KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:45:04 2014 Check: 00 .. Name: ENSP00000297130/1-251 Len: 251 Check: 6011 Weight: 1.00 Name: ENSBTAP00000035055/1-245 Len: 251 Check: 9689 Weight: 1.00 Name: ENSTTRP00000012118/1-245 Len: 251 Check: 8378 Weight: 1.00 Name: bmy_14420T0/1-246 Len: 251 Check: 77 Weight: 1.00 Name: BACU013107/1-246 Len: 251 Check: 1120 Weight: 1.00 // 1 50 ENSP00000297130/1-251 MIPKEQKGPV MAAMGDLTEP VPTLDLGKKL SVPQDLMMEE LSLRNNRGSL ENSBTAP00000035055/1-245 MIPKEQKGPV MTTTGDLTEP VPLLDLGKKL SVPQDLMMEE LSLRNNRGSL ENSTTRP00000012118/1-245 MIPKEQKGPV MTTMGDLTEP VPLLDLGKKL SVPQDLMMEE LSLRNNRGSL bmy_14420T0/1-246 MIPKEQKGPV MTTMGDLTEP VPLLDLGKKL KVPQDLMLEE LSLRNNRGSL BACU013107/1-246 MIPKEQKGPV MTTMGDLTEP VPLLDLGKKM KVPQDLMLEE LSLRNNRGSL 51 100 ENSP00000297130/1-251 LFQKRQRRVQ KFTFELAASQ RAMLAGSARR KVTGTAESGT VANANGPEGP ENSBTAP00000035055/1-245 LFQKRQRRVQ KFTFEFAASP RAVVAGSAKE KVTGTAEPGM VANSH--EGK ENSTTRP00000012118/1-245 LFQKRQRRVQ KFTFEFAASP RALVAGSAKE KVTGTAEPGM VANSS--EGQ bmy_14420T0/1-246 LFHKRQRRVQ KFTFEFASSP RALVAGSAKE KVTGTAEPGM VANSS--EGQ BACU013107/1-246 LFHKRQRRVQ KFTFEFASSP RALVAGSAKE KVTGTAEPGT VANSS--KGQ 101 150 ENSP00000297130/1-251 NYRSELHIFP ASPGASLGGP EGAHPAAAPA GCVPSPSALA PGYAEPLKGV ENSBTAP00000035055/1-245 NYRSELHIYP AS---H-GGP GDAESMASRL VSTYNPSALA PGYAEPLKGI ENSTTRP00000012118/1-245 NYRSELHIFP TS---A-GGP EDAQPTAARP VSAHSPSALA PGYAEPLKGV bmy_14420T0/1-246 NYHSELHIFP TS---GPGAP EDAQPTAXRX VSAHSPSALA PGYAEPLKGV BACU013107/1-246 NYHSELHIFP TS---GPGGP EGAQPTAARP VSARSPSALA PGYAEPLKGV 151 200 ENSP00000297130/1-251 PPEKFNHTAI SKGYRCPWQE FVSYRDYQSD GRSHTPSPND YRNFNKTPVP ENSBTAP00000035055/1-245 PPEKFNHTAI PKGYRCPWQE FISYRDYLGE GGSHTPSLVE YRNFNKTPMP ENSTTRP00000012118/1-245 PPEKFNHTAI PKGYSCPWQE FLSYQDHLGE GRSHTPSLAE YRNFNKTPVP bmy_14420T0/1-246 PPEKFNHTAI PKGYSCPWKE FVSYRDDLGE GGSHTHSLLE YRNFNKTPVP BACU013107/1-246 PPEKFNHTAI PKGYSCPWKE FVSYREDLGE GGSHTHSLLE YRNFNTTPVP 201 250 ENSP00000297130/1-251 FGGPLVGGTF PRPGTPFIPE PLSGLELLRL RPSFNRVAQG WVRNLPESEE ENSBTAP00000035055/1-245 FGGPLVGETL PRAGTPFVPE LTSGLELLRL RPSFNRVAQG WVRNLPESEE ENSTTRP00000012118/1-245 FGGALVGETI PRAGTPFVPE LTSGLELLRL RPSFNRVAQG WVRNLPESEE bmy_14420T0/1-246 FGGRLVGETI PRAGTLFVPE LTSGLELLRL RPSFNRVAQG WVCNLPESEE BACU013107/1-246 FGGRLVGETI SRAGTLFVPE LTSGLELLRL RPSFNRVAQG WVCNLPESEE 251 300 ENSP00000297130/1-251 L ENSBTAP00000035055/1-245 L ENSTTRP00000012118/1-245 L bmy_14420T0/1-246 L BACU013107/1-246 L