KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:49:49 2014 Check: 00 .. Name: ENSP00000318585/1-501 Len: 531 Check: 849 Weight: 1.00 Name: ENSBTAP00000039837/1-501 Len: 531 Check: 125 Weight: 1.00 Name: ENSTTRP00000000922/1-528 Len: 531 Check: 8577 Weight: 1.00 Name: BACU018427/1-530 Len: 531 Check: 996 Weight: 1.00 Name: bmy_03288T0/1-397 Len: 531 Check: 9202 Weight: 1.00 // 1 50 ENSP00000318585/1-501 ---------- ---------- -----MAQAL PWLLLWMGAG VLPAHGTQHG ENSBTAP00000039837/1-501 ---------- ---------- -----MAQAL PWLLLWMGSG VLPAHGSQPG ENSTTRP00000000922/1-528 EATSSTQSWG QATGTVAGWS EPRAPQGQGP PWPKRCPGSC CGWALGCCLP BACU018427/1-530 EATSSTQSWG QATGTVAGWS EPRAPQGQGP PWPKRCPGSC CGWAPGCCLP bmy_03288T0/1-397 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000318585/1-501 IRLPLRSGLG -----GAPLG LRLPRETDEE PEEPGRRGSF VEMVDNLRGK ENSBTAP00000039837/1-501 IRLPLRSGLG -----GAPLG LRLPRETDEE SEEPGRRGSF VEMVDNLRGK ENSTTRP00000000922/1-528 TAPSLASGCP CEAGWGAPLG LRLPRETD-- -EEPSRRGSF VEMVDNLRGK BACU018427/1-530 TAPSLASGCP CEAGWG-PLG LRLPRETDEE PEEPSRRGSF VEMVDNLRGK bmy_03288T0/1-397 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000318585/1-501 SGQGYYVEMT VGSPPQTLNI LVDTGSSNFA VGAAPHPFLH RYYQRQLSST ENSBTAP00000039837/1-501 SGQGYYVEMT LGSPPQTLNI LVDTGSSNFA VGAAPHPFLH RYYQRQLSST ENSTTRP00000000922/1-528 SGQGYYVEMT VGSPPQTLNI LVDTGSSNFA VGAAPHPFLH RYYQRQLSST BACU018427/1-530 SGQGYYVEMT VGSPPQTLNI LVDTGSSNFA VGAAPHPFLH RYYQRQLSST bmy_03288T0/1-397 ---------- ----MKGLNI LVDTGSSNFA VGAAPHPFLH RYYQRQLSST 151 200 ENSP00000318585/1-501 YRDLRKGVYV PYTQGKWEGE LGTDLVSIPH GPNVTVRANI AAITESDKFF ENSBTAP00000039837/1-501 YRDLRKGVYV PYTQGKWEGE LGTDLVSIPH GPNVTVRANI AAITESDKFF ENSTTRP00000000922/1-528 YRDLRKGVYV PYTQGKWEGE LGTDLVSIPH GPNVTVRANI AAITESDKFF BACU018427/1-530 YRDLRKGVYV PYTQGKWEGE LGTDLVSIPH GPNVTVRANI AAITESDKFF bmy_03288T0/1-397 YRDLRKGVYV PYTQGKWEGE LGTDLVSIPH GPNVTVRANI AAITESDKFF 201 250 ENSP00000318585/1-501 INGSNWEGIL GLAYAEIARP DDSLEPFFDS LVKQTHVPNL FSLQLCGAGF ENSBTAP00000039837/1-501 INGSNWEGIL GLAYAEIARP DDSLEPFFDS LVKQTHVPNL FSLQLCGAGF ENSTTRP00000000922/1-528 INGSNWEGIL GLAYAEIARP DDSLEPFFDS LVKQTHVPNL FSLQLCGAGF BACU018427/1-530 INGSNWEGIL GLAYAEIARP DDSLEPFFDS LVKQTHVPNL FSLQLCGAGF bmy_03288T0/1-397 INGSNWEGIL GLAYAEIARP