KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:51:40 2014 Check: 00 .. Name: ENSP00000346196/1-473 Len: 489 Check: 4111 Weight: 1.00 Name: ENSBTAP00000041265/1-481 Len: 489 Check: 3017 Weight: 1.00 Name: ENSTTRP00000009186/1-474 Len: 489 Check: 8875 Weight: 1.00 Name: bmy_14095T0/1-477 Len: 489 Check: 2063 Weight: 1.00 Name: BACU004389/1-487 Len: 489 Check: 2493 Weight: 1.00 // 1 50 ENSP00000346196/1-473 --MAAPCLLR QGRAGALKTM LQEAQVFRGL ASTVSLSAES GKSEKGQPQN ENSBTAP00000041265/1-481 --MAASLLLR QGRAGALKTV LLEAGVFRGV APAVSLSAES GKNEKGLPPN ENSTTRP00000009186/1-474 --MAASFLLR QGLAGGLKTV LLEAGVFRGL ASTVSLSAES GKKEKGLPPN bmy_14095T0/1-477 MAMAASLLLR QGLAGGLKTV LLEAGVFRGL ASTVSLSAES GKNEKGLPPN BACU004389/1-487 MAMAASLLLR QGLAGGLKTV LLEAGVFRGL ASTVSLSAES GKNEKGLPPN 51 100 ENSP00000346196/1-473 SKKQSPPKNV VEPKERGKLL ATQTAAELSK NLSSPSSYPP AVNKGRKVAS ENSBTAP00000041265/1-481 PKKQSPPKNV VEPKERGQQL APPTADAVSK TLSAPTSSPS VVSQSRTLAS ENSTTRP00000009186/1-474 PKKQSPPKNV VEPKERGQQL ATPTADELSK NVPSPTSSPP VVKQGRVLAG bmy_14095T0/1-477 PKKQSPPKNV VEPKERGRQL ATPTADELSK NVPSPTSSPP VVNQGRVLAG BACU004389/1-487 PKKQSSPKNV VEPKERGRQL AAPAADELSK NVPSPTSSPP VVNQGRVLAG 101 150 ENSP00000346196/1-473 PSPSGSVLFT DEGVPKFLSR KTLVEFPQKV LSPFRKQGSD SEARQVGRKV ENSBTAP00000041265/1-481 PNPDASVLHT DQGLPKLLSR KTLVEFPQKV VSPFRKQGSD SEAAQWGRRG ENSTTRP00000009186/1-474 PNPDASMPLT DQGVLKFLPR KTLVEFPQKV APPFRKQGSD SEGTQQGRKG bmy_14095T0/1-477 PNPDASMPLT DQGVLKFLPR KTLVEFPQKV APPFGKQGSD SEATQQSRKG BACU004389/1-487 PNPDASMPLT DRGVLKFLPR KTLVEFPQKV APPFGKQGSD SEATQQSRKG 151 200 ENSP00000346196/1-473 T--SPSSSSS SSSSDSESDD EADVSEVTPR VVSKGRGGLR KPEASHSFEN ENSBTAP00000041265/1-481 TDDSSSSSSS SSSSDSESDE EGDRSGAGPQ VKSKRRGGSP VAEASRSSAD ENSTTRP00000009186/1-474 TDDSSSSSSS SSSSDSESDE EGDSSEAGPQ AKSKLRGGFP VAQASHSSAG bmy_14095T0/1-477 TDDSSLSSSS SSSSDSESDE EGDSSEAGPQ AKSKRRGGFP IAEASHSSAD BACU004389/1-487 TDDSSSSSSS SSSSDSESDE EGDSSEADPQ AKSKRRGGFP VAEASRSSAD 201 250 ENSP00000346196/1-473 RAPRVTVSAK EKTLLQKPHV DITDPEKPHQ PKKKGSPAKP SEGRENARPK ENSBTAP00000041265/1-481 RTSKTEISAK EKTVSQQPHL DLTPAGRPRK AEKKGASSQH LEDRKGTKPK