KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:39:28 2014 Check: 00 .. Name: ENSTTRP00000006487/1-1062 Len: 1267 Check: 2140 Weight: 1.00 Name: ENSBTAP00000029554/1-1063 Len: 1267 Check: 4733 Weight: 1.00 Name: ENSP00000352834/1-1063 Len: 1267 Check: 8427 Weight: 1.00 Name: bmy_00168T0/1-1195 Len: 1267 Check: 4045 Weight: 1.00 Name: BACU010463/1-1126 Len: 1267 Check: 6160 Weight: 1.00 // 1 50 ENSTTRP00000006487/1-1062 --------MA LQVELIPTGE IIRVVHPHRP CKL------- ---------- ENSBTAP00000029554/1-1063 --------MA LQVELIPTGE IIRVVHPHRP CKL------- ---------- ENSP00000352834/1-1063 --------MA LQVELVPTGE IIRVVHPHRP CKL------- ---------- bmy_00168T0/1-1195 --------MA LQVELIPTGE IIRVVHPHRP CKLVSWDALG WEEGWQCLAR BACU010463/1-1126 ARWLSTDGMA LQVELIPTGE IIRVVHPHRP CKL------- ---------- 51 100 ENSTTRP00000006487/1-1062 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000029554/1-1063 ---------- ---------- ---------- ---------- ---------- ENSP00000352834/1-1063 ---------- ---------- ---------- ---------- ---------- bmy_00168T0/1-1195 AQQLPLKQTP WERAGEGPPS PSTEGGGGAR GVPRLRGSRR GRNGGRVGPS BACU010463/1-1126 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000006487/1-1062 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000029554/1-1063 ---------- ---------- ---------- ---------- ---------- ENSP00000352834/1-1063 ---------- ---------- ---------- ---------- ---------- bmy_00168T0/1-1195 LVTPPPPPPP PSPEARARAA EQGARPTGQD ALPSVEPSDP FEECAVGPAV BACU010463/1-1126 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000006487/1-1062 ---------- ---------- ----ALGSDG VRVTMESALT ARDRVGVQDF ENSBTAP00000029554/1-1063 ---------- ---------- ----ALGSDG VRVTMESALT ARDRVGVQDF ENSP00000352834/1-1063 ---------- ---------- ----ALGSDG VRVTMESALT ARDRVGVQDF bmy_00168T0/1-1195 YAGGEKWPSL TLLPLTLSRG PSLQALGSDG VRVTMESALT ARDRVGVQDF BACU010463/1-1126 ---------- ---------- ----ALGSDG VRVTMESALT ARDRVGVQDF 201 250 ENSTTRP00000006487/1-1062 VLLENFTSEA AFIENLRRRF RENLIYTYIG PVLVSVNPYR DLQIYSRQHM ENSBTAP00000029554/1-1063 VLLENFTSEA AFIENLRRRF RENLIYTYIG PVLVSVNPYR DLQIYSRQHM ENSP00000352834/1-1063 VLLENFTSEA AFIENLRRRF RENLIYTYIG PVLVSVNPYR DLQIYSRQHM bmy_00168T0/1-1195 VLLENFTSEA AFIENLRRRF RENLIYTYIG PVLVSVNPYR DLQIYSRQHM BACU010463/1-1126 VLLENFTSEA AFIENLRRRF RENLIYTYIG PVLVSVNPYR DLQIYSRQHM 251 300 ENSTTRP00000006487/1-1062 ERYRGVSFYE VPPHLFAVAD TAYRALRTER RDQAVMISGE SGAGKTEATK ENSBTAP00000029554/1-1063 ERYRGVSFYE VPPHLFAVAD TVYRALRTER RDQAVMISGE SGAGKTEATK ENSP00000352834/1-1063 ERYRGVSFYE VPPHLFAVAD TVYRALRTER RDQAVMISGE SGAGKTEATK bmy_00168T0/1-1195 ERYRGVSFYE VPPHLFAVAD TAYRALRTER RDQAVMISGE SGAGKTEATK BACU010463/1-1126 ERYRGVSFYE VPPHLFAVAD TAYRALRTER RDQAVMISGE SGAGKTEATK 301 350 ENSTTRP00000006487/1-1062 RLLQFYAETC PAPERGGAVR DRLLQSNPVL EAFGNAKTLR NDNSSRFGKY ENSBTAP00000029554/1-1063 RLLQFYAETC PAPERGGAVR DRLLQSNPVL EAFGNAKTLR NDNSSRFGKY ENSP00000352834/1-1063 RLLQFYAETC PAPERGGAVR DRLLQSNPVL EAFGNAKTLR NDNSSRFGKY bmy_00168T0/1-1195 RLLQFYAETC PAPERGGAVR DRLLQSNPVL EAFGNAKTLR NDNSSRFGKY BACU010463/1-1126 RLLQFYAETC PAPERGGAVR DRLLQSNPVL EAFGNAKTLR NDNSSRFGKY 351 400 ENSTTRP00000006487/1-1062 MDVQFDFKGA PVGGHILSYL LEKSRVVHQN HGERNFHIFY QLLEGGEEET ENSBTAP00000029554/1-1063 MDVQFDFKGA PVGGHILSYL LEKSRVVHQN HGERNFHIFY QLLEGGEEET ENSP00000352834/1-1063 MDVQFDFKGA PVGGHILSYL LEKSRVVHQN HGERNFHIFY QLLEGGEEET bmy_00168T0/1-1195 MDVQFDFKGA PVGGHILSYL LEKSRVVHQN HGERNFHIFY QLLEGGEEET BACU010463/1-1126 MDVQFDFKGA PVGGHILSYL LEKSRVVHQN HGERNFHVFY QLLEGGEEET 401 450 ENSTTRP00000006487/1-1062 L-RLGLERNP QSYLYLVKXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000029554/1-1063 LRRLGLERNP QSYLYLVKGQ CAKVSSINDK SDWKVVRKAL TVIDFTEDEV ENSP00000352834/1-1063 LRRLGLERNP QSYLYLVKGQ CAKVSSINDK SDWKVVRKAL TVIDFTEDEV bmy_00168T0/1-1195 LRRLGLERNP QSYLYLVKGQ CAKVSSINDK NDWKVVRKAL TVIDFTEDEV BACU010463/1-1126 LRRLGLERNP QSYLYLVKGQ CAKVSSINDK NDWKVVRKAL TVIDFTEDEV 451 500 ENSTTRP00000006487/1-1062 XDLLSIVASV LHLGNIHFAA DEESNAQVTT ENQLKYLTRL LGVEGSTLRE ENSBTAP00000029554/1-1063 EDLLSIVASV LHLGNTHFAA DEESNAQVTT ENQLKYLTRL LGVEGSTLRE ENSP00000352834/1-1063 EDLLSIVASV LHLGNIHFAA NEESNAQVTT ENQLKYLTRL LSVEGSTLRE bmy_00168T0/1-1195 EDLLSIVASV LHLGNIHFAA DEESNAQVTT ENQLKYLTRL LGVEGSTLRE BACU010463/1-1126 EDLLSIVASV LHLGNIHFAA DEESNAQVTT ENQLKYLTRL LGVEGSTLRE 501 550 ENSTTRP00000006487/1-1062 ALTHRKIIAK GEELLSPLNL EQAAYARDAL AKAVYSRTