KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:46:04 2014 Check: 00 .. Name: ENSP00000361522/1-557 Len: 674 Check: 458 Weight: 1.00 Name: ENSBTAP00000035843/1-548 Len: 674 Check: 2910 Weight: 1.00 Name: bmy_00049T0/1-378 Len: 674 Check: 988 Weight: 1.00 Name: ENSTTRP00000005998/1-544 Len: 674 Check: 4261 Weight: 1.00 Name: BACU015804/1-663 Len: 674 Check: 4889 Weight: 1.00 // 1 50 ENSP00000361522/1-557 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000035843/1-548 ---------- ---------- ---------- ---------- ---------- bmy_00049T0/1-378 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005998/1-544 ---------- ---------- ---------- ---------- ---------- BACU015804/1-663 MAELPRFYWV RVKLGLPNRP QSRPEERAPE LGCSQTKLSV CMECLEGVCH 51 100 ENSP00000361522/1-557 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000035843/1-548 ---------- ---------- ---------- ---------- ---------- bmy_00049T0/1-378 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005998/1-544 ---------- ---------- ---------- ---------- ---------- BACU015804/1-663 ESVANRANQE SWLVGEKTLT LSYWLEEVAG LWDAESRGLT PGQRNRESCR 101 150 ENSP00000361522/1-557 ---------- -----MTSAA PAKKPYRKAP PEHRELRLEI PGSRLEQEEP ENSBTAP00000035843/1-548 ---------- -----MTSAA PAKKPYRKAP PEHRELRLES PGSRPEQEEP bmy_00049T0/1-378 ---------- ------MSLF PSLAP----- ---------- ---------- ENSTTRP00000005998/1-544 ---------- -----MTSAA PAKKPYRKAP PEHRELRLEV PGSQLEQ-EP BACU015804/1-663 QADGMFLVEE PSPPRMTSAA PAKKPYRKAP PEHRELRLEG PGSQLEQEEP 151 200 ENSP00000361522/1-557 LTDAERMKLL QEENEELRRR LASATRRTEA LERELEIGQD CLELELGQSR ENSBTAP00000035843/1-548 LTDAERMKLL QQENEELRRR LASATRRTEA LERELEIGQD CLELELGQSR bmy_00049T0/1-378 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005998/1-544 LTDTERMKLL QQENEELRRR LASATRRTEA LERELEIGQD CLELELGQ-- BACU015804/1-663 LTDAERMKLL QQENEELRRR LASATRRTEA LERELEIGQD CLELELGQSR 201 250 ENSP00000361522/1-557 EELDKFKDKF RRLQNSYTAS QRTNQELEDK LHTLASLSHS WIFAIKKAEM ENSBTAP00000035843/1-548 EELDKFKDKF RRLQNSYTAS QRTNQELEDK LHTL------ ----IKKAEM bmy_00049T0/1-378 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005998/1-544 ---------- --LQHSYTAS QRTNQELEDK LHTLASLSHS WIFAIKKAEM BACU015804/1-663 EELDKFKDKF RRLQHSYTAS QRTNQELEDK LHTL------ ----IKKAEL 251 300 ENSP00000361522/1-557 DRKTLDWEIV ELTNKLLDAK NTINKLEELN ERYRLDCNLA VQLLKCNKSH ENSBTAP00000035843/1-548 DRKTLDWEIV ELTNKLLDAR NTINKLEELN ERYRLDCNLA VQLLKCNKSH bmy_00049T0/1-378 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005998/1-544 DRKTLDWEIV ELTNKLLDAR NTINKLEELN ERYRLDCNLA VQLLKCNKSH BACU015804/1-663 DRKTLDWEIV ELTNKLLDAR NTINKLEELN ERYRLDCNLA VQLLKCNKSH 301 350 ENSP00000361522/1-557 FRNHKFADLP CELQDMVRKH LHSGQEAASP GPAPSLAPGA VVPTSVIARV ENSBTAP00000035843/1-548 FRNHKFADLP CELQDMVRKH LHSGQEAASP GPAPSLAPGA VVPTSVIARV