KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:46:05 2014 Check: 00 .. Name: ENSP00000389600/1-796 Len: 849 Check: 5047 Weight: 1.00 Name: ENSBTAP00000035880/1-793 Len: 849 Check: 6344 Weight: 1.00 Name: ENSTTRP00000003797/1-797 Len: 849 Check: 2425 Weight: 1.00 Name: bmy_07385T0/1-849 Len: 849 Check: 5225 Weight: 1.00 Name: BACU007645/1-797 Len: 849 Check: 9976 Weight: 1.00 // 1 50 ENSP00000389600/1-796 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000035880/1-793 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003797/1-797 ---------- ---------- ---------- ---------- ---------- bmy_07385T0/1-849 MSARTRILSS TYFSVRLEVT FSSSEKEILN LDSYQDVLKN SNNPLGDSHF BACU007645/1-797 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000389600/1-796 --MTKDKEPI VKSFHFVCLM IIIVGTRIQF SDGNEFAVDK SKRGLIHVPK ENSBTAP00000035880/1-793 --MIKDKESP IRSCHFVYIV ALVFGTIIQF SDESEFVVDM SKTSLIHVPK ENSTTRP00000003797/1-797 --MTKGKESA VRNLHFVYIL TLVFGTIIHF SDESEFVVDM SKIGLIRVRK bmy_07385T0/1-849 NIMTKDKESA VRNLHFVYIL TLVFGTIIQF SDESEFVVDM SKIGLIRVPK BACU007645/1-797 --MTKDKESA VRNLHFVYIL TLVFGTIIQF SDESEFVVDM SKIGLIRVPK 101 150 ENSP00000389600/1-796 DLPLKTKVLD MSQNYIAELQ VSDMSFLSEL TVLRLSHNRI QLLDLSVFKF ENSBTAP00000035880/1-793 DLPPKTKVLD LSQNNISELH LSDISFLSGL RVLRLSHNRI QGLDISIFKF ENSTTRP00000003797/1-797 DLPPKTKVLD MSQNYISELH LSDIGFLSGL KVLRLSHNRI QYLDISIFKF bmy_07385T0/1-849 DLSPKTEVLD MSQNYISELH LSDIGFLSGL KVLRLSHNRI QCLDISIFKF BACU007645/1-797 DLSPKTEVLD MSQNYVSELH LSDIGFLSGL KVLRLSHNRI QCLDISIFKF 151 200 ENSP00000389600/1-796 NQDLEYLDLS HNQLQKISCH PI-VSFRHLD LSFNDFKALP ICKEFGNLSQ ENSBTAP00000035880/1-793 NHDLEYLDLS HNQLQKISCH PITTTLKHLD LSFNDFDALP ICKEFGNLTQ ENSTTRP00000003797/1-797 NQDLEYLDLS HNWLQKISCH PITTSLKHLD LSFNDFDALP ICKEFGNLTQ bmy_07385T0/1-849 NQDLEYLDLS HNRLQKISCH PITTSLKHLD LSFNDFDALP ICKEFGSLTQ BACU007645/1-797 NQDLEYLDLS HNRLQKISCH PITTSLKHLD LSFNDFDTLP ICKEFGSLTQ 201 250 ENSP00000389600/1-796 LNFLGLSAMK LQKLDLLPIA HLHLSYILLD LRNYYIKENE TESLQILNAK ENSBTAP00000035880/1-793 LNFLGLSATK LQQLDLLPIA HLHLSCILLD LEDY-MKENK KESLQILNTK ENSTTRP00000003797/1-797 LNFLGLSATK LQQLDLLPIA HLHLSRILLD LEGYFVKENE KESLQILNTK bmy_07385T0/1-849 LNFLGLSATK LQQLDLLPIA HLHLSCILLD LEGYFVKENE NESLQILNTK BACU007645/1-797 LNFLGLSATK LQQLDLLPIA HLHLSCILLD LEGYFVKENE KESLQILNTK 251 300 ENSP00000389600/1-796 