KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:51:21 2014 Check: 00 .. Name: bmy_14099T0/1-491 Len: 533 Check: 61 Weight: 1.00 Name: BACU004394/1-482 Len: 533 Check: 4676 Weight: 1.00 Name: ENSP00000344648/1-533 Len: 533 Check: 8236 Weight: 1.00 Name: ENSTTRP00000000692/1-533 Len: 533 Check: 8853 Weight: 1.00 Name: ENSBTAP00000041073/1-533 Len: 533 Check: 3686 Weight: 1.00 // 1 50 bmy_14099T0/1-491 MARLPPGIRF IVSFSRDQWY RAFIFILTFL LYASFHLSRK PISIVKGELH BACU004394/1-482 MLSNPLYPPW LVKEDVDLPV GAASIT---V LFPGF----- -----RGELH ENSP00000344648/1-533 MARLPAGIRF IISFSRDQWY RAFIFILTFL LYASFHLSRK PISIVKGELH ENSTTRP00000000692/1-533 MAPLPPGIRF IVSFSRDQWY RAFIFILTFL LYASFHLSRK PISIVKGELH ENSBTAP00000041073/1-533 MAQLPPGIRF IISFSRDQWY RAFIFILTFL LYASFHLSRK PISIVKGELH 51 100 bmy_14099T0/1-491 RDCTASYERE VRFNSQSQKA GDTPAHQLPD NGTDCGWAPF DEGNYQQLLG BACU004394/1-482 RDCTASYERE VGFHSQSRKA GDTPTHQLPD NGTDCGWAPF DEGNYQQLLG ENSP00000344648/1-533 KYCTAWDEAD VRFSSQNRKS GSAAPHQLPD NETDCGWAPF DKNNYQQLLG ENSTTRP00000000692/1-533 SYCTASYEGE VGFHSQSPKA GDTPTQQLPD NGTDCGWAPF DQDNFQQLLG ENSBTAP00000041073/1-533 SYCTASNDGK VGFSSQSQKA RDALAHQLPD NGTDCGWAPF DQDNYQQLLG 101 150 bmy_14099T0/1-491 ALDYSFLCAY AVGMYLSGII GERLPIRYYL TFGMVASGAF TALFGVGYFY BACU004394/1-482 ALDYSFLCAY AVGMYLSGII GERLPIRYYL TFGMVASGAF TALFGVGYFY ENSP00000344648/1-533 ALDYSFLCAY AVGMYLSGII GERLPIRYYL TFGMLASGAF TALFGLGYFY ENSTTRP00000000692/1-533 ALDYSFLCAY AVGMYLSGII GERLPIRYYL TFGMVASGAF TALFGVGYFY ENSBTAP00000041073/1-533 ALDYSFLCAY AIGMYLSGII GERLPIRCYL TFGMLASGAF TALFGVGYFY 151 200 bmy_14099T0/1-491 NIHSFGFYVV TQIVNGLVQT TGWPSVVTCL GNWFGKGRRG LIMGVWNSHT BACU004394/1-482 NIHSFGFYVV TQIVNGLVQT TGWPSVVTCL GNWFGKGRRG LIMGVWNSHT ENSP00000344648/1-533 NIHSFGFYVV TQVINGLVQT TGWPSVVTCL GNWFGKGRRG LIMGVWNSHT ENSTTRP00000000692/1-533 NIHSFGFYVV TQIVNGLVQT TGWPSVVTCL GNWFGKGRRG LIMGVWNSHT ENSBTAP00000041073/1-533 NIHSFGFYVI TQIINGLVQT TGWPSVVTCL GNWFGKGRRG LIMGVWNSHT 201 250 bmy_14099T0/1-491 SVGNILGSLI AGYWVSTCWG LSFIVPGAIV AAMGIVCFLF LIEHPKDIAC BACU004394/1-482 SVGNILGSLI AGYWVSTCWG LSFIVPGAIM AAMGIVCFLF LIEHPKDIAC ENSP00000344648/1-533 SVGNILGSLI AGYWVSTCWG LSFVVPGAIV AAMGIVCFLF LIEHPNDVRC ENSTTRP00000000692/1-533 SVGNILGSLI AGYWVSTCWG LSFVVPGAIV AAMGIVCFLF LIEHPKDVAC ENSBTAP00000041073/1-533 SVGNILGSLI