KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:47:51 2014 Check: 00 .. Name: ENSP00000245564/1-570 Len: 572 Check: 128 Weight: 1.00 Name: BACU020069/1-174 Len: 572 Check: 9497 Weight: 1.00 Name: ENSTTRP00000012650/1-175 Len: 572 Check: 9939 Weight: 1.00 Name: bmy_03393T0/1-571 Len: 572 Check: 4427 Weight: 1.00 Name: ENSBTAP00000037709/1-572 Len: 572 Check: 2071 Weight: 1.00 // 1 50 ENSP00000245564/1-570 MAGGAREVLT LQLGHFAGFV GAHWWNQQDA ALGRATDSKE PPGELCPDVL BACU020069/1-174 ---------- ---------- -------MDP TVCM------ ---------- ENSTTRP00000012650/1-175 ---------- ---------- -------MDP TVCM------ ---------- bmy_03393T0/1-571 MAGGAREVLT LQLGHFAGFV GAHWWNQQDA ALCRPTDAKE PPGELCPDVL ENSBTAP00000037709/1-572 MAGGAREVLT LQLGHFAGFV GAHWWNQQDA ALCRPTDAKE PPGELCPDVL 51 100 ENSP00000245564/1-570 YRTGRTLHGQ ETYTPRLILM DLKGSLSSLK EEGGLYRDKQ LDAAIAWQGK BACU020069/1-174 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012650/1-175 ---------- ---------- ---------- ---------- ---------- bmy_03393T0/1-571 YRTGRTLHGQ ETYTPRLILM DLKGSLSSLK QEGGLYRDKQ LDAAIAWQGK ENSBTAP00000037709/1-572 YRTGRTLHGQ ETYTPRLILM DLKGSLSSLK QEGGLYRDKQ LDAAIAWQGK 101 150 ENSP00000245564/1-570 LTTHKEELYP KNPYLQDFLS AEGVLSSDGV WRVKSIPNGK GSSPLPTATT BACU020069/1-174 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012650/1-175 ---------- ---------- ---------- ---------- ---------- bmy_03393T0/1-571 LTTHKEELYP KNPYLQDLLS AEGVLSSDGI WRVKSIPNGK GPPPFTTATT ENSBTAP00000037709/1-572 LTTHKEELYP KNPYLQDLLS AEGVLSSDGT WRVKSIPNGK GLPPFTNAIT 151 200 ENSP00000245564/1-570 PKPLIPTEAS IRVWSDFLRV HLHPRSICMI QKYNHDGEAG RLEAFGQGES BACU020069/1-174 ---------- ---WGPF--- ---------- ---------- ---------- ENSTTRP00000012650/1-175 ---------- ---WGPF--- ---------- ---------- ---------- bmy_03393T0/1-571 PKPVIPTEGS IRVWSDFLRV PLHPRSICMI QKYNHDGETG RLEAFGQGES ENSBTAP00000037709/1-572 PKPVMPTEGS IRVWSDFLRV HLHPRSICMI HKYNHDGEAG RLEAFGQGES 201 250 ENSP00000245564/1-570 VLKEPKYQEE LEDRLHFYVE ECDYLQGFQI LCDLHDGFSG VGAKAAELLQ BACU020069/1-174 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012650/1-175 ---------- ---------- ---------- ---------- ---------- bmy_03393T0/1-571 ILKEPKYLEE LEDRLHFYVE ECDYLQGFQI LCDLHNGFSG VGAKAAELLQ ENSBTAP00000037709/1-572 ILKEPKYLEE LEDRLHFYVE ECDYLQGFQI LCDLHDGFSG LGAKAAELLQ 251 300 ENSP00000245564/1-570 DEYSGRGIIT WGLLPGPYHR GEAQRNIYRL LNTAFGLVHL TAHSSLVCPL BACU020069/1-174 ---------- WNM------- ---------- ---------- -----LLCPV