ENSTTRP00000009186/1-474 GAPQIEISAQ EKSVSQQPHP DLVSAQRPPG A-KKGASRQP SEDRKDPKPK bmy_14095T0/1-477 GAPQTEISAQ EKSVSQQPHP DLVSAQRPHQ AKKKGASSQP SEDRKDPKPK BACU004389/1-487 GAPQTEISAQ EKSVSQQLHP DLVSAQRPHQ AKKKGASSQP SEDRKDPKPK 251 300 ENSP00000346196/1-473 TTMPRSQVDE EFLKQSLKEK QLQKTFRLNE IDKESQKPFE VKGPLPVHTK ENSBTAP00000041265/1-481 TAVPKSQATE ESMKQNVKEK QSQKIPRSNK IDKESQKPLE VKKVLSDRTP ENSTTRP00000009186/1-474 TTAPKSHAGG KFMEQDVKEK QWQEVSASNE IDKESQKPLE VKKTSSDRTK bmy_14095T0/1-477 TTAPKSHAAE KFMEQNVKEK QWQKVSTSNE IDKESQKPLE VKKTLSDRTK BACU004389/1-487 TTAPKSHAAE KFMEQNVKEK QWQQVSTSNE IGKESQKPLK VKKTLSDRTK 301 350 ENSP00000346196/1-473 SGLSAPPKGS PAPAVLAEEA RAEGQLQASP PGAAEGHLEK PVPEPQRKAA ENSBTAP00000041265/1-481 WGLSTHPAGG PAPTP-STGT RAGGQPLAPP PEARGSLLEK QVPEADGELA ENSTTRP00000009186/1-474 SGLSTRPHGS PAPTQ-SAET RA-GRRLPAT PETTERLLEK QVPEPDGEVA bmy_14095T0/1-477 SGLSTQPNGS PAPTQ-PAET RA-GRRLPAT PETEERPLEK QVPEPDGEVA BACU004389/1-487 SGLSTQPNGS PAPTQ-SAET RA-GRWLPAT PETEERLLGK QVPEPDAEVA 351 400 ENSP00000346196/1-473 PPLPRKETSG TQGIEGHLKG GQAIVEDQIP PSNLETVPVE NNHGFHEKTA ENSBTAP00000041265/1-481 LPLFKTEKLE KQAAEGILKA EEEILEDQLP MQNLKPAPVQ NKDVLDEKPA ENSTTRP00000009186/1-474 LSLFQKENLG KQVAEGILKA KEEVLEDQLP VKNLKPVPVH NKDVFDEKTA bmy_14095T0/1-477 LSLFKKENLG KQVAEGILKA KEEILEDQLP VKNLKPVPLH NKDVFDEKTA BACU004389/1-487 PSLFKKENLG KQVAEGILKA KEEILEDQLP VKNVKPVALH NKDVSDEKTA 401 450 ENSP00000346196/1-473 ALKLEAEGEA MEDAAAPGDD RGGTQ----- -------EPA PVPAEPFDNT ENSBTAP00000041265/1-481 VLKLEGTSQG KRERADPFRS SPLTP----- CCVFPAEPVS AAPTEPFDNT ENSTTRP00000009186/1-474 VLKLEEKGGI IEDSATQMEG QDGTQ----- -----ESPLA ATPAEPFDNT bmy_14095T0/1-477 VLKLEEKGRI IEDSATQMEG QDGTQ----- -----ESPLA ATLAEPFDNT BACU004389/1-487 VLKLEEKGGI IEDSATQMEG QDGTQGPHGR CVSPAESPPA ATLAEPFDNT 451 500 ENSP00000346196/1-473 TYKNLQHHDY STYTFLDLNL ELSKFRMPQP SSGRESPRH ENSBTAP00000041265/1-481 TYKNLQHHDY STYTFLDLNL DLSKFRMPQP SSGRESPRH ENSTTRP00000009186/1-474 TYKNLQHHDY STYTFLDLNL ELLKFRMPQP SSGRESPRH bmy_14095T0/1-477 TYKNLQHHDY STYTFLDLNL ELSKFRMPQP SSGRESPRH BACU004389/1-487 TYKNLQHHDY STYTFLDLNL ELTKFRMPQP SSGRESPRH