TLHLVFHPTS LFAIQVNISV NTLGCLQLTN IKLNDDNCQV FIKFLSELTR ENSBTAP00000035880/1-793 KLHLVFHPNS FFSVQVDISA NSLGCLQLTN IKLNDYNCQV LLKFLSGLTG ENSTTRP00000003797/1-797 ELHLVFHPNS FFSVQVNISV NSLGWLQLTN IKLNDDNCQV LIKFLSELTR bmy_07385T0/1-849 ELHLVFHPNS FFSVQVNISV NSLGWLQLTN IKLNDDNCQV LIKFLSELTR BACU007645/1-797 ELHLVFHPNS FFSVQVNISV NSLGWLQLTN IKLNDDNCQV LIKFLSELTR 301 350 ENSP00000389600/1-796 GSTLLNFTLN HIETTWKCLV RVFQFLWPKP VEYLNIYNLT IIESIREEDF ENSBTAP00000035880/1-793 GPTLLNFTLN HMETTWKCLV KVFQFLWPKP IEYLNIYNLT IVESIDEEVF ENSTTRP00000003797/1-797 GPTLLNFTLN HMETTWKCLV GVFQFLWPKP VEYLNIYNLT IVESINEEVF bmy_07385T0/1-849 XPTLLNFTLN HMETTWKCLV GVFQFLWPKP VEYLNIYNLT LVESINEEVF BACU007645/1-797 GPTLLNFTLN HMETTWKCLV GVFQFLWPKP VEYLNIYNLT IVESINEEVF 351 400 ENSP00000389600/1-796 TYSKTTLKAL TIEHITNQVF LFSQTALYTV FSEMNIMMLT ISDTPFIHML ENSBTAP00000035880/1-793 TYYKTTLKAL KIEHITNKVF IFSQTALYTV FSEMNILMLT ISDTRFIHML ENSTTRP00000003797/1-797 TYHETTLKAL NIEHIINXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_07385T0/1-849 TYHETTLKAL TIEHVINRVF IFSQTALYTV FSEMTITMLT ISDTPFVHML BACU007645/1-797 TYHETTLKAL NIEHVINRVF IFSQTALYTV FSEMTITMLT ISDTPFVHML 401 450 ENSP00000389600/1-796 CPHAPSTFKF LNFTQNVFTD SIFEKCSTLV KLETLILQKN GLKDLFKVGL ENSBTAP00000035880/1-793 CPQEPSTFKF LNFTQNSFTD SVFQNCDTLA RLETLILQKN ELKDLFKTSL ENSTTRP00000003797/1-797 XXXXXXXXXF LNFTQNIFTD SVFQNCHTLV RLETLILQKN ELKDLFKVGL bmy_07385T0/1-849 CPQKPSTFTF LNFTQNIFTD SVFQNCHTLA RLETLXLQKN ELKDLFXVGL BACU007645/1-797 CPQKPSTFTF LNFTQNIFTD SVFQNCHTLT RLETLILQKN ELKDLFKVGL 451 500 ENSP00000389600/1-796 MTKDMPSLEI LDVSWNSLES GRHKENCTWV ESIVVLNLSS NMLTDSVFRC ENSBTAP00000035880/1-793 MTKDMLSLET LDVSWNSLEY DRSNGNCSWV GSIVVLNLSS NALTDSVFRC ENSTTRP00000003797/1-797 MTKDMLSLEI LDVSWNSLEY DRHDGNCTWV GSIVVLNLSS NILTDSVFRC bmy_07385T0/1-849 MTKDMLSLEI LDVSWNSLEY DRHDGNCTWV GSIVVLNLSS NILTDSVFRC BACU007645/1-797 MTKDMLSLEI LDVSWNSLEY DRHDGNCTWV GSIVVLNLSS NILTDSVFRC 501 550 ENSP00000389600/1-796 LPPRIKVLDL HSNKIKSVPK QVVKLEALQE LNVAFNSLTD LPGCGSFSSL ENSBTAP00000035880/1-793 LPPRIKVLDL HNNRIRSIPK DVTGLETLQE LNLASNSLAH LPGCGIFSSL ENSTTRP00000003797/1-797 LPPRVKVLDL HNNRIRSIPK DVTSLETLQE LNVASNSLAH LPGCGTFSSL bmy_07385T0/1-849 LPPRVKVLDL HNNRIRSIPI DVTSLETLQE LNVASNSLAH LPGCGTFSSL BACU007645/1-797 LPPRVKVLDL HNNRIRSIPK DVTSLETLQE LNVASNSLAH LPGCGTFSSL 551 600 