1-360 TPGYGDAINC RD-------- ---CFKTIIS YIDEQFERYL HDESGLNRRH bmy_14207T0/1-415 TPGYGDAINC RD-------- ---CFKTIIS YIDEQFERYL HDESGLNRRH ENSP00000375834/1-361 TPGYGDAINC RD-------- ---CFKTIIS YIDEQFERYL HDESGLNRRH 201 250 ENSTTRP00000014458/1-372 IIDNRVHCCF YFISPFGHGL KPLDVAFMKA IHNKVNIVPV IAKADTLTLK ENSBTAP00000043669/1-361 IIDNRVHCCF YFISPFGHGL KPLDVAFMKA IHNKVNIVPV IAKADSLKRM BACU011042/1-360 IIDNRVHCCF YFISPFGHGL KPLDVAFMKA IHNKVNIVPV IAKADTLTLK bmy_14207T0/1-415 IIDNRVHCCF YFISPFGHGL KPLDVAFMKA IHNKVNIVPV IAKADTLTLK ENSP00000375834/1-361 IIDNRVHCCF YFISPFGHGL KPLDVAFMKA IHNKVNIVPV IAKADTLTLK 251 300 ENSTTRP00000014458/1-372 ERERLKKRIL DEIEEHNIKI YHLPDAESDE DEDFKEQTRL LKASIPFSVV ENSBTAP00000043669/1-361 ALKRVKYHIL DEIEEHNIKI YHLPDAESDE DEDFKEQTRL LKASIPFSVV BACU011042/1-360 ERERLKKRIL DEIEEHNIKI YHLPDAESDE DEDFKEQTRL LKASIPFSVV bmy_14207T0/1-415 ERERLKKRIL DEIEEHNIKI YHLPDAESDE DEDFKEQTRL LKASIPFSVV ENSP00000375834/1-361 ERERLKKRIL DEIEEHNIKI YHLPDAESDE DEDFKEQTRL LKASIPFSVV 301 350 ENSTTRP00000014458/1-372 GSNQLIEAKG KKVRGRLYPW GVVEVENPEH NDFLKLRTML ITHMQDLQEV ENSBTAP00000043669/1-361 GSNQLIEAKG KKVRGRLYPW GVVEVENPEH NDFLKLRTML ITHMQDLQEV BACU011042/1-360 GSNQLIEAKG KKVRGRLYPW GVVEVENPEH NDFLKLRTML I--------- bmy_14207T0/1-415 GSNQLIEAKG KKVRGRLYPW GVVEVENPEH NDFLKLRTML ITHMQDLQEV ENSP00000375834/1-361 GSNQLIEAKG KKVRGRLYPW GVVEVENPEH NDFLKLRTML ITHMQDLQEV 351 400 ENSTTRP00000014458/1-372 TQDLHYENFR SERLKRGGRK VENEDMNKDQ ILLEKEAELR RMQEMIARMQ ENSBTAP00000043669/1-361 TQDLHYENFR SERLKRGGRK VENEDMNKDQ ILLEKEAELR RMQEMIARMQ BACU011042/1-360 ---------- ---------K VENEDMNKDQ ILLEKEAELR RMQEMIARMQ bmy_14207T0/1-415 TQDLHYENFR SERLKRGGRK VENEDMNKDQ ILLEKEAELR RMQEMIARMQ ENSP00000375834/1-361 TQDLHYENFR SERLKRGGRK VENEDMNKDQ ILLEKEAELR RMQEMIARMQ 401 450 ENSTTRP00000014458/1-372 AQMQMQMQGG DGDSAVHGHH V----- ENSBTAP00000043669/1-361 AQMQLQLQGG DGDSGVHGQH V----- BACU011042/1-360 AQMQLQMQGG DGDGTVHGHH V----- bmy_14207T0/1-415 AQMQLQMQGG DGDGAVHGHH VKHFAR ENSP00000375834/1-361 AQMQMQMQGG DGDGGALGHH V-----