KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:43:15 2014 Check: 00 .. Name: ENSP00000420140/1-309 Len: 310 Check: 3243 Weight: 1.00 Name: ENSBTAP00000033468/1-300 Len: 310 Check: 9375 Weight: 1.00 Name: ENSTTRP00000013844/1-308 Len: 310 Check: 8232 Weight: 1.00 Name: bmy_14115T0/1-285 Len: 310 Check: 8307 Weight: 1.00 Name: BACU020224/1-300 Len: 310 Check: 8238 Weight: 1.00 // 1 50 ENSP00000420140/1-309 MSKIRGLPPE VREPGPGVEL GVENGLLCQL IHSPEFNLFS NSVVFESNFI ENSBTAP00000033468/1-300 MSKIPGLPPE VREPGPGVEL GVEDGLLCQL IHSPEFNLFS DSVVFESIFI ENSTTRP00000013844/1-308 MSKIRSLPPE VMEPGPGVEL GVEDGLLCQL IHSPEFNLFS DSVVFESNFI bmy_14115T0/1-285 MSKIRSLPPE VREPGPGVEL GVEDGLLCQL IHSPEFNLFS DSVVFESNFI BACU020224/1-300 MSKIRSLPPE VREPGPGVEL GVEDGLLCQL IHSPEFNLFS DSVVFESNFI 51 100 ENSP00000420140/1-309 QTHVPEADFQ VTKPGNWRDV CEGSATVILG VTSSVPSLPL PNVLLMANVT ENSBTAP00000033468/1-300 Q--------- VTKPGNWMDD CEGPTTVILG VTSSVPSLPL PNILLMANVT ENSTTRP00000013844/1-308 QTHVPGADF- VTKAGNWMDV CDGSTTVILG VTSSVPSLPL PNVLLMANVT bmy_14115T0/1-285 Q--------- VTKLGNWMDV CEGSTTVILG VTSSVPSLPL PNVLLMANVT BACU020224/1-300 Q--------- VTKPGNWMDV CEGSTTVILG VTSSVPSLPL PNVLLMANVT 101 150 ENSP00000420140/1-309 WPQGPFTTWS TPGDAPVINL SRLLPLKYVE LRIYDRLQRI LRVRTVTEKI ENSBTAP00000033468/1-300 WPQGQFSTWS TPGSAPVITL SRILPLKYVE LRIYDRLQRI LRVRTVTEKI ENSTTRP00000013844/1-308 WPQGQFSTCS TPDSAPVITL SRILPLKYVE LRICDRLQRI LRVRTVTEKI bmy_14115T0/1-285 WHQGQFSTWS XPGSAPVITL SRILPLKYVE LRICDRLQRI LRVRTVTEKI BACU020224/1-300 WPQGQFSTWS TPGSAPVITL SRILPLKYVE LRICDRLQRI LRVRTVTEKI 151 200 ENSP00000420140/1-309 YYLKLHEKHP EIVFQFWVRL VKILQKGLSI TTKDPRIKFT HCLVPKMPTN ENSBTAP00000033468/1-300 YYLRLHEKYP ETVFQFWTRL VNILQRGLSI TTKDPRIRIS HCLVPKLPCR ENSTTRP00000013844/1-308 FYLRLHEKHP EAVFQFWIRL VKILRRGLSI TTKDPRIQFS HCLVPKLPCS bmy_14115T0/1-285 YYLRLHEKHP EAVFQFWIRL VKILRRGLSI TTKDPRIQFS HCLVPKLPCS BACU020224/1-300 YYLRLHEKHP EAVFQFWIRL VKILRRGLSI TTKDPRIQFS HCLVPKLPCS 201 250 ENSP00000420140/1-309 STETTPENSL LSSPQPSEPL VLLAAEQTSG SFSQLSGKPQ LTADRNNDTA ENSBTAP00000033468/1-300 SAETS-ESSL PSSSRPSESS MLLAAEQNSD RFLNLSGTSQ LTVHRNTNSA ENSTTRP00000013844/1-308 STETS-GSGL LSSCQSSESS MLLAAEQTSD CFSNLSGRSQ LTADRNTDTT bmy_14115T0/1-285 STETS-GSSL LSSCQSSESS M--------- --KALGSR-- --ADQNTDTT BACU020224/1-300 STETS-GSSL LSSCQSSESS MLLAAEQTSD CFSNLSGRSQ LTADRNTDTT 251 300 ENSP00000420140/1-309 IEIDNCSSY- KIPSPVASPI NLNIPMRAAL SHSLWEQEDW NEHLLQVHIA ENSBTAP00000033468/1-300 TEIETFNCKD NTSSPASSPV ISNIPMRAAL SHSLWEQENA DEYHIQAPVA ENSTTRP00000013844/1-308 TEIDNFNCSD KTPSPVASPV NANIPMRATL NHSLWEQENP EEHFLQAPVA bmy_14115T0/1-285 AEIDNFNCYD KTPSPVASPV NSNIPMRATL SHSLWEQENP EEYFLQAPVA BACU020224/1-300 AEIDNFNCYD KTPSPVASPV NSNIPMRATL SHSLWEQENP EEHFLQAPVA 301 350 ENSP00000420140/1-309 SYLGEHFLGA ENSBTAP00000033468/1-300 SSLGENFWGP ENSTTRP00000013844/1-308 SSLGENFLGP bmy_14115T0/1-285 SSLGENFLGP BACU020224/1-300 SSLGENFLGP