ENSTTRP00000012650/1-175 ---------- WNV------- ---------- ---------- -----LLCPV bmy_03393T0/1-571 DEYSGRGIIT WGLLPGPYRL GEPQKNIYRL LNTAFGLVHL SAHSSLVCPL ENSBTAP00000037709/1-572 DEYSGRGIIT WGLLPGPYRL GELQKNIYRL LNTAFGLVHL SAHSSLVCPL 301 350 ENSP00000245564/1-570 SLGGSLGLRP EPPVSFPYLH YDATLPFHCS AILATALDTV TVPYRLCSSP BACU020069/1-174 ---------- ---------- --------CG A--------- ---------- ENSTTRP00000012650/1-175 ---------- ---------- --------RG A--------- ---------- bmy_03393T0/1-571 SLGGSLGLQP EPPVNFPHLQ YDAALPFHCG AILATALDTV TVPYRLCSSP ENSBTAP00000037709/1-572 SLGGSLGLRP EPPVSFPLLQ YDATLPFHCG AILATALDTV TVPYRLRSSP 351 400 ENSP00000245564/1-570 VSMVHLADML SFCGKKVVTA GAIIPFPLAP GQSLPDSLMQ FGGATPWTPL BACU020069/1-174 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012650/1-175 ---------- ---------- ---------- ---------- ---------- bmy_03393T0/1-571 ISMVHLADML NFSGKKVVTA GATIPFPLVP SQSLPDTLMQ LGEATPWTPL ENSBTAP00000037709/1-572 VSMVHLADML NFSGKKVVTA GATIPFPSVP SQSLPDTLMQ LGEATPWTPL 401 450 ENSP00000245564/1-570 SACGEPSGTR CFAQSVVLRG IDRACHTSQL TPGTPPPSAL HACTTGEEIL BACU020069/1-174 ---------- --------EG -DTACHTSQL TPGTPLPSLL HACTTGEEVL ENSTTRP00000012650/1-175 ---------- --------EG LDRACHTSQL TPGTPLPSPL HACTTGEEVL bmy_03393T0/1-571 SACGNPSGTC CFAQSVVLRG LDRECHTSQL TPGTPLPSLL HACTTGEEVL ENSBTAP00000037709/1-572 SACGDPSGTC CFAQSVVLRG LDRAHHTSQL APGTPLPSPL HACATGEEVL 451 500 ENSP00000245564/1-570 AQYLQQQQPG VMSSSHLLLT PCRVAPPYPH LFSSC-SPPG MVLDGSPKGA BACU020069/1-174 AQYLQQQQPR VRSSSHLLLT PCKVVPPYPY LFSSSLSQQG LVLDGPPTGA ENSTTRP00000012650/1-175 AQYLQQQQPR VRSSSHLLLT PCKVVPPYPY LFSSSFSQQG LVLDGPPTGA bmy_03393T0/1-571 AQYLQQQQPR VRSSSHLLLT PCKVVPPYPY LFSSSLSQQG LVLDGPPTGA ENSBTAP00000037709/1-572 AQYLQQQQPR VRSSSHLLLT PCKVVPPYPS LFSSSLSQHG SVLDGLPTGT 501 550 ENSP00000245564/1-570 AVESIPVFGA LCSSSSLHQT LEALARDLTK LDLRRWASFM DAGVEHDDVA BACU020069/1-174 AVESIPVLGA LCSSSSLNRT LGDLAKDLAR LDLRRWASFM DAGVEQDDLE ENSTTRP00000012650/1-175 AVESIPVLGA LCSSSSLNRA LGDLAKDLAR LDLRRWASFM DAGVEQDDLE bmy_03393T0/1-571 AVESIPVLGA LCSSSSLNRT LGDLAKDLAR LDLRRWASFM DAGVEQDDLE ENSBTAP00000037709/1-572 AVESIPVLGA LCSSSSLNRA LGDLAKDLSK LDLRRWASFM DAGVEQDDLE 551 600 ENSP00000245564/1-570 ELLQELQSLA QCYQGGDS-L VD BACU020069/1-174 ETLQELRSLA QCYQSGNS-L LD ENSTTRP00000012650/1-175 ETLQELRSLA QCYQSGDS-L MD bmy_03393T0/1-571 EMLQELRSLA QCYQSGDS-L MD ENSBTAP00000037709/1-572 ETLQDLRSLA QCYEGGDDRL VD