KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:44:06 2014 Check: 00 .. Name: ENSTTRP00000000461/1-513 Len: 518 Check: 6380 Weight: 1.00 Name: ENSP00000346827/1-518 Len: 518 Check: 8937 Weight: 1.00 Name: bmy_13966T0/1-482 Len: 518 Check: 760 Weight: 1.00 Name: BACU014440/1-518 Len: 518 Check: 1713 Weight: 1.00 Name: ENSBTAP00000033996/1-494 Len: 518 Check: 1226 Weight: 1.00 // 1 50 ENSTTRP00000000461/1-513 MFLRAGTAGL SPLRHTLRPV LVAAMSTGTF IVSQPLNYRS GARFGSVDAS ENSP00000346827/1-518 MFLRAGLAAL SPLLRSLRPS PVAAMSTGTF VVSQPLNYRG GARVEPADAS bmy_13966T0/1-482 MFLRAGLAGL SPLRRTLRPA LVAAMSTGTF VVSQPLNYRG GARVDPVDAS BACU014440/1-518 MFLRVGLAGL SPLRHTLRPA LVAAMSTGTF VVSQPLNYRG GARVDPVDAS ENSBTAP00000033996/1-494 ---------- ---------- ----MSTGTF VVSQPLNYRG GARVEPVDAS 51 100 ENSTTRP00000000461/1-513 GTEKALEPAS GRVIATFTCS GEEEVNLAIQ DAKAAFKIWS QKSGMERCRI ENSP00000346827/1-518 GTEKAFEPAT GRVIATFTCS GEKEVNLAVQ NAKAAFKIWS QKSGMERCRI bmy_13966T0/1-482 GTEKAFEPAT GRVIATFTCS GEKEVNLAVQ DAKAAFKIWS QKSGMERCRI BACU014440/1-518 GTEKAFEPAT GRVIATFTCS GEKEVNLAVQ DAKAAFKIWS QKSGMERCRI ENSBTAP00000033996/1-494 GTEKAFEPAT GRVIATFTCS GEKEVNLAVQ DAKAAFKIWS QKSGMERCRI 101 150 ENSTTRP00000000461/1-513 LLEAARIIRD RKDEIATVET INNGKSIFEA RWDIDTSWQC LEYYAGLAGS ENSP00000346827/1-518 LLEAARIIRE REDEIATMEC INNGKSIFEA RLDIDISWQC LEYYAGLAAS bmy_13966T0/1-482 LLEAARIIRD RKDEIATVET INNGKSIFEA RWDIDTSWQC LE-------- BACU014440/1-518 LLEAARIIRD RKDEIATVET INNGKSIFEA RWDIDTSWQC LEYYAGLAGS ENSBTAP00000033996/1-494 LLEAARIIRE RRDEIATMET INNGKSIFEA RWDIDTSWQC LEYYAGLAGS 151 200 ENSTTRP00000000461/1-513 MAGEHIQLPG GSFGYTRREP LGVCVGIGAW NYPFQIACWK SAPALACGNA ENSP00000346827/1-518 MAGEHIQLPG GSFGYTRREP LGVCVGIGAW NYPFQIASWK SAPALACGNA bmy_13966T0/1-482 ---------- ------RTHP A--------- --PRRIL-WL HQKGTTRGNA BACU014440/1-518 MAGEHIQLPG GSFGYTRREP LGVCVGIGAW NYPFQIACWK SAPALACGNA ENSBTAP00000033996/1-494 MAGEHIQLPG GSFGYTRREP LGVCVGIGAW NYPFQIACWK SAPALACGNA 201 250 ENSTTRP00000000461/1-513 MVFKPSPFTP VSTLLLAEIY TEAGVPPGLF NVVQGGAATG QFLCQHRDVA ENSP00000346827/1-518 MVFKPSPFTP VSALLLAEIY SEAGVPPGLF NVVQGGAATG QFLCQHPDVA bmy_13966T0/1-482 MVFKPSPFTP VSTLLLAEVY TEAGVPPGLF NVVQGGAATG QFLCQHRDVA BACU014440/1-518 MVFKPSPFTP VSTLLLAEVY TEAGVPPGLF NVVQGGAATG QFLCQHRDVA