KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:43:52 2014 Check: 00 .. Name: ENSBTAP00000033817/1-408 Len: 420 Check: 4318 Weight: 1.00 Name: ENSP00000396441/1-375 Len: 420 Check: 4620 Weight: 1.00 Name: ENSTTRP00000001046/1-396 Len: 420 Check: 8641 Weight: 1.00 Name: bmy_03422T0/1-398 Len: 420 Check: 8467 Weight: 1.00 Name: BACU003934/1-397 Len: 420 Check: 3739 Weight: 1.00 // 1 50 ENSBTAP00000033817/1-408 -----MSITP EVKSRGMKFA EEQLLKHGWT QGKGLGRKEN GITQALRVTL ENSP00000396441/1-375 MFPRSGPSND EVKSRGMKFA EEQLLKHGWT QGKGLGRKEN GITQALRVTL ENSTTRP00000001046/1-396 -----MSVTP EVKSRGMKFA EEQLLKHGWT RGKGLGRKEN GITQALRITL bmy_03422T0/1-398 -----MSVTP EVKSRGMKFA EEQLLKHGWT QGKGLGRKEN GITQALRVTL BACU003934/1-397 -----MSVTP EVKSRGMKFA EEQLLKHGWT QGKGLGRKEN GITQALRVTL 51 100 ENSBTAP00000033817/1-408 KQDTYGVGHD PAKEFTNHWW NDLFNKTAAN LVVETRQDGV QIRRLSKETT ENSP00000396441/1-375 KQDTHGVGHD PAKEFTNHWW NELFNKTAAN LVVETGQDGV QIRSLSKETT ENSTTRP00000001046/1-396 KQDTHGVGHD PAKEFTNHWW NDLFNKTAAS LVVKTGQDGV QIRCLSKETT bmy_03422T0/1-398 KQDTHGVGHD PAKEFTNYWW NDLFNKTAAS LVVKTGQDGV QIRCLSKETT BACU003934/1-397 KQDTHGVGHD PAKEFTNYWW NDLFNKTAAS LVVKTGQDGV QIRCLSKETT 101 150 ENSBTAP00000033817/1-408 RQDHAKPNLL YQKFVKTATL TSSGEKPDKD WESCSDDDSQ EPKPPNVLTD ENSP00000396441/1-375 RYNHPKPNLL YQKFVKMATL TSGGEKPNKD LESCSDDDNQ GSKSPKILTD ENSTTRP00000001046/1-396 RHDPSKPNLL YQKFVKTATL TSSGEKPDKD LESCSDDDSQ GSKPPKILTD bmy_03422T0/1-398 RHDHAKPNLL YQKFVKTATL TSSGEKPDKD LESCSDDDSQ GPKPPKILTD BACU003934/1-397 RHDHAKPNLL YQKFVKTATL TSSGEKPDKD LESCSDDDSQ GPKPPKILTD 151 200 ENSBTAP00000033817/1-408 EMLLQACEGR TAHKAARLGI TMKAKLARLE AQEQAFLAQL KGQDPGVPQL ENSP00000396441/1-375 EMLLQACEGR TAHKAARLGI TMKAKLARLE AQEQAFLARL KGQDPGAPQL ENSTTRP00000001046/1-396 EMMLQACEGR TAHKAARLGI TMKAKLARLE AQEQAFLARL KGQDPGVLQL bmy_03422T0/1-398 EMLLQACEGR TAHKAARLGI TMKAKLARLE AQEQAFLACL KGQDPGVPQL BACU003934/1-397 EMLLQACEGR TAHKAARLGI TMKAKLARLE AQEQAFLARL KGQDPGVPQL 201 250 ENSBTAP00000033817/1-408 QSESKSPKKK KKKRKQKEEE EPTTTERS-- AEKYSEHTDE SIRKSKKKKR ENSP00000396441/1-375 QSESKPPKKK KKKRRQKEEE EATASERNDA DEKHPEHAEQ NIRKSKKKKR ENSTTRP00000001046/1-396 QSESKPPQKK KKKRKQKEEE EATATERN-- AEEYPEHTDQ SVRKSKKKKR bmy_03422T0/1-398 QSESKPPQKK KKKRKQKEEX EAMATERN-- AEEYPEHTDQ SVRKSKKKKR BACU003934/1-397 QSESKPPQKK KKKRKQKEEE EATATERN-- AEEYPEHTDQ SVRKSKKKKR 251 300 ENSBTAP00000033817/1-408 QHQEERVTDE REGTAIENE- EETIRTGGLG ELKNREHVDR SFRK-KKRRG ENSP00000396441/1-375 RHQEGKVSDE REGTTKGNEK EDAAGTSGLG ELNSREQTNQ SLRKGKKKKR ENSTTRP00000001046/1-396 RHQEESVTDE REGTAVRHEE EETTGTSGLG EFKNREQTDQ SLRKRKKKRG bmy_03422T0/1-398 RHQEESVTDE REGTAVRHEE EETTGTSGLG ELKNREQTDE SLRKRKKKRR BACU003934/1-397 RHQEEGVTDE REGTAVRHEE EETTGTSGLG ELKNREQTDQ SLRKRKKKRR 301 350 ENSBTAP00000033817/1-408 QHHEERAELA VLDNEGGKVA VSEVGTEEAE RRVYTHPCGR S---KKRRQH ENSP00000396441/1-375 WHHEEEKMGV LEEGGKGKEA AGSVRTEEVE SRAYADPCSR R---KKRQQQ ENSTTRP00000001046/1-396 SE-EEDFNM- -------EEA VVDGGNREAE SRSCSDRKSR RSKKKRQRHQ bmy_03422T0/1-398 QHEEEDLNV- -------EEA VVDGGTREAE SRSXSDRKSR RSKKKRQRHQ BACU003934/1-397 QH-EEDLNM- -------EEA VVDGGTREAE SRSCSDRKSR RSKKKRQRHQ 351 400 ENSBTAP00000033817/1-408 EEEDLNTEDE EVEEALVDSG TREAESRSCS DQKRGRSKKK RRQYQEEEVL ENSP00000396441/1-375 EEEDLNLE-- ---------- ---------- ----DRGEET FRWWNQGS-- ENSTTRP00000001046/1-396 EEEDVLHVGD EGEEE--GGR ARTAESKAYT GSS-GKGKKR QKQPEEER-- bmy_03422T0/1-398 EEEDVLHVRD EGDEE--DGR TRTAESKAYT GSS-GRGKKT QKQPEEER-- BACU003934/1-397 EEEDVLRVRD KGDEE--DGR TRTAESKAYT GSS-GRGKKR QKQPEEER-- 401 450 ENSBTAP00000033817/1-408 DGPGVNTAQK AKKKKQKKRD ENSP00000396441/1-375 ---------- ----REQSMQ ENSTTRP00000001046/1-396 --PGVHTDQR AKK-KKQKRN bmy_03422T0/1-398 --PGVHTDQR AKKKKQKKRN BACU003934/1-397 --PGVHTDQR AKKKKQKKRN