DDSLEPFFDS LVKQTHVPNL FSLQLCGAGF 251 300 ENSP00000318585/1-501 PLNQSEVLAS VGGSMIIGGI DHSLYTGSLW YTPIRREWYY EVIIVRVEIN ENSBTAP00000039837/1-501 PLNQSEALAS VGGSMIIGGI DHSLYMGSLW YTPIRREWYY EVIIVRVEIN ENSTTRP00000000922/1-528 PLNQSEVLAS VGGSMIIGGI DHSLYMGSLW YTPIRREWYY EVIIVRVEIN BACU018427/1-530 PLNQSEVLAS VGGSMIIGGI DHSLYMGSLW YTPIRREWYY EVIIVRVEIN bmy_03288T0/1-397 PLNQSEVLAS VGGSMIIGGI DHSLYMGSLW YTPIRREWYY EVIIVRVEIN 301 350 ENSP00000318585/1-501 GQDLKMDCKE YNYDKSIVDS GTTNLRLPKK VFEAAVKSIK AASSTEKFPD ENSBTAP00000039837/1-501 GQDLKMDCKE YNYDKSIVDS GTTNLRLPKK VFEAAVKSIK AASSTEKFPD ENSTTRP00000000922/1-528 GQDLKMDCKE YNYDKSIVDS GTTNLRLPKK VFEAAVKSIK AASSTEKFPD BACU018427/1-530 GQDLKMDCKE YNYDKSIVDS GTTNLRLPKK VFEAAVKSIK AASSTEKFPD bmy_03288T0/1-397 GQDLKMDCKE YNYDKSIVDS GTTNLRLPKK VFEAAVKSIK AASSTEKFPD 351 400 ENSP00000318585/1-501 GFWLGEQLVC WQAGTTPWNI FPVISLYLMG EVTNQSFRIT ILPQQYLRPV ENSBTAP00000039837/1-501 GFWLGEQLVC WQAGTTPWNI FPVISLYLMG EVTNQSFRIT ILPQQYLRPV ENSTTRP00000000922/1-528 GFWLGEQLVC WQAGTTPWNI FPVISLYLMG EVTNQSFRIT ILPQQYLRPV BACU018427/1-530 GFWLGEQLVC WQAGTTPWNI FPVISLYLMG EVTNQSFRIT ILPQQYLRPV bmy_03288T0/1-397 GFWLGEQLVC WQAGTTPWNI FPVISLYLMG EVTNQSFRIT ILPQQYLRPV 401 450 ENSP00000318585/1-501 EDVATSQDDC YKFAISQSST GTVMGAVIME GFYVVFDRAR KRIGFAVSAC ENSBTAP00000039837/1-501 EDVATSQDDC YKFAISQSST GTVMGAVIME GFYVVFDRAR KRIGFAVSAC ENSTTRP00000000922/1-528 EDVATSQDDC YKFAISQSST GTVMGAVIME GFYVVFDRAR KRIGFAVSAC BACU018427/1-530 EDVATSQDDC YKFAISQSST GTVMGAVIME GFYVVFDRAR KRIGFAVSAC bmy_03288T0/1-397 EDVATSQDDC YKFAISQSST GTVMGAVIME GFYVVFDRAR KRIGFAVSAC 451 500 ENSP00000318585/1-501 HVHDEFRTAA VEGPFVTLDM EDCGYNIPQT DESTLMTIAY VMAAICALFM ENSBTAP00000039837/1-501 HVHDEFRTAA VEGPFVTPDM EDCGYNIPQT DESTLMTIAY VMAAICALFM ENSTTRP00000000922/1-528 HVHDEFRTAA VEGPFVTLDM EDCGYNIPQT DESTLMTIAY VMAAICALFM BACU018427/1-530 HVHDEFRTAA VEGPFVTLDM EDCGYNIPQT DESTLMTIAY VMAAICALFM bmy_03288T0/1-397 H--------- ---------- -DCGYNIPQT DESTLMTIAY VMAAICALFM 501 550 ENSP00000318585/1-501 LPLCLMVCQW CCLRCLRQQH DDFADDISLL K ENSBTAP00000039837/1-501 LPLCLMVCQW RCLRCLRHQH DDFADDISLL K ENSTTRP00000000922/1-528 LPLCLMVCQW RCLRCLRHQH DDFADDISLL K BACU018427/1-530 LPLCLMVCQW RCLRCLRHQH DDFADDISLL K bmy_03288T0/1-397 LPLCLMVCQW RCLRCLRHQH DDFADDISLL K