ENSBTAP00000033996/1-494 MVFKPSPFTP VSVLLLAEIY TEAGVPPGLF NVVQGGAATG QFLCQHRDVA 251 300 ENSTTRP00000000461/1-513 KVSFTGSVPT GSKIMEMSAK GIKPVTLELG GKSPLIIFSD CDMKNAVKGA ENSP00000346827/1-518 KVSFTGSVPT GMKIMEMSAK GIKPVTLELG GKSPLIIFSD CDMNNAVKGA bmy_13966T0/1-482 KVSFTGSVPT GSKIMEMSAK GIKPVTLELG GKSPLIIFSD CDMKNAVKGA BACU014440/1-518 KVSFTGSVPT GSKIMEMSAK GIKPVTLELG GKSPLIIFSD CDMKNAVKGA ENSBTAP00000033996/1-494 KVSFTGSVPT GSKIMEMSAK GIKPVTLELG GKSPLIIFSD CDMKNAVKGA 301 350 ENSTTRP00000000461/1-513 LMANFLTQGE V-CNGT-VFV -KEILDQFSE EV--KQTRIK XXXXXXXXXX ENSP00000346827/1-518 LMANFLTQGQ VCCNGTRVFV QKEILDKFTE EVVKQTQRIK IGDPLLEDTR bmy_13966T0/1-482 LMANFLTQGE VCCNGTRVFV QKEILDQFTE EVVKQTQRIK IGDPLLEDTR BACU014440/1-518 LMANFLTQGE VCCNGTRVFV QKEILDQFTE EVVKQTQRIK IGDPLLEDTR ENSBTAP00000033996/1-494 LMANFLTQGE VCCNGTRVFV QKEILDQFTE EVVKQTQRIK IGDPLLEDTR 351 400 ENSTTRP00000000461/1-513 XXXXXXXXXX XXXXXFVKVA KEQGAKVLCG GDLYVPEDPK LKDGYYMRPC ENSP00000346827/1-518 MGPLINRPHL ERVLGFVKVA KEQGAKVLCG GDIYVPEDPK LKDGYYMRPC bmy_13966T0/1-482 MGPLINRPHL ERVLGFVKVA KEQGAKVLCG GDLYVPEDPK LKDGYYMRPC BACU014440/1-518 MGPLINRPHL ERVLGFVKVA KEQGAKVLCG GDLYVPEDPK LKDGYYMRPC ENSBTAP00000033996/1-494 MGPLINRPHL ERVLGFVKVA KEQGAKVLCG GDVFVPEDPK LKDGYYMRPC 401 450 ENSTTRP00000000461/1-513 VLTNCRDDMT CVKEEIFGPV MSILSFDTEA EVLERANDTT FGLAAGVFTR ENSP00000346827/1-518 VLTNCRDDMT CVKEEIFGPV MSILSFDTEA EVLERANDTT FGLAAGVFTR bmy_13966T0/1-482 VLANCRDDMT CVKEEIFGPV MSILSFDTEA EVLERANDTT FGLAAGVFTR BACU014440/1-518 VLANCRDDMT CVKEEIFGPV MSILSFDTEA EVLERANDTT FGLAAGVFTR ENSBTAP00000033996/1-494 VLTNCRDDMT CVKEEIFGPV MSILSFDTEA EVLERANDTT FGLAAGVFTR 451 500 ENSTTRP00000000461/1-513 DIQRAHRVVA ALQAGMCFIN NYNVSPVELP FGGYKKSGFG RENGRVTIEY ENSP00000346827/1-518 DIQRAHRVVA ELQAGTCFIN NYNVSPVELP FGGYKKSGFG RENGRVTIEY bmy_13966T0/1-482 DIQRAHRVVA ELQAGICFIN NYNVSPVELP FGGYKKSGFG RENGRVTIEY BACU014440/1-518 DIQRAHRVVA ELQAGMCFIN NYNVSPVELP FGGYKKSGFG RENGRVTIEY ENSBTAP00000033996/1-494 DIQRAHRVVA ELQAGMCFIN NYNVSPVELP FGGYKKSGFG RENGRVTIEY 501 550 ENSTTRP00000000461/1-513 YSQLKTVCVE MGDVESAF ENSP00000346827/1-518 YSQLKTVCVE MGDVESAF bmy_13966T0/1-482 YSQLKTVCVE MGDVESAF BACU014440/1-518 YSQLKTVCVE MGDVESAF ENSBTAP00000033996/1-494 YSQLKTVCVE MGDVESAF