KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:39:47 2014 Check: 00 .. Name: ENSP00000262995/1-724 Len: 751 Check: 8471 Weight: 1.00 Name: ENSBTAP00000029800/1-694 Len: 751 Check: 6554 Weight: 1.00 Name: bmy_03462T0/1-496 Len: 751 Check: 769 Weight: 1.00 Name: BACU013547/1-670 Len: 751 Check: 9174 Weight: 1.00 Name: ENSTTRP00000002733/1-700 Len: 751 Check: 2503 Weight: 1.00 // 1 50 ENSP00000262995/1-724 MSGGEVVCSG WLRKSPPEKK LKRYAWKRRW FVLRSGRLTG DPDVLEYYKN ENSBTAP00000029800/1-694 MSGGEVVCSG WLRKSPPEKK LKRYAWKRRW FVLRSGRLTG DPDVLEYYKN bmy_03462T0/1-496 ---------- ---------- ---------- ---------- ---------- BACU013547/1-670 ---------- ---------- ----AWKRRW FVLRSGRLTG DPDVLEYYKN ENSTTRP00000002733/1-700 ---------- ---------- ----AWKRRW FVLRSGRLTG DPDVLEYYKN 51 100 ENSP00000262995/1-724 DHAKKPIRII DLNLCQQVDA GLTFNKKEFE NSYIFDINTI DRIFYLVADS ENSBTAP00000029800/1-694 DHAKKPIRII DLNLCQQVDA GLTFNKKEFE NSYIFDINTI DRIFYLVADS bmy_03462T0/1-496 ---------- ---------- ---------- ---------- ---------- BACU013547/1-670 DHAKKPIRII DLNLCQQVDA GLTFNKKEFE NSYIFDINTI DRIFYLVADS ENSTTRP00000002733/1-700 DHAKKPIRII DLNLCQQVDA GLTFNKKEFE NSYIFDINTI DRIFYLVADS 101 150 ENSP00000262995/1-724 EEEMNKWVRC ICDICGFNPT EEDPVKPPGS SLQAPADLPL AINTAPPSTQ ENSBTAP00000029800/1-694 EEEMNKWVRC ICDICGFNPT EEDPVKAPGS SLQAPADIPL AISTAPPSSQ bmy_03462T0/1-496 ---------- ---------- -ADPVKPPGS SLPAPADLPL AINTAPPSTQ BACU013547/1-670 EEEMNKWVRC ICDICGFNPT EEDPVKPPGS SLPAPADLPL AINTAPPSTQ ENSTTRP00000002733/1-700 EEEMNKWVRC ICDICGFNPT EEDPVKPPGS SLQAPADLPL AINTAPPSTQ 151 200 ENSP00000262995/1-724 ADSSSATLPP PYQLINVPPH LETLGIQEDP QDYLLLINCQ SKKPEPT--- ENSBTAP00000029800/1-694 VGASAAAAPP PYQLISLPPH LETLGIQEDP QDYLLLINCQ SKKPEPT--- bmy_03462T0/1-496 VDASSAAPPP PYQLISLPPH LETLGIQEDP QDYLLLINCQ SKKPEPTSQG BACU013547/1-670 GDASSAAPPP PYQLISLPPH LETLGIQEDP QDYLLLINCQ SKKPEPT--- ENSTTRP00000002733/1-700 VDASSAAPPP PYQLISLPPH LETLGIQEDP QDYLLLINCQ SKKPEPT--- 201 250 ENSP00000262995/1-724 ---------- ---------- ----RTHADS AKSTSSETDC NDNVPSHKNP ENSBTAP00000029800/1-694 ---------- ---------- ----RTHADS AKSTSSETDC NDNVPSHKNP bmy_03462T0/1-496 