KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:40:27 2014 Check: 00 .. Name: ENSP00000448182/1-691 Len: 693 Check: 4275 Weight: 1.00 Name: ENSBTAP00000030401/1-675 Len: 693 Check: 8282 Weight: 1.00 Name: bmy_14375T0/1-368 Len: 693 Check: 7207 Weight: 1.00 Name: BACU016420/1-691 Len: 693 Check: 1772 Weight: 1.00 Name: ENSTTRP00000006544/1-679 Len: 693 Check: 7822 Weight: 1.00 // 1 50 ENSP00000448182/1-691 MAAAGVVSGK -IIYEQEGVY IHSSCGKTND QDGLISGILR VLEKDAEVIV ENSBTAP00000030401/1-675 CIPVGHCTGT MIIYEQEGVY IHSSLGKTND QDSLISGILR VLEKDAEVIV bmy_14375T0/1-368 ---------- ---------- ---------- ---------- ----DAEVIV BACU016420/1-691 MAAAGVVSGK -IIYEQEGVY IHSSFGKTSD QDSLISGILR VLEKDAEVIV ENSTTRP00000006544/1-679 ---------- -IIYEQEGVY IHSSFGKTSD QDSLISGILR VLEKDAEVIV 51 100 ENSP00000448182/1-691 DWRPLDDALD SSSILYARKD SSSVVEWTQA PKERGHRGSE HLNSYEAEWD ENSBTAP00000030401/1-675 DWRPLDDALD SSSILYAGKD SSSVVEWTQA PKERAHRVAE HLNSYEAEWD bmy_14375T0/1-368 DWRPLDDALD SSSILYAGKD SSSVVEWTQA PKERAHRGLE HLNSYEAEWD BACU016420/1-691 DWRPLDDALD SSSILYAGKD SSSVVEWTQA PKERAHRGLE HLNSYEAEWD ENSTTRP00000006544/1-679 DWRPLDDALD SSSILYAGKD SSSVVEWTQA PKERAHRGLE HLNSYEAEWD 101 150 ENSP00000448182/1-691 MVNTVSFKRK PHTNGDAPSH RNGKSKWSFL FSLTDLKSIK QNKEGMGWSY ENSBTAP00000030401/1-675 MVNTVSFKKK PHTNGDAPSH RNGKSKWSFL FSLTDLKSIK QNKEGMGWSY bmy_14375T0/1-368 MVNAISFKKK PHTNGDAPSH RNGKSKWSFL FSLTDLKSIK QNKEGMGWSY BACU016420/1-691 MVNTISFKKK PHTNGDAPSH RNGKSKWSFL FSLTDLKSIK QNKEGMGWSY ENSTTRP00000006544/1-679 MVNTISFKKK PHTNGDAPSH RNGKSKWSFL FSLTDLKSIK QNKEGMGWSY 151 200 ENSP00000448182/1-691 LVFCLKDDVV LPALHFHQGD SKLLIESLEK YVVLCESPQD KRTLLVNCQN ENSBTAP00000030401/1-675 LVFCLKDDVV LPALHFHQGD SKLLIDSLEK YVALCESPQD KRTLLVNCQN bmy_14375T0/1-368 LVFCLKDDVV LPALHFHQGD SKLLIDSLEK YVVLCESPQD KRTLLVNCQN BACU016420/1-691 LVFCLKDDVV LPALHFHQGD SKLLIDSLEK YVVLCESPQD KRTLLVNYQN ENSTTRP00000006544/1-679 LVFCLKDDVV LPALHFHQGD SKLLIDSLEK YVVLCESPQD KRTLLVNCQN 201 250 ENSP00000448182/1-691 KSLSQSFENL LDEPAYGLIQ AGLLDRRKLL WAIHHWKKIK KDPYTATMIG ENSBTAP00000030401/1-675 KSLSQSFENL LDEPAYGLIQ ---------- -------KIK KDPYTATMVG bmy_14375T0/1-368 KSLSQSFENL LDEPAYGIIQ ---------- -------KIK KDPYTATMVG BACU016420/1-691 KSLSQSFENL LDEPAYGIIQ AGLLERRKLL WAVHQWKKIK KDPYTATMVG ENSTTRP00000006544/1-679 KSLSQSFENL LDEPAYGIIQ AGLLERRKLL WAVHQWKKIK KDPYTATMVG 251 300 ENSP00000448182/1-691 FSKVTNYIFD SLRGSDPSTH QRPPSEMADF LSDAIPGLKI NQQEEPGFEV ENSBTAP00000030401/1-675 FSKVTNYIFD SLRGSDPSVH QRPPSEMADF LSDAIPGLKI NQQEEPGFEV bmy_14375T0/1-368 FSKVTNYIFD SLRGSDPSAH QRPPTEMADF LSDAIPGLKI NQQEEPGFEV BACU016420/1-691 FSKVTNYIFD SLRGSDPSAH QRPPTEMADF LSDAIPGLKI NQQEEPGFEV ENSTTRP00000006544/1-679 FSKVTNYIFD SLRGSDPSAH QRPPSEMADF LSDAIPGLKI NQQEEPGFEV 301 350 ENSP00000448182/1-691 ITRIDLGERP VVQRREPVSL EEWTKNIDSE GRILNVDNMK QMIFRGGLSH ENSBTAP00000030401/1-675 ITKIDLGERP VVQRREPVSL EEWTKNVDSE GRILNVDNMK QMIFRGGLSH bmy_14375T0/1-368 