KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:46:36 2014 Check: 00 .. Name: bmy_13721T0/1-264 Len: 697 Check: 3716 Weight: 1.00 Name: ENSP00000258821/1-440 Len: 697 Check: 7709 Weight: 1.00 Name: BACU008582/1-696 Len: 697 Check: 8435 Weight: 1.00 Name: ENSBTAP00000036097/1-440 Len: 697 Check: 7962 Weight: 1.00 Name: ENSTTRP00000006693/1-440 Len: 697 Check: 7402 Weight: 1.00 // 1 50 bmy_13721T0/1-264 ---------- ---------- ---------- ---------- ---------- ENSP00000258821/1-440 ---------- ---------- ---------- ---------- ---------- BACU008582/1-696 MSLCEDMLLC NYRKCRIKLS GYAWVTACSH IFCDQHGSGE FSRSPAICPA ENSBTAP00000036097/1-440 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006693/1-440 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_13721T0/1-264 ---------- ---------- ---------- ---------- ---------- ENSP00000258821/1-440 ---------- ---------- ---------- ---------- ---------- BACU008582/1-696 CNSTLSGKLD IVRTELSPSE EYKAMVLAGL RPEIVLDISS RALAFWTYQV ENSBTAP00000036097/1-440 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006693/1-440 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_13721T0/1-264 ---------- ---------- ---------- -------MMA EEEEEVKEIL ENSP00000258821/1-440 ---------- ---------- ---------- -------MMA DEEEEVKPIL BACU008582/1-696 HQERLYQEYN FSKAEGHLKQ LEKIYMQQIQ SKDIELTSMK GEVTSMKKVL ENSBTAP00000036097/1-440 ---------- ---------- ---------- -------MMA VEEEEVKEVL ENSTTRP00000006693/1-440 ---------- ---------- ---------- -------MMA EEEEEVKEIL 151 200 bmy_13721T0/1-264 SK-------- ---------- ---------- ---------- ---------- ENSP00000258821/1-440 QK-------- ---------- ---------- ---------- ---------- BACU008582/1-696 EEYKKKFSDI SEKLMERNRQ YQKLQGLYDS LRLRNITIAN QDGTLEPSMI ENSBTAP00000036097/1-440 QK-------- ---------- ---------- ---------- ---------- ENSTTRP00000006693/1-440 PK-------- ---------- ---------- ---------- ---------- 201 250 bmy_13721T0/1-264 ---------- ---------- ---------- ---------- ---------- ENSP00000258821/1-440 ---------- ---------- ---------- ---------- ---------- BACU008582/1-696 AQSGVFGFPL GNNSKFPLDS TPVRNRGGGD GDFQFRPFFV GSPTAPEPTN ENSBTAP00000036097/1-440 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006693/1-440 ---------- ---------- ---------- ---------- ---------- 251 300 bmy_13721T0/1-264 ---------- ---------- -LQELVDQLY SFRECYFETH SVEDAGRKQQ ENSP00000258821/1-440 ---------- ---------- -LQELVDQLY SFRDCYFETH SVEDAGRKQQ BACU008582/1-696 SFFNFASPSN ELEQQQVSSR AFKELVDQLY SFRECYFETH SVEDAGRKQQ ENSBTAP00000036097/1-440 ---------- ---------- -LQELVDQLY SFRECYFETH SVDDAGRKQQ ENSTTRP00000006693/1-440 ---------- ---------- -LQELVDRLY SFRECYFETH SVEDAGRKQQ 301 350 bmy_13721T0/1-264 DVRXEMEKTL QQMEEVVGSV QGKAQVLMLT GKALNVTPDY SPKAEELLSK ENSP00000258821/1-440 DVQKEMEKTL QQMEEVVGSV QGKAQVLMLT GKALNVTPDY SPKAEELLSK BACU008582/1-696 DVREEMEKTL QQMEEVVGSV QGKAQVLMLT GKALNVTPDY