KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:54:55 2014 Check: 00 .. Name: ENSBTAP00000043635/1-331 Len: 494 Check: 167 Weight: 1.00 Name: ENSTTRP00000010821/1-390 Len: 494 Check: 4031 Weight: 1.00 Name: bmy_01508T0/1-365 Len: 494 Check: 5203 Weight: 1.00 Name: BACU017891/1-426 Len: 494 Check: 8226 Weight: 1.00 // 1 50 ENSBTAP00000043635/1-331 MPEGPELHLA SHFVNEACRE LVFGGCVEKS PVSRNPEVPF ESSAYSISAL ENSTTRP00000010821/1-390 MPEGPELHLA SHFVNEACRE LVFGGCVEKS PVSRNPEVPF ESSAYHISAL bmy_01508T0/1-365 MPEGPELHLA SHFVNEACRE LVFGGCVEKS PVSRNPEVPF ESSAYHIAAL BACU017891/1-426 MPEGPELHLA SHFVNEACRE LVFGGCVEKS PVSRNPEVPF ESSAYHIAAL 51 100 ENSBTAP00000043635/1-331 ARGKELRLTL SPLPGAQPHR EPLALVFRFG MTGSFQLVPS DALPPHAHLR ENSTTRP00000010821/1-390 ARGKELRLTL SPLPGAQPPR GPLALVFRFG MTGSFQLVPS DALPPHAHLR bmy_01508T0/1-365 ARGKELRLTL SPLPGAQPPR GPLALVFRFG MTGSFQLVPS DALPPHAHLR BACU017891/1-426 ARGKELRLTL SPLPGAQPPR GPLALVFRFG MTGSFQLVPS DALPPHAHLR 101 150 ENSBTAP00000043635/1-331 FYTAPPGPRL ALCFVDIRRF GRWDLGGEWQ PGRGPCVLLE YEQF------ ENSTTRP00000010821/1-390 FYTAPPGPRL ALCFVDIRRF GHWDLGGKWQ PGRGPCVLLE YEQF------ bmy_01508T0/1-365 FYTAPPGPRL ALCFVDIRRF GHWDLGGKWQ PGRGPCVLLE YEQFRKLRFP BACU017891/1-426 FYTAPPGPRL ALCFVDVRRF GHWDLGGKWQ PGRGPCVLLE YEQF------ 151 200 ENSBTAP00000043635/1-331 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010821/1-390 ---------- ---------- ---------- ---------- ---------- bmy_01508T0/1-365 LPKHRGWEEG NWDSPFPSLA PRNGFPQLLS PNPLGGREGW GGQNGSHVPR BACU017891/1-426 ---------- ---------- ---------- ---------- ---------- 201 250 ENSBTAP00000043635/1-331 ----RENVLR NLADKAFDRP ICEALLDQRF FNGIGNYLRA EILYRLRIPP ENSTTRP00000010821/1-390 ----RENVLR NLADKAFDRP ICEALLDQRF FNGIGNYLRA EILYRLRIPP bmy_01508T0/1-365 LCPSRENVLR NLADKAFDRP ICEALLDQRF FNGIGNYLRA EILYRLRIPP BACU017891/1-426 ----RENVLR NLADKAFDRP ICEALLDQRF FNGIGNYLRA EILYRLRIPP 251 300 ENSBTAP00000043635/1-331 FEKARTVLEA LQQRRP---- ----SPELTL SQKIRAKLQN PDLLELCHSV ENSTTRP00000010821/1-390 FEKARTVLEA LQQRRP---- ----SPELTL SQKIRAKLQN PDLLELCHSV bmy_01508T0/1-365 FEKARTVLEA LQQRRPVLPL PLLQSPELTL SQKIRAKLQN PDLLELCHSV BACU017891/1-426 FEKARTVLEA LQQRRP---- ----SPELTL SQKIRAKLQN PDLLELCHSV 301 350 ENSBTAP00000043635/1-331 PKEVVQLGGK GYGSESGEED FAAFRAWLQC YSTPGMSSLR DRHGRTIWFQ ENSTTRP00000010821/1-390 PKEVVQLGGK GYGPESTEED FAAFRAWLRC YGTPGMSSLR DRHGRTIWFQ bmy_01508T0/1-365 PKEVVQLGGK GYGPESTEED FAAFQAWLRC YGTPGMSSLR DRQGRTIWFQ BACU017891/1-426 PKEVVQLGGK GYGPESTEED FAAFQAWLRC YGTPGMSSLR DRQGRTIWFQ 351 400 ENSBTAP00000043635/1-331 GDPGPLAPK- ---------- ---------- ---------- -----GGKSR ENSTTRP00000010821/1-390 GDPGPLAPK- ---------- ---------- ---------- -----GGKSR bmy_01508T0/1-365 GDPGPLAPK- ---------- ---------- ---------- ------GKLR BACU017891/1-426 GDPGPLAPKV PTPTLGGTPE WEHGSLEKGG RGHKTLQPHQ QLYPAGGKSR 401 450 ENSBTAP00000043635/1-331 KKKSQEAQQG PEDRVEDPPS PNKAPSRTRR AERPS----- ---------- ENSTTRP00000010821/1-390 KKKSKGAQRG SEDQVENPPS PNKAPSRTRR ARRGLPEQTA AQQPEGTSLQ bmy_01508T0/1-365 LM-------- ---------- ---------- ---------- ---------- BACU017891/1-426 KKKSKGAQRG PEDQVENPPP PNKAPSRKRR ARRGLPEQTA AQQPEGTSLQ 451 500 ENSBTAP00000043635/1-331 ---------- ---------- ---------- ---------- ---- ENSTTRP00000010821/1-390 RDPEAPCVPE KGKRRRQPAT SGRRRPQKIK ADTPSSEPEE TSVS bmy_01508T0/1-365 ---------- ---------- ---------- ---------- ---- BACU017891/1-426 WDPEAPRVPE KGKRRRQPAT SGRRRPQKIK ADTPSLEPEE TSAS