SSFVSEEGEE YLLLEDFESK TIPLQTHADS AKSTPSETDC NDNVPSHKNP BACU013547/1-670 ---------- ---------- ----RTHADS AKSTPSETDC NDNVPAHKNP ENSTTRP00000002733/1-700 ---------- ---------- ----RTHADS AKSTPSETDC NDNVPSHKNP 251 300 ENSP00000262995/1-724 ASSQSKHGMN GFFQQQMIYD SPPSRAPSAS VDSSLYNLPR SYSHDVLPKV ENSBTAP00000029800/1-694 ASSQSKHGVN GFFQQHMMYD SPPSRAASLS VDSSLYNLPR SYSHDVLPKV bmy_03462T0/1-496 ASSQSKHGVN GFFQQQMMYD SPPSRAASVS IDSSLYNLPR SHSHDVLPKV BACU013547/1-670 ASSQSKHGVN GFFQQQMMYD SPPSRAASVS VDSSLYNLPR SHSHDVLPKV ENSTTRP00000002733/1-700 ASSQSKHGVN GFFQQQMMYD SPPSRAASIS VDSSLYNLPR SHSHDVLPKV 301 350 ENSP00000262995/1-724 SPSSTEADGE LYVFNTPSGT SSVETQMRHV SISYDIPPTP GNTYQIPRTF ENSBTAP00000029800/1-694 SPSSTEADGE LYVFNTPSGT SSVEPQMRHV SISYDIPPTP GNTYQIPRTF bmy_03462T0/1-496 SPSSTEADGE LYVFNTPSGT SSVEPQMRHV SISYDIPPTP GNTYQIPRTF BACU013547/1-670 SPSSTEADGE LYVFNTPSGT SSVEPQMRHV SISYDIPPTP GNTYQIPRTF ENSTTRP00000002733/1-700 SPSSTEADGE LYVFNTPSGT SSVEPQMRHV SISYDIPPTP GNTYQIPRTF 351 400 ENSP00000262995/1-724 PEGTLGQTSK LDTIPDIPPP RPPKPHPAHD RSPVETCSIP RTASDTDSSY ENSBTAP00000029800/1-694 PEGTLGQTSK LDTIPDIPPP RPPKPHPAHD RSPVDTCSIT RTASDTDSSY bmy_03462T0/1-496 PEGTLGQTSK LDTIPDIPPP RPPKPHPAHD RSPVDTCSIT RTASDTDSSY BACU013547/1-670 PEGTLGQTSK LDTIPDIPPP RPPKPHPAHD RSPVDTCSIT RTASDTDSSY ENSTTRP00000002733/1-700 PEGTLGQTSK LDTIPDIPPP RPPKPHPAHD RSPVDTCSIT RTASDTDSSY 401 450 ENSP00000262995/1-724 CIPTAGMSPS RSNTISTVDL NKLRKDASSQ DCYDIPRAFP SDRSSSLEGF ENSBTAP00000029800/1-694 CIPTAGLPPS RSNTISTVDL NKLRKDASSQ DCYDTPRTFP SDRSSSLEGF bmy_03462T0/1-496 CIPTAGVPPS RSNTISTVDL NKLRKDASSQ DCYDIPRTFP TDRSSSLEGF BACU013547/1-670 CIPTAGVPPS RSNTISTVDL NKLRKDASSQ DCYDIPRTFP TDRSSSLEGF ENSTTRP00000002733/1-700 CIPTAGVPPS RSNTISTVDL NKLRKDASSQ DCYDIPRTFP TDRSSSLEGF 451 500 ENSP00000262995/1-724 HNHFKVKNVL TVGSVSSEEL DENYVPMNPN SPPRQHSSSF TEPIQEANYV ENSBTAP00000029800/1-694 HNHFKIKNIL TAGSVSSEEL DENYVPMNPN SPPRQHSSSF TEPIQEANYV bmy_03462T0/1-496 HNHFKIKNVL TVGSVSSEEL DENYVPMNPN SPPRQHSSSF TEPIQEANYV BACU013547/1-670 HNHFKIKNVL TVGSVSSEEL DENYVPMNPN SPPRQHSSSF TEPIQEANYV ENSTTRP00000002733/1-700 HNHFKIKNVL