AGYWVSTCWG LSFIVPGAIV AAMGILCFLF LIEHPKDIAC 251 300 bmy_14099T0/1-491 SSSLAMHPKG YENGTHRFRL QKQVLAEERN KPLDPEMQCL LLSDGKRSGH BACU004394/1-482 SSSLAMHPKG YENGTHRFRL QKQVLTEERN KPLDPEMQCL LLSDGKRSGH ENSP00000344648/1-533 SSTLVTHSKG YENGTNRLRL QKQILKSEKN KPLDPEMQCL LLSDGKGSIH ENSTTRP00000000692/1-533 SSSPATHPKS YENGTHRFRP QKQALTEERS KSLDPEMQCL LLSDGKRSGH ENSBTAP00000041073/1-533 SSSPASHPRG YENGAHRFWP QKPVPAEERS KPLDPEMQRL LLSDGKHSGH 301 350 bmy_14099T0/1-491 QNHVVILPAD GGGGIAAISF IGALKIPGVI EFSLCLLFAK LVSYTFLFWL BACU004394/1-482 QNHVVILPAD GGGGIAAISF VGALKIPGVI EFSLCLLFAK LVSYTFLFWL ENSP00000344648/1-533 PNHVVILPGD GGSGTAAISF TGALKIPGVI EFSLCLLFAK LVSYTFLFWL ENSTTRP00000000692/1-533 QNHVVVLPAD GGGGIAAISF VGALKIPGVI EFSLCLLFAK LVSYTFLFWL ENSBTAP00000041073/1-533 QNHVVVLPAD GGGGMAAISF TGALKIPGVI EFSLCLLFAK LVSYTFLFWL 351 400 bmy_14099T0/1-491 PLYITNVDHL DVKKAGELST LFDVGGIFGG ILAGVISDRL EKRASTCGLM BACU004394/1-482 PLYITNVDHL DVKKAGELST LFDVGGIFGG ILAGVISDRL EKRASTCGLM ENSP00000344648/1-533 PLYITNVDHL DAKKAGELST LFDVGGIFGG ILAGVISDRL EKRASTCGLM ENSTTRP00000000692/1-533 PLYITNVDHL DVKKAGELST LFDVGGIFGG ILAGVISDRL EKRASTCGLM ENSBTAP00000041073/1-533 PLYITNVDHL DVKKAGELST LFDVGGIFGG ILAGVISDRL EKRASTCGLM 401 450 bmy_14099T0/1-491 LLLAAPTLYV FSAISKMGLE ATI-----DA APQRGPG--- QRAVCTDHDR BACU004394/1-482 LLLAAPTLYM FSAISKMGLE ATIAMLLLSG ALVSGPYALI TTAVSADLGT ENSP00000344648/1-533 LLLAAPTLYI FSTVSKMGLE ATIAMLLLSG ALVSGPYTLI TTAVSADLGT ENSTTRP00000000692/1-533 LLLAAPTLYV FSAVSKMGLE ATIAMLLLSG ALVSGPYALI TTAVSADLGT ENSBTAP00000041073/1-533 LLLAAPTLYA FSSISRMGLE ATIAMLLLSG ALVSGPYALI TTAVSADLGT 451 500 bmy_14099T0/1-491 RLRRPGECGQ LSAEPGP--G AARGGHP--- ---------- FHHDAVVSVS BACU004394/1-482 HKSLKGNSHA LATVTAIIDG TGSVGT---- ---------- W------MLL ENSP00000344648/1-533 HKSLKGNAHA LSTVTAIIDG TGSVGAALGP LLAGLLSPSG WSNVFYMLMF ENSTTRP00000000692/1-533 HKSLKGNSHA LATVTAIIDG TGSVGAALGP LLAGLLSPSG WSNVFYMLVF ENSBTAP00000041073/1-533 HKSLKGNSHA LATVTAIIDG TGSVGAALGP LLAGLISPSG WNNVFYMLMF 501 550 bmy_14099T0/1-491 KTVCF----- --------CK HSFADDQ--- --- BACU004394/1-482 ARHCG----- ---------P RGDTSSHPS- --- ENSP00000344648/1-533 ADACALLFLI RLIHKELSCP GSATGDQVPF KEQ ENSTTRP00000000692/1-533 ADACALVFLL RLIHKELSCP GSATGNQALF KEH ENSBTAP00000041073/1-533 ADACALLFLV RLIHKELSCP GSATGNQVPF KEH