bmy_00049T0/1-378 -----LPQLP CELQDMVRKH LHSGQEATSP GPASSLAPGA VVPTSVIARV ENSTTRP00000005998/1-544 FRNHKFADLP CELQDMVRKH LHTGQEATSP GPAPSLAPGA VVPTSVIARV BACU015804/1-663 FRNHKFADLP CELQDMVRKH LHSGQEATSP GPASSLAPGA VVPTSVIARV 351 400 ENSP00000361522/1-557 LEKPESLLLN SAQSGSAGRP LAEDVFVHVD MSEGVPGDPA SPPAPGSPTP ENSBTAP00000035843/1-548 LEKPESLLLN SAQSGSTGHP LAEDVFVHVD MSGGDPGDSA SPPAPSSPSP bmy_00049T0/1-378 LEKPESLLLN SAQSGSAGHP LAEDVFVHVD MSGSDPGDPA SPPAPGSPVP ENSTTRP00000005998/1-544 LEKPESLLLN SAQSGSAGHP LAEDVFVHVD MSGSDPGDPA SCPAPGSPVP BACU015804/1-663 LEKPESLLLN SAQSGSAGHP LAEDVFVHVD MSGSDPGDPA SPPAPGSPVP 401 450 ENSP00000361522/1-557 QPNGECHSLG TARGSPEEEL PLPAFEKLNP YPTPSPPHPL YPGRRVIEFS ENSBTAP00000035843/1-548 QPNGECHSLG TAGGSPEEEL PLPAFEKLSP YPTPSPPHPL YPGRRVIEFS bmy_00049T0/1-378 QPNGECCSLG TAGSSPEEEM SLPAFEKLSP YPTPSPPHPL YPGRKVIEFS ENSTTRP00000005998/1-544 QPNGECCSLG TVGGSPEEEM SLPAFEKLSP YPTPSPPHPL YPGRKVIEFS BACU015804/1-663 QPNGECCSLG TAGGSPEEEM SLPAFEKLSP YPTPSPPHPL YPGRKVIEFS 451 500 ENSP00000361522/1-557 EDKVRIPRNS PLPNCTYATR QAISLSLVEE GSERARPSPV PSTPASAQAS ENSBTAP00000035843/1-548 EDKVRIPRNS PLPNCTYATR QAISLSLVEE GSERARPSPV PSSPASAQAS bmy_00049T0/1-378 EDKVRIPRNS PLPNCTYATR QAISLSLVEE GSERARPSPV PSSPASAQAS ENSTTRP00000005998/1-544 EDKVRIPRNS PLPNCTYATR QAISLSLVEE GSERARPSPV PSSPASAQAS BACU015804/1-663 EDKVRIPRNS PLPNCTYATR QAISLSLVEE GSERARPSPV PSSPASAQAS 501 550 ENSP00000361522/1-557 PHHQPSPAPL TLSAPASSAS SEEDLLVSWQ RAFVDRTPPP AAVAQRTAFG ENSBTAP00000035843/1-548 PQHQPRPAPP ALSAPASSAS SEEDLLASWQ RVFVDRAPPP AAVAQRTAFG bmy_00049T0/1-378 PQHQPSPAPS GLSAPASSAS SEEDLLASWQ RAFVDRTPPP ATVAQRTAFG ENSTTRP00000005998/1-544 PQHQPSPAPP GLSAPASSAS SEEDLLASWQ RAFVDRTPPP AAVTQRTAFG BACU015804/1-663 PQHQPSPAPS GLSAPASSAS SEEDLLASWQ RAFVDRTPPP AAVAQRTAFG 551 600 ENSP00000361522/1-557 RDALPELQRH FAHSPADRDE VVQAPSARPE ESELLLPTEP DSGFPREEEE ENSBTAP00000035843/1-548 RDALPELQRH FALGPAGGD- EVQAPSSPPG ESGLLLLPEA DPGFPREEDE bmy_00049T0/1-378 RDALPELQRH FALGPAGGDE EVQAPSSPPG ESGLLLPTEA DPGFPREEEE ENSTTRP00000005998/1-544 RDALPELQRH FAFGPAGGDE EVQAPSSPPG ESGLLLPTEA DPGFPREEEE BACU015804/1-663 RDTLPELQRH FAFGPAGGD- EVQASSSPPG ESGLLLPTEA DPGFPREEEE 601 650 ENSP00000361522/1-557 --LNLPISPE EERQSLLPIN RGTEEGPGTS HTEGRAWPLP SSSRPQRSPK ENSBTAP00000035843/1-548 EELNLPVSPE EERQSLLPSD AGTEEGPSAP RAEGRVWALP SPSRPQRSPK bmy_00049T0/1-378 EQLNLPISPE EERQSLLPSD GGTEEGPGTP RTEGRAWALP SSGRPQRSPK ENSTTRP00000005998/1-544 EQLNLPISPE EERQSLLPSD GGTEEGPGTP RTEGRAWALP SSSRPQRSPK BACU015804/1-663 EQLNLPISPE EERQSLLPSD GGTEEGPGTP RTEGRAWALP SSSRPQRSPK 651 700 ENSP00000361522/1-557 RMGVHHLHRK DSLTQAQEQG NLLN ENSBTAP00000035843/1-548 RMGVHHLHRK DSLTQAQEQG TLLH bmy_00049T0/1-378 RMGVHHLHRK DSLTQAQEQG NLLN ENSTTRP00000005998/1-544 RMGVHHLHRK DSLTQAQEQG NLLN BACU015804/1-663 RMGVHHLHRK DSLTQAQEQG NLLN