SPKAEELLSK ENSBTAP00000036097/1-440 DVREEMEKTL QQMEEVVGSV QGNAQVLMLT GKALNVTPDY SPKAEELLSK ENSTTRP00000006693/1-440 DVQEEMEKTL QQMEEVVGSV QSKAQVLMLT GKALNVTPNY SPKAEELLSK 351 400 bmy_13721T0/1-264 AVKLEPKLVE AWNQLGEVYW KKGDVAAAHT CFSGALTHCK NKVSLQNLSM ENSP00000258821/1-440 AVKLEPELVE AWNQLGEVYW KKGDVAAAHT CFSGALTHCR NKVSLQNLSM BACU008582/1-696 AVKLEPKLVE AWNQLGEVYW KKGDVAAAHT CFSGALTHCK NKVSLQNLSM ENSBTAP00000036097/1-440 AVKLEPKLVE AWNQLGEVYW KKGDVAAAHT CFSGALTHCK NKVSLQNLSM ENSTTRP00000006693/1-440 AVKLEPKLVE AWNQLGEVYW KKGDVAAAHT CFSGALTHCK NKVSLQNLSM 401 450 bmy_13721T0/1-264 VLRQLRTDSG DEHSRHVMDS VRQAKLAVQM DILDGRSWYI LGNAYLSLYF ENSP00000258821/1-440 VLRQLRTDTE DEHSHHVMDS VRQAKLAVQM DVHDGRSWYI LGNSYLSLYF BACU008582/1-696 VLRQLRTDSG DEHSRHVMDS VRQAKLAVQM DILDGRSWYI LGNAYLSLYF ENSBTAP00000036097/1-440 VLRQLRTDSG DEHSRHVMDS VRQAKLAVQM DILDGRSWYI LGNAYLSLYF ENSTTRP00000006693/1-440 VLRQLRTDSG DEHSRHVMDS VRQAKLAVQM DILDGRSWYI LGNAYLSLYF 451 500 bmy_13721T0/1-264 STGQNPKISQ QALSAYAQAV SI-------- ---------- -----YGHP- ENSP00000258821/1-440 STGQNPKISQ QALSAYAQAE KVDRKASSNP DLHLNRATLH KYEESYGEAL BACU008582/1-696 STGQNPKISQ QALSAYAQAE KVDRTASSNP DLHLNRATLH KYEENYGEAL ENSBTAP00000036097/1-440 NTGQNPKISQ QALSAYAQAE KVDRTASSNP DLHLNRATLH KYEENYGEAL ENSTTRP00000006693/1-440 NTGQNPKISQ QALSAYAQAE KVDRTASSNP DLHLNRATLH KYEENYGEAL 501 550 bmy_13721T0/1-264 ---------- ---------- ---------- -------GKI ---------- ENSP00000258821/1-440 EGFSRAAALD PAWPEPRQRE QQLLEFLDRL TSLLESKGKV KTKKLQSMLG BACU008582/1-696 EGFSRAAALD PAWPEPQQRE QQLLDFLNRL TSLLESKGKV KTRKLQSMLG ENSBTAP00000036097/1-440 EGFSRAAALD PAWPEPWQRE QQLLDFLTRL TSFLESKGKV KTKKLQSMLG ENSTTRP00000006693/1-440 EGFSRAAALD PAWPEPQQRE QQLLDFLNRL TSLLESKGKV KTRKLQSMLG 551 600 bmy_13721T0/1-264 ---------- ----YRGSNR NK-------- ---------- ---------- ENSP00000258821/1-440 SLRPAHLGPC SDGHYQSASG QKVTLELKPL STLQPGVNSG AVILGKVVFS BACU008582/1-696 SLRPAHLGPC GDGRYQSASG QKVTLERKPL SALQPGVNSG AVVLGKVVFS ENSBTAP00000036097/1-440 NLRPAHLGPC GDGRYQSASG QKVTLERKPL NALQPGVNSG AVVLGKVVFS ENSTTRP00000006693/1-440 SLRPAHLGPC GDGHYQSASG QKVTLERKPL SALQPGVNSG AVVLGKVVFS 601 650 bmy_13721T0/1-264 ---------- ---------- ------SVVQ SSWGL----- ---------- ENSP00000258821/1-440 LTTEEKVPFT FGLVDSDGPC YAVMVYNIVQ S-WGVLIGDS VAIPEPNLRL BACU008582/1-696 LTTEEKVPFT FGLVDSDGPC CAVMVYNMVQ S-WGVLIGDS VAIPEPNLRL ENSBTAP00000036097/1-440 LTTEEKVPFT FGLVDSDGPC YAVMVYNMVQ S-WGVLIGDS VAIPEPNLRL ENSTTRP00000006693/1-440 LTTEEKVPFT FGLVDSDGPC CAVMVYNMVQ S-WGVLIGDS VAIPEPNLRL 651 700 bmy_13721T0/1-264 ---------- -FSKMHGQCL L--------- ASSVRSFAKL GVQR--- ENSP00000258821/1-440 HRIQHKGKDY SFSSVRVETP LLLVVNGKPQ GSSSQAVATV ASRPQCE BACU008582/1-696 HRIQHKGKDY SFSSVRVETP LLLVVNGKPQ GSSSQAAATV ASRPQCE ENSBTAP00000036097/1-440 HRIQHKGKDY SFSSVRVETP LLLVVNGKPQ GSSSQAAATV ASRPQCE ENSTTRP00000006693/1-440 HRIQHKGKDY SFSSVRVETP LLLVVNGKPQ GSSSQAAATV ASRPQCE