KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:46:03 2014 Check: 00 .. Name: ENSTTRP00000006551/1-482 Len: 501 Check: 2004 Weight: 1.00 Name: ENSP00000275015/1-500 Len: 501 Check: 5024 Weight: 1.00 Name: ENSBTAP00000035832/1-455 Len: 501 Check: 4817 Weight: 1.00 Name: bmy_00029T0/1-437 Len: 501 Check: 9646 Weight: 1.00 Name: BACU015820/1-362 Len: 501 Check: 4814 Weight: 1.00 // 1 50 ENSTTRP00000006551/1-482 -VNRTRESGP GN-PLGANAE GGKGD-SRAG PRSGSACRGR G--------- ENSP00000275015/1-500 MNQRRSESRP GNHRLQAYAE PGKGDSGGAG PLSGSARRGR GGGGAIRVRR ENSBTAP00000035832/1-455 ---------- ---------- ------GGAS VRKRGACRGR G--------- bmy_00029T0/1-437 ---RIRLGYP AA-------- ---------- --RSSGCRGP R--------- BACU015820/1-362 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000006551/1-482 ----LRAGRA SASDGATQLH GVADARTPPA FQA-STLLAD PSGPRSPGM- ENSP00000275015/1-500 PCWSGGAGRG GGPAWAVRLP TVTAGWTWPA LRTLSSLRAG PSEPHSPGRR ENSBTAP00000035832/1-455 ----LRAGRA SASHWAAQLP RVAAAADPAA ARF-SPSPSG P--PRSPGRR bmy_00029T0/1-437 ---------- ---------- ----QRSEPL YAS-----RR PLGPPKPGKE BACU015820/1-362 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000006551/1-482 PLRAQHPLCX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000275015/1-500 PPRAGRPLCQ ADPQPGKAAR RSLEPDPAQT GPRPARAAGM SEARKGPDEA ENSBTAP00000035832/1-455 PFRVPHPLCE ADLQPGKAAR ---SRILLGP GP-AAGAAGM SEARKGPDET bmy_00029T0/1-437 ATPGPAPALQ GGPATRKGGA ---ESDPART GPRRAGAAGM SEARKGPDET BACU015820/1-362 ---------- ---------- ---------- ---------M SEARKGPDET 151 200 ENSTTRP00000006551/1-482 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX X-XXXXXXXX XXXXXXXXXX ENSP00000275015/1-500 EESQYDSGIE SLRSLRSLPE STSAPASGPS D-GSPQPCTH PPGPVKEPQE ENSBTAP00000035832/1-455 DESQYDSGIE SLRSLRSLPE STPRPASGPS DGGGPQPWIH SPGTAKEPEE bmy_00029T0/1-437 DESQYDSGIE SLRSLRSLPE PTPAPASGPS DGGGPQPWTH PPGIAKEPEE BACU015820/1-362 DESQYDSGIE SLRSLRSLPE PTPAPASGPS DGGGPQPWTH PPGTAKEPEE 201 250 ENSTTRP00000006551/1-482 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000275015/1-500 KEDADGERAD STYGSSSLTY TLSLLGGPEA EDPAPRLPLP HVGALSPQQL ENSBTAP00000035832/1-455 KEDTDGERAD STYGSSSLTE PLSLSGDPRT EDAVPDSPLP VAGALSPQQL bmy_00029T0/1-437 KEDTDGERAD STYGSSSLTE PLSLLGDPKT EDPAPDSPLP AAGALSPQQL BACU015820/1-362 KEDTDGERAD STYGSSSLTE PLSLLGDPKT EDPAPDSPLP AAGALSPQQL 251 300 ENSTTRP00000006551/1-482 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXTALH ENSP00000275015/1-500 EALTYISEDG DTLVHLAVIH EAPAVLLCCL ALLPQEVLDI QNNLYQTALH ENSBTAP00000035832/1-455 EALTYISEDG DTLIHLAVIH EAPAVLLYCL ALLPQEVLDI QNNLYQTALH bmy_00029T0/1-437 EALTYISEDG DTLIHLAVIH EAPAVLLYCL ALLPQEVLDI QNNLYQTALH BACU015820/1-362 EALTYISEDG DTLIHLAVIH EAPAVLLYCL ALLPQEVLDI QNNLYQTALH 301 350 ENSTTRP00000006551/1-482 LAVHLDQPGA VRALVLKGAS RVLQDRHGDT ALHVACQRQH LACARCLLEG ENSP00000275015/1-500 LAVHLDQPGA VRALVLKGAS RALQDRHGDT ALHVACQRQH LACARCLLEG ENSBTAP00000035832/1-455 LAVHLDQPGA VRALVLKGAS RVLQDRHGDT ALHVACQRQH LACARCLLEG bmy_00029T0/1-437 LAVHLDQPGA VRALVLKGAS RVLQDRHGDT ALHVACQRQH LACARCLLEG BACU015820/1-362 LAVHLDQPGA VRALVLKGAS RVLQDRHGDT ALHVACQRQH LACARCLLEG 351 400 ENSTTRP00000006551/1-482 QPELGRGPPH SLDLQLQNWQ GLACLHIATL QRNWPLMELL LQNGADINAQ ENSP00000275015/1-500 RPEPGRGTSH SLDLQLQNWQ GLACLHIATL QKNQPLMELL LRNGADIDVQ ENSBTAP00000035832/1-455 QPEPGRGPPH SLDLQLQNWQ GLACLHIATL QRNRPLMELL LQNGADIDVQ bmy_00029T0/1-437 QPEPGRGPPH SLDLQLQNWQ GLACLHVATL QRNWPLMELL LQNGADINAQ BACU015820/1-362 QPEPGRGPPH SLDLQLQNWQ GLACLHIATL QRNWPLMELL LQNGADINAQ 401 450 ENSTTRP00000006551/1-482 EGTSGKTALH LAVETHERGL VQFLLQAGAR VDARMLNGCT PLHLAAGRGL ENSP00000275015/1-500 EGTSGKTALH LAVETQERGL VQFLLQAGAQ VDARMLNGCT PLHLAAGRGL ENSBTAP00000035832/1-455 EGTSGKTALH LAVETQERGL VQFLLQAGAR VDARMLNGCT PLHLAAGRGL bmy_00029T0/1-437 EGTSGKTALH LAVETHERGL VQFLLQAGAR VDARMLNGCT PLHLAAGRGL BACU015820/1-362 EGTSGKTALH LAVETHERGL VQFLLQAGAR VDARMLNGCT PLHLAAGRGL 451 500 ENSTTRP00000006551/1-482 RSISSTLCEA GADSLLRNVE DETPQDLAED PFALLPFDDL KISGKPLLCA ENSP00000275015/1-500 MGISSTLCKA GADSLLRNVE DETPQDLTEE SLVLLPFDDL KISGKLLLCT ENSBTAP00000035832/1-455 SGISSTLCEA GADSLLRNVE DETPQDLAED PFALLPFDDL KISGKPLLCA bmy_00029T0/1-437 SSISSTLCEA GADSLLRNVE DETPQDLAED PFALLPFDDL KISGKPLLCA BACU015820/1-362 SSISSTLCEA GADSLLRNVE DETPQDLAED PFALLPFDDL KISGKPLLCA 501 550 ENSTTRP00000006551/1-482 D ENSP00000275015/1-500 D ENSBTAP00000035832/1-455 D bmy_00029T0/1-437 D BACU015820/1-362 D