ENSP00000389600/1-796 SVLIIDHNSV SHPSADFFQS CQKMRSIKAG DNPFQCTCEL REFVKNIDQV ENSBTAP00000035880/1-793 SILIIDYNSI SNPSADFFQS CQKIRSLKVG NNPFQCSCEL RDFIQSVGQV ENSTTRP00000003797/1-797 SVLIIDYNSV SNPSADFFQS CQKIRSLKAG NNPFQCTCEL RDFIRSVGQV bmy_07385T0/1-849 SILIIDYNSV SNPSADFFQS CQKIRSLKAG NNPFQCTCEL RDFIQSVGQI BACU007645/1-797 SILIIDYNSI SNPSADFFQS CQKIRSLKAG NNPFQCTCEL RDFIQSVGQV 601 650 ENSP00000389600/1-796 SSEVLEGWPD SYKCDYPESY RGSPLKDFHM SELSCNITLL IVTIGATMLV ENSBTAP00000035880/1-793 SSDVVEGWPE SYKCDYPESY KGTPLKDFQV SELSCNTALL IVTIVVPGLV ENSTTRP00000003797/1-797 SGEVVEGWPD SYKCDYPESY KGTPLKDFHV SPLSCNTALL IVTIGVPGLV bmy_07385T0/1-849 SSEVVEGWPD SYKCDYPESY KGTPLKDFHV SQLSCNTALL IVTIGVPGLV BACU007645/1-797 SSEVVEGWPD SYKCDYPESY KGTPLKDFHV SQLSCNTALL IVTIGVPGLV 651 700 ENSP00000389600/1-796 LAVTVTSLCI YLDLPWYLRM VCQWTQTRRR ARNIPLEELQ RNLQFHAFIS ENSBTAP00000035880/1-793 LAVAVTVLCI YLDLPWYLRM VCQWTQTRRR ARNVPLEELQ RTLQFHAFIS ENSTTRP00000003797/1-797 LAVTVTALCI YLDLPWYLRM VCQWTQTRRR ARNVPLEELQ RTVQFHAFIS bmy_07385T0/1-849 LAVTVTVLCI YLDLPWYLRM VXQWTQTRXR ARNVPLEELQ RXXQFHAFIS BACU007645/1-797 LAVTVTVLCI YLDLPWYLRM VCQWTQTRHR ARNVPLEELQ RALQFHAFIS 701 750 ENSP00000389600/1-796 YSEHDSAWVK SELVPYLEKE DIQICLHERN FVPGKSIVEN IINCIEKSYK ENSBTAP00000035880/1-793 YSEHDSAWVK NELIPNLEKE DIRICLHERN FVAGKSIVEN IINCIEKSYK ENSTTRP00000003797/1-797 YSEHDSAWVK NELIPNLEKE DIRICLHERN FVPGKSIVEN IINCIEKSYK bmy_07385T0/1-849 YSXHDSAWVK NEXXPXLEKE DIRICLHERN FVPGKSIXEN IINCIEKSYK BACU007645/1-797 YSEHDSAWVK NELVPCLEKE DIRICLHERN FVPGKSIVEN IINCIEKSYK 751 800 ENSP00000389600/1-796 SIFVLSPNFV QSEWCHYELY FAHHNLFHEG SNNLILILLE PIPQNSIPNK ENSBTAP00000035880/1-793 SIFVLSPNFV QSEWCHYELY FAHHNLFHEG SDNLILILLD PIPQYSIPSS ENSTTRP00000003797/1-797 CIFVLSPNFV QSEWCHYELY FAHHNLFHEG SNNLILILLD PIPQDSIPGK bmy_07385T0/1-849 SIFVLSPNFV QSEWCHYELY FAHHNLFHEG SNNLILILLE PIPQNSIPGK BACU007645/1-797 SIFVLSPNFV QSEWCHYELY FAHHNLFHEG SNNLILILLD PIPQNSIPGK 801 850 ENSP00000389600/1-796 YHKLKALMTQ RTYLQWPKEK SKRGLFWANI RAAFNMKLTL VTENNDVKS ENSBTAP00000035880/1-793 YHKLRALMAQ RTYLEWPKEK SKHGLFWANL RASINIK--L MEKAAEIH- ENSTTRP00000003797/1-797 YHKLRALMAQ RTYLEWPKEK SKHGLFWANI RAAFNIKLIL VPENDDVKA bmy_07385T0/1-849 YHKLRALMAQ RTYLEWPKEK SKHGLFWANI RAAFNIKLTL VTENDDVKA BACU007645/1-797 YHKLRALMAQ RTYLEWPKEK SKHGLFWANI RAAFNIKLTL VTENDDVKA