TVGSVSSEEL DENYVPMNPN SPPRQHSSSF TEPIQEANYV 501 550 ENSP00000262995/1-724 PMTPGTFDFS SFGMQVPPPA HMGFRSSPKT PPRRPVPVAD CEPPPVDRNL ENSBTAP00000029800/1-694 PMTPGTFDFS SFGMQVPPPA HMGFRSSPKT PPRRPVPVAD CEPPPVDRNL bmy_03462T0/1-496 PMTPGTFDFS SFGMQVPPPA HMGFRSSPKT PPRRPVPVAD CEPPPVDRNL BACU013547/1-670 PMTPGTFDFS SFGMQVPPPA HMGFRSSPKT PPRRPVPVAD CEPPPVDRNL ENSTTRP00000002733/1-700 PMTPGTFDFS SFGMQVPPPA HMGFRSSPKT PPRRPVPVAD CEPPPVDRNL 551 600 ENSP00000262995/1-724 KPDRKGQSPK ILRLKPHGLE RTDSQTIGDF ATRRKVKPAP LEIKPLPEWE ENSBTAP00000029800/1-694 KPD------- ---------- ---------- ---RKVKPAP LEIKPLPEWE bmy_03462T0/1-496 KPDRKGQSPK ILRPKPHGLE RTDSQTIGDF ATRRKVKPAP LEIKPLPEWE BACU013547/1-670 KPD------- ---------- ---------- ---RKVKPAP LEIKPLPEWE ENSTTRP00000002733/1-700 KPDRKGQSPK ILRPKPHGLE RTDSQTIGDF ATRRKVKPAP LEIKPLPEWE 601 650 ENSP00000262995/1-724 ELQAPVRSPI TRSFARDSSR FPMSPRPDSV HSTTSSSDSH DSEENYVPMN ENSBTAP00000029800/1-694 ELQAPVRSPI TRSFARDSSR FPLSPRPDSV HSTTSSSDSH DSEENYVPMN bmy_03462T0/1-496 ELQAPVRSPI TRSFARE--- ---------- ---------- ---------- BACU013547/1-670 ELQAPVRSPI TRSFARDSSR FPMSPRPDSV HSTTSSSDSH DSEENYVPMN ENSTTRP00000002733/1-700 ELQAPVRSPI TRSFARDSSR FPMSPRPDSV HSTTSSSDSH DSEENYVPMN 651 700 ENSP00000262995/1-724 PNLSSEDPNL FGSNSLDGGS SPMIKPKGDK QVEYLDLDLD SGKSTPPRKQ ENSBTAP00000029800/1-694 PNLSSEDSNL FGSNSLDGGN SPMIKPKGDK QVEYLDLDLD SGKSTPPRKQ bmy_03462T0/1-496 ---------- ---------- ---------- ---------- ---------- BACU013547/1-670 PNLSSEDSNL FGSNSLDGGS SPMIKPKGDK QVEYLDLDLD SGKSTPPRKQ ENSTTRP00000002733/1-700 PNLSSEDSNL FGSNSLDGGN SPMIKPKGDK QVEYLDLDLD SGKSTPPRKQ 701 750 ENSP00000262995/1-724 KSSGSGSSVA DERVDYVVVD QQKTLALKST REAWTDGRQS TESETPAKSV ENSBTAP00000029800/1-694 KSSGSGSSVA DERVDYVVVD QQKTLALKST REAWTDGRQS TESETPAKNV bmy_03462T0/1-496 ---------- ---------- ---------- ---------- ---------- BACU013547/1-670 KSSGSGSSVA DERVDYVVVD QQKTLALKST REAWTDGRQS TESETPAKNV ENSTTRP00000002733/1-700 KSSVSGSSVA DERVDYVVVD QQKTLALKST REAWTDGRQS TESETPAKNV 751 800 ENSP00000262995/1-724 K ENSBTAP00000029800/1-694 K bmy_03462T0/1-496 - BACU013547/1-670 K ENSTTRP00000002733/1-700 K