ITRIDLGERP VVQRREPVSL EEWTKNIDSE GRILNVDNMK QMIFRGGLSH BACU016420/1-691 ITRIDLGERP VVQRREPVSL EEWTKNIDSE GRILNVDNMK QMIFRGGLSH ENSTTRP00000006544/1-679 ITRIDLGERP VVQRREPVSL EEWTKNIDSE GRILNVDNMK QMIFRGGLSH 351 400 ENSP00000448182/1-691 ALRKQAWKFL LGYFPWDSTK EERTQLQKQK TDEYFRMKLQ WKSISQEQEK ENSBTAP00000030401/1-675 ALRKQAWKFL LGYFPWDSTK EERTQLQKQK TDEYFRMKLQ WKSVSEEQEK bmy_14375T0/1-368 VLRKQAWKFL LGYFPWDSTK EERTQLQKQK IDEYFRMKLQ WKSVSEEQEK BACU016420/1-691 VLRKQAWKFL LGYFPWDSTK EERTQLQKQK IDEYFRMKLQ WKSVSEEQEK ENSTTRP00000006544/1-679 VLRKQAWKFL LGYFPWDSPK EERIQL--QK TDEYFRMKLQ WKSVSEEQEK 401 450 ENSP00000448182/1-691 RNSRLRDYRS LIEKDVNRTD RTNKFYEGQD NPGLILLHDI LMTYCMYDFD ENSBTAP00000030401/1-675 RNSRLRDYRS LIEKDVNRTD RTNKFYEGQD NPGLILLHDI LMTYCMYDFD bmy_14375T0/1-368 RNSRLRDYRS LIG------- ---------- ---------- ---------- BACU016420/1-691 RNSRLRDYRS LIEKDVNRTD RTNKFYEGQD NPGLILLHDI LMTYCMYDFD ENSTTRP00000006544/1-679 RNSRLRDYRS LIEKDVNRTD RTNKFYEGQD NPGLILLHDI LMTYCMYDFD 451 500 ENSP00000448182/1-691 LGYVQGMSDL LSPLLYVMEN EVDAFWCFAS YMDQMHQNFE EQMQGMKTQL ENSBTAP00000030401/1-675 LGYVQGMSDL LSPLLYVMEN EVDAFWCFAS YMDQMHQNFE EQMQGMKTQL bmy_14375T0/1-368 ---------- ---------- ---------- ---------- ---------- BACU016420/1-691 LGYVQGMSDL LSPLLYVMEN EVDAFWCFAS YMDQMHQNFE EQMQGMKTQL ENSTTRP00000006544/1-679 LGYVQGMSDL LSPLLYVMEN EVDAFWCFAS YMDQMHQNFE EQMQGMKTQL 501 550 ENSP00000448182/1-691 IQLSTLLRLL DSGFCSYLES QDSGYLYFCF RWLLIRFKRE FSFLDILRLW ENSBTAP00000030401/1-675 IQLSTLLRLL DSGFCSYLES QDSGYLYFCF RWLLIRFKRE FSFLDILRLW bmy_14375T0/1-368 ---------- ---------- ---------- ---------- -NFFLILKMR BACU016420/1-691 IQLSTLLRLL DSGFCSYLES QDSGYLYFCF RWLLIRFKRE FSFLDILRLW ENSTTRP00000006544/1-679 IQLSTLLRLL DSGFCSYLES QDSGYLYFCF RWLLIRFKRE FSFLDILRLW 551 600 ENSP00000448182/1-691 E-VMWTELPC TNFHLLLCCA ILESEKQQIM EKHYGFNEIL KHINELSMKI ENSBTAP00000030401/1-675 E-VMWTELPC KNFHLLLCCA ILESEKQQIM EKHYGFNEIL KHINELSMKI bmy_14375T0/1-368 ERVAW----- ---------- ---------- ---------- ---------- BACU016420/1-691 E-VMWTELPC KNFHLLLCCA ILESEKQQIM EKHYGFNEIL KHINELSMKI ENSTTRP00000006544/1-679 E-VMWTELPC KNFHLLLCCA ILESEKQQIM EKHYGFNEIL KHINELSMKI 601 650 ENSP00000448182/1-691 DVEDILCKAE AISLQMVKCK ELPQAVCEIL GLQGSEVTTP DSDVGEDENV ENSBTAP00000030401/1-675 DVEDVLCKAE AISLQMVKCK ELPQAVCEIL GLQDSEVTTP DSDNGEDENT bmy_14375T0/1-368 ---------- -------KC- ---------- ---------- ---------- BACU016420/1-691 DVEDVLCKAE AISLQMVKCK ELPQAVCEIL GLQDSEVTTP DSDNGEDENV ENSTTRP00000006544/1-679 DVEDVLCKAE AISLQMVKCK ELPQAVCEIL GLQDSEVTTP DSDNGEDENV 651 700 ENSP00000448182/1-691 VMTPCPTSAF QSNALPTLSA SGARNDSPTQ IPVSSDVCRL TPA ENSBTAP00000030401/1-675 GMTICPASAF QSNLLPVLTA SGGRDDNPTE ISMSPNVSRL TPA bmy_14375T0/1-368 ---------- ---------- ---------- ---------- --- BACU016420/1-691 GMTSCPTSAF QSNSLPVLAA SGARDDNPTE ISMSPNVSRV TPA ENSTTRP00000006544/1-679 GMTSCPTSAF QSNSLPVLAA SGARDDNPAE ISMSPNVSRV TPA