KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:52:33 2014 Check: 00 .. Name: ENSP00000246194/1-306 Len: 307 Check: 6103 Weight: 1.00 Name: ENSTTRP00000006234/1-300 Len: 307 Check: 8717 Weight: 1.00 Name: ENSBTAP00000041837/1-283 Len: 307 Check: 9717 Weight: 1.00 Name: bmy_00561T0/1-284 Len: 307 Check: 2897 Weight: 1.00 Name: BACU015551/1-300 Len: 307 Check: 8935 Weight: 1.00 // 1 50 ENSP00000246194/1-306 MSLKLQASNV TNKNDPKSIN SRVFIGNLNT ALVKKSDVET IFSKYGRVAG ENSTTRP00000006234/1-300 MSLKIQTSNV TNKNDPKSIN SRVFIGNLNT AVVKKSDVET IFSKYGRVAG ENSBTAP00000041837/1-283 MSLKIQTSNV TNKNDPKSIN SRVFIGNLNT AVVKKSDVET IFSKYGRVAG bmy_00561T0/1-284 MSLKIQTSNV TNKNDPKSIN SRVFIGNLNT AVVKKSDVET IFSKYGRVAG BACU015551/1-300 MSLKIQTSNV TNKNDPKSIN SRVFIGNLNT AVVKKSDVET IFSKYGRVAG 51 100 ENSP00000246194/1-306 CSVHKGYAFV QYSNERHARA AVLGENGRVL AGQTLDINMA GEPKPDRPKG ENSTTRP00000006234/1-300 CSVHKGYAFV QYANERHARA AVLGENGRVL AGQTLDINMA GEPKPNRPKG ENSBTAP00000041837/1-283 CSVHKGYAFV QYANERHARA AVVGENGRVL AGQTLDINMA GEPKPNRPKG bmy_00561T0/1-284 CSVHKGYAFV QYANERHARA AVLGENGRVL AGQTLDINMA GEPKPNRPKG BACU015551/1-300 CSVHKGYAFV QYANERHARA AVLGENGRVL AGQTLDINMA GEPKPNRPKG 101 150 ENSP00000246194/1-306 LKRAASAIYS GYIFDYDYYR DDFYDRLFDY RGRLSPVPVP RAVPVKRPRV ENSTTRP00000006234/1-300 LKRAASAIYS GYSFDYDYYR DDFYARLFDY RGRLSPVPVP RAVPVKRPRV ENSBTAP00000041837/1-283 LKRAASAIY- ---------- -----RLFDY RGRLSPVPVP RAVPVKRPRV bmy_00561T0/1-284 LKRAASAIY- ---------- -----RLFDY RGRLSPVPVP RAVPVKRPRV BACU015551/1-300 LKRAASAIYS GYSFDYDYYR DDFYDRLFDY RGRLSPVPVP RAVPVKRPRV 151 200 ENSP00000246194/1-306 TVPLVRRVKT NVPVKLFARS TAV-TTSSAK IKLKSSELQA IKTELTQIKS ENSTTRP00000006234/1-300 TVPLVRRVKT TIPVKLFARS TAITTTGSAK IKLKSSELRT IKTELAQIKS ENSBTAP00000041837/1-283 TVPLVRRVKT TIPVKLFARS TAI-TTGTAK IKLKSSELQT IKTELTQIKS bmy_00561T0/1-284 TVPLVRRVKT TIPVKLFARS TAITTTGSAK IKLKSSELQT IKTELTQIKS BACU015551/1-300 TVPLVRRVKT TIPVKLFARS TAITTTGSAK IKLKSSELQT IKTELTQIKS 201 250 ENSP00000246194/1-306 NIDALLSRLE QIAAEQKANP DGKKKGDGGG AGGGGGGGGS GGGGSGGGGG ENSTTRP00000006234/1-300 NIDALLGRLE QIAEAQKSNP DGKKKGESGS GSG------- SAIGSGSGSS ENSBTAP00000041837/1-283 NIDALLGRLE QIAEEQKANP DGKKKGESSS GSG------- SGGGSGSSGT bmy_00561T0/1-284 NIDALLGRLE QIAEEQKANP DGKKKGESGS GSG------- IGISSGSGSS BACU015551/1-300 NIDALLGRLE QIAEEQKANP DGKKKGESGS GSG------- IGIGSGSGSS 251 300 ENSP00000246194/1-306 GGSSRPPAPQ ENTTSEAGLP QGEARTRDDG DEEGLLTHSE EELEHSQDTD ENSTTRP00000006234/1-300 GGSSRPPAPQ EDTAAEASMP QGEAKARDDG DEEGLLTHSE EELEHSQDTD ENSBTAP00000041837/1-283 GGSSRPPAPP EDTASEAGTP QGEAQARDDG DEEGLLTHSE EELEHSQDTD bmy_00561T0/1-284 GGGSRPPAPQ EDTASEAGTP QGEAQARDDG DEEGLLTHSE EELEHSQDTD BACU015551/1-300 GGGSRPPAPQ EDTASEAGTP QGEAQARDDG DEEGLLTHSE EELEHSQDTD 301 350 ENSP00000246194/1-306 ADDGALQ ENSTTRP00000006234/1-300 ADDGALQ ENSBTAP00000041837/1-283 VEDGALQ bmy_00561T0/1-284 AEDGALQ BACU015551/1-300 AEDGALQ