KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:44:08 2014 Check: 00 .. Name: BACU000743/1-163 Len: 473 Check: 9801 Weight: 1.00 Name: ENSTTRP00000013015/1-449 Len: 473 Check: 8605 Weight: 1.00 Name: ENSP00000297261/1-462 Len: 473 Check: 8461 Weight: 1.00 Name: bmy_12671T0/1-234 Len: 473 Check: 512 Weight: 1.00 Name: ENSBTAP00000034059/1-466 Len: 473 Check: 4771 Weight: 1.00 // 1 50 BACU000743/1-163 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013015/1-449 ---MLLLARC LLVVLVSSLL MCSGLACGPG PGFGKRR-PK KLT--LYKQ- ENSP00000297261/1-462 ---MLLLARC LLLVLVSSLL VCSGLACGPG RGFGKRRHPK KLTPLAYKQF bmy_12671T0/1-234 MDEMLLLARC LLVVLVSSLL MCSGLACGPG RGFGKRRNPK KLTPLAYKQF ENSBTAP00000034059/1-466 --EMLLLARC LLVLLVSSLL MCSGLACGPG RGFGKRRNPK KLTPLAYKQF 51 100 BACU000743/1-163 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013015/1-449 IP-VAERL-- ASGRYEGKIT RNSERFKELT PNYN-DIIFK DEENTGADRL ENSP00000297261/1-462 IPNVAEKTLG ASGRYEGKIS RNSERFKELT PNYNPDIIFK DEENTGADRL bmy_12671T0/1-234 IPNVAEKTLG ASGRYEGKIT RNSERFKELT PNYNPDIIFK DEENTGADRL ENSBTAP00000034059/1-466 IPNVAEKTLG ASGRYEGKIT RNSERFKELT PNYNPDIIFK DEENTGADRL 101 150 BACU000743/1-163 ---------- ------MNQW PGVKLRVTEG WDEDGHHSEE SLHYEGRAVD ENSTTRP00000013015/1-449 MTQRCKDKLN ALAISVMNQW PGVKLRVTEG WDEDGHHSEE SLHYEGRAVD ENSP00000297261/1-462 MTQRCKDKLN ALAISVMNQW PGVKLRVTEG WDEDGHHSEE SLHYEGRAVD bmy_12671T0/1-234 MTQRCKDKLN ALAISVMNQW PGVKLRVTEG WDEDGHHSEE SLHYEGRAVD ENSBTAP00000034059/1-466 MTQRCKDKLN ALAISVMNQW PGVKLRVTEG WDEDGHHSEE SLHYEGRAVD 151 200 BACU000743/1-163 ITTSDRDRSK YGMLARLAVE AGFDWVYYES KAHIHCSVKA GMDSVRPVPV ENSTTRP00000013015/1-449 ITTSDRDRSK YGMLARLAVE AGFDWVYYES KAHIHCSVKA E-NSVAAKSG ENSP00000297261/1-462 ITTSDRDRSK YGMLARLAVE AGFDWVYYES KAHIHCSVKA E-NSVAAKSG bmy_12671T0/1-234 ITTSDRDRSK YGMLARLAVE AGFDWVYYES KAHIHCSVKA G-EGAGPRAH ENSBTAP00000034059/1-466 ITTSDRDRSK YGMLARLAVE AGFDWVYYES KAHIHCSVKA A-HAGRARGG 201 250 BACU000743/1-163 PSW------- ---------- ELSLPLRPQR PTFSEPRC-- ---------- ENSTTRP00000013015/1-449 GC--FPGSAT VHLE--QGGT KLVKDLRPGD RVLAADDEGR LLYSDFLTFL ENSP00000297261/1-462 GC--FPGSAT VHLE--QGGT KLVKDLSPGD RVLAADDQGR LLYSDFLTFL bmy_12671T0/1-234 PCRQHP---- ---------- PAAPDLR--- ---------- ---------- ENSBTAP00000034059/1-466 ACQERPGCAN SACEARASGG PACESLRGGG RGVAPEQTGR GAAARRNTFL 251 300 BACU000743/1-163 -RGHLASRAF SQPCFRSPRC RWQ------- ---------- -------RQE ENSTTRP00000013015/1-449 DRDHGAKKVF YAIETREPRE RLLLTAAHLL FVAPHNGSAG REPE---ALS ENSP00000297261/1-462 DRDDGAKKVF YVIETREPRE RLLLTAAHLL FVAPHNDSAT GEPE---ASS bmy_12671T0/1-234 ---------- -------PKA WL-------- ---------- ---------- ENSBTAP00000034059/1-466 DRDRGAKKVF YAIETREPRE RLLLTAAHLL FVAPHNGSAA GAPEGAAAAA 301 350 BACU000743/1-163 GKMVGRGDCP GERLQPSLPS RP-------- ---------- ---------- ENSTTRP00000013015/1-449 GAGRPPGGAP ERRALFASSV RPGQHVYVVA ERGGDRRLLP AAVHSVTLRE ENSP00000297261/1-462 GSGPPSGGAL GPRALFASRV RPGQRVYVVA ERDGDRRLLP AAVHSVTLSE bmy_12671T0/1-234 ---------T GKRKV----- ---------- ---------- ---------- ENSBTAP00000034059/1-466 AAAAAGGGAP GRRALFASRV RPGQHVYVVA ERGGARRLLP AAVHSVTLRE 351 400 BACU000743/1-163 ---------- ---------- ---------- ---------- -----ALAQS ENSTTRP00000013015/1-449 ESTGAYAPLT GQGTILINRV LASCYAVIEE HNWAHRAFAP YRLAHALLAA ENSP00000297261/1-462 EAAGAYAPLT AQGTILINRV LASCYAVIEE HSWAHRAFAP FRLAHALLAA bmy_12671T0/1-234 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000034059/1-466 ETAGAYAPLT AHGTILINRV LASCYAVIEE HSWAHGAFAP YRLAHALLAA 401 450 BACU000743/1-163 LCLNRA---- ---------- ---------- ---------- ---------- ENSTTRP00000013015/1-449 LAPSRTDRGG -GGGGSRVPG RAR-APAVPG ATDAPGA--- SGIHWYSQLL ENSP00000297261/1-462 LAPARTDRGG DSGGGDRGGG GGRVALTAPG AADAPGAGAT AGIHWYSQLL bmy_12671T0/1-234 ---GR--RGA -GGEGIG--- ---------- ---------- ---------- ENSBTAP00000034059/1-466 LAPGRTDRGG -AGDGGGGGR VPSPAPGAPG SADAPGA--- AGIHWYSELL 451 500 BACU000743/1-163 ---------- ---------- --- ENSTTRP00000013015/1-449 YQIGTWLLDS EALHPLGMAV KSS ENSP00000297261/1-462 YQIGTWLLDS EALHPLGMAV KSS bmy_12671T0/1-234 ---------- ---------- --- ENSBTAP00000034059/1-466 YQIGTWLLDS EALHPLGMAV KSS