KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:50:15 2014 Check: 00 .. Name: BACU011045/1-339 Len: 647 Check: 7157 Weight: 1.00 Name: bmy_14211T0/1-483 Len: 647 Check: 7304 Weight: 1.00 Name: ENSTTRP00000014460/1-426 Len: 647 Check: 3054 Weight: 1.00 Name: ENSBTAP00000040234/1-426 Len: 647 Check: 4189 Weight: 1.00 // 1 50 BACU011045/1-339 ---------- ---------- ---------- ---------- ---------- bmy_14211T0/1-483 MNTGAAVRGA SSGQRGVGRG SVRAEGGGRG GGRSGGAAPP HGHPGPAPPR ENSTTRP00000014460/1-426 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000040234/1-426 ---------- ---------- ---------- ---------- ---------- 51 100 BACU011045/1-339 ---------- ---------- ---------- ---------- ---------- bmy_14211T0/1-483 GLPGDVGPSL SGSRTRSPSE LRGAPAGRDT APPRGLPGLV VQRLRAPRRR ENSTTRP00000014460/1-426 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000040234/1-426 ---------- ---------- ---------- ---------- ---------- 101 150 BACU011045/1-339 ---------- ---------- ---------- ---------- ---------- bmy_14211T0/1-483 AREGLGVPES PALGHDAARP CRRRRRRRRA FSGCRCHCRC FADWRAQASP ENSTTRP00000014460/1-426 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000040234/1-426 ---------- ---------- ---------- ---------- ---------- 151 200 BACU011045/1-339 ---------- ---------- ---------- ---------- ---------- bmy_14211T0/1-483 GERRLRVGAF VGTAERAGGG RDGAPRRASR RDLGASRRCS GWSEGRADMA ENSTTRP00000014460/1-426 ---------- ---------- ---------- ---------- --------MA ENSBTAP00000040234/1-426 ---------- ---------- ---------- ---------- --------MA 201 250 BACU011045/1-339 ----MAPEVI KQSAYDFKAD IWSLG----- ---------- -----ITAIE bmy_14211T0/1-483 HLRGFANQHS RVDPEELFTK LDRIGKGSFG EVYKGIDNRT KEVVAIKIID ENSTTRP00000014460/1-426 HLRGFANQHS RVDPEELFTK LDRIGKGSFG EVYKGIDNRT KEVVAIKIID ENSBTAP00000040234/1-426 HLRGFANQHS RVDPEELFTK LDRIGKGSFG EVYKGIDNRT KEVVAIKIID 251 300 BACU011045/1-339 LAKGEPPNSD LHPMRVLFLI PKNSPPTLEG VVVAPLL--- -------VQG bmy_14211T0/1-483 LEEAEDEIED IQ--QEITVL SQCDSPYITR YFGSYLK--- ---------- ENSTTRP00000014460/1-426 LEEAEDEIED IQ--QEITVL SQCDSPYITR YFGSYLKSTK LWIIMEYLGG ENSBTAP00000040234/1-426 LEEAEDEIED IQ--QEITVL SQCDSPYITR YFSSYLKSTK LWIIMEYLGG 301 350 BACU011045/1-339 GLRCN-PRPG ---------- LGTLRRAFPW -RGQRAAHRS LPVAPSHLEA bmy_14211T0/1-483 ------LKPG PLEETYIATI LREILKGLDY LHSERKIHRD IK-------- ENSTTRP00000014460/1-426 GSALDLLKPG PLEETYIATI LREILKGLEY LHSERKIHRD IKAANVLLSE ENSBTAP00000040234/1-426 GSALDLLKPG PLEETYIATI LREILKGLDY LHSERKIHRD IKAANVLLSE 351 400 BACU011045/1-339 PHRAPREQRG RGPGLSPGCF AFE------- ---------- ---------- bmy_14211T0/1-483 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014460/1-426 QGDVKLADFG VAGQLTDTQI KRNTFVGTPF WMAPEVIKQS AYDFKADIWS ENSBTAP00000040234/1-426 QGDVKLADFG VAGQLTDTQI KRNTFVGTPF WMAPEVIKQS AYDFKADIWS 401 450 BACU011045/1-339 ---------- ---------- ---------- -PRELAGQSL AARRLVTRVC bmy_14211T0/1-483 ---------- ---------- ---------- ------GRSF AARRLVTRVC ENSTTRP00000014460/1-426 LGITAIELAK GEPPNSDLHP MRVLFLIPKN SPPTLEGRHS KPFREFVEAC ENSBTAP00000040234/1-426 LGITAIELAK GEPPNSDLHP MRVLFLIPKN SPPTLEGHHS KPFKEFVEAC 451 500 BACU011045/1-339 ----PRQRPT AKELLKHKFI TRYTKKTSFL TELIDRYKRW KSEGHGEESS bmy_14211T0/1-483 ----PRQRPT AKELLKHKFI TRYTKKTSFL TELIDRYKRW KSEGHGEESS ENSTTRP00000014460/1-426 LNKDPRFRPA AKELLKHKFI TRYTKKTSFL TELIDRYKRW KSEGHGEESS ENSBTAP00000040234/1-426 LNKDPRFRPT AKELLKHKFI TRYTKKTSFL TELIDRYKRW RSEGHGEESS 501 550 BACU011045/1-339 SEDSDIDGDP EDGEQGPVWT FPPTIRPSPH GKLHKGTALH GPQKSAEPVK bmy_14211T0/1-483 SEDSDIDGDP EDGEQGPVWT FPPTIRPSPH GKLHKGTALH GPQK------ ENSTTRP00000014460/1-426 SEDSDIDGDP EDGEQGPVWT FPPTIRPSPH GKLHKGTALH GPQKSAEPVK ENSBTAP00000040234/1-426 SEDSDIDGDP EDGEQGPIWT FPPTIRPSPH GKLHKGTALH GPQKSAEPVK 551 600 BACU011045/1-339 RQPRSQCLST LVRPVFGELK EKHKQSGGGL GALEELENAF SLAEESCPGI bmy_14211T0/1-483 ---------- --------LK EKHKQSGGGL GALEELENAF SLAEESCPGI ENSTTRP00000014460/1-426 RQPRSQCLST LVRPVFGELK EKHKQSGGGL GALEELENAF SLAEESCPGI ENSBTAP00000040234/1-426 RQPRSQCLST LVRPVFGELK EKHKQSGGGV GALEELENAF SLAEESCPGI 601 650 BACU011045/1-339 SDKLMAQLVE RVFTQQKPPD VSPLKPLRFA HRGEGGLRLE MPCRRPR bmy_14211T0/1-483 SDKLMAQLVE RV-------- ------QRFS HS-----RNH LTSAR-- ENSTTRP00000014460/1-426 SDKLMAQLVE RV-------- ------QRFS HS-----RNH LTSAR-- ENSBTAP00000040234/1-426 SDKLMAHLVE RV-------- ------QRFS HS-----RNH LTSTR--