KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:44:49 2014 Check: 00 .. Name: ENSP00000308901/1-306 Len: 306 Check: 1745 Weight: 1.00 Name: ENSBTAP00000034751/1-306 Len: 306 Check: 5549 Weight: 1.00 Name: bmy_14043T0/1-171 Len: 306 Check: 1538 Weight: 1.00 Name: BACU006987/1-306 Len: 306 Check: 4242 Weight: 1.00 Name: ENSTTRP00000006063/1-306 Len: 306 Check: 4600 Weight: 1.00 // 1 50 ENSP00000308901/1-306 MAAPIPQGFS CLSRFLGWWF RQPVLVTQSA AIVPVRTKKR FTPPIYQPKF ENSBTAP00000034751/1-306 MAAPLPRSLS CLSRAVGWWS RQPILMTQST AVVPVRTKKR FTPPIYQPKY bmy_14043T0/1-171 ---------- ---------- ---------- ---------- ---------- BACU006987/1-306 MAVPVPRGLS RLSRALGWWS RQPVLVTQST AVFTVRTKKR FTPPTYQPKY ENSTTRP00000006063/1-306 MAVPVPRDLS RLSRALGWWS RQPVLVTQST AVFPVRTKKR FTPPTYQPKY 51 100 ENSP00000308901/1-306 KTEKEFMQHA RKAGLVIPPE KSDRSIHLAC TAGIFDAYVP PEGDARISSL ENSBTAP00000034751/1-306 KTEKEFTEYA RKAGLVIPQE SLERPIHLAC TASIFDAYVP PEGDARVSSL bmy_14043T0/1-171 ---------- ---------- ---------- ---------- ---------- BACU006987/1-306 KSEKEFVEYA RKAGLVIPPE HLERPIHLAC TAGIFDAYVP PEGDARVSSL ENSTTRP00000006063/1-306 KSEKEFVEYA RKAGLVIPPE RLERPIHLAC TAGIFDAYVP PEGDARVSSL 101 150 ENSP00000308901/1-306 SKEGLIERTE RMKKTMASQV SIRRIKDYDA NFKIKDFPEK AKDIFIEAHL ENSBTAP00000034751/1-306 SKEGLAQRTE RLKKNVASQL SIRRIKESDP NFKVKDFPEK AQDIFIEAHL bmy_14043T0/1-171 ---------- ---------- -IRRIRESDP NFKIKDFPEK AQDIFTEAHL BACU006987/1-306 SKEGLAQRTE RLKKNVTSQL SIRRIRESDP NFKIKDFPEK AQDIFIEAHL ENSTTRP00000006063/1-306 SKEGLAQRTE RLKKNVASQL SIRRIRESDP NFKIKDFPEK AQDIFIEAHL 151 200 ENSP00000308901/1-306 CLNNSDHDRL HTLVTEHCFP DMTWDIKYKT VRWSFVESLE PSHVVQVRCS ENSBTAP00000034751/1-306 CLNNSDHDRL HTLVTENCFP DMVWDIKYKT VRWSFVESLE PPQVVQVRCS bmy_14043T0/1-171 CLNNSDHDRL HTLVTENCFP DMVWDIKYKT VRWNFVESLE PPQVVQVRCS BACU006987/1-306 CLNNSDHDRL HTLVTENCFP DMVWDIKYKT VRWNFVESLE PPQVVQVRCS ENSTTRP00000006063/1-306 CLNNSDHDRL HTLVTENCFP DMVWDIKYKT VRWNFVESLE PPQVVQVRCS 201 250 ENSP00000308901/1-306 SMMNQGNVYG QITVRMHTRQ TLAIYDRFGR LMYGQEDVPK DVLEYVVFEK ENSBTAP00000034751/1-306 SLVTKSNAYG QVTVRMHTRQ TLAIYDRFGR LMYGQEDVPR DVLEYVVFEK bmy_14043T0/1-171 SLLKQGNAYG QVTIRMHTRQ TLAIYDRFGR LMYGQEDVPR DVLEYVVFEK BACU006987/1-306 SLLKQGNAYG QVTIRMHTRQ TLAIYDRFGR LMYGQEDVPR DVLEYVVFEK ENSTTRP00000006063/1-306 SLLNQGNAYG QVTIRMHTRQ TLAIYDRFGR LMYGQEDVPR DVLEYVVFEK 251 300 ENSP00000308901/1-306 QLTNPYGSWR MHTKIVPPWA PPKQPILKTV MIPGPQLKPE EEYEEAQGEA ENSBTAP00000034751/1-306 HLANPYGSWR MHGKIVPPWA PPKQPILKTV MIPGPQLKPG EEYEELQREA bmy_14043T0/1-171 HLVNPYGSWR MHGKIIPPWA PPKQPILKL- ------LSPD EKQYVSENI- BACU006987/1-306 HLVNPYGSWR MHGKIIPPWA PPKQPILKTV MIPGPQMKPW EEYEEPQGEA ENSTTRP00000006063/1-306 HLVNPYGSWR MHGKIIPPWA PPKQPILKTV MIPGPQMKPW EEYEEPQGET 301 350 ENSP00000308901/1-306 QKPQLA ENSBTAP00000034751/1-306 HKPQLA bmy_14043T0/1-171 ------ BACU006987/1-306 HKPQLA ENSTTRP00000006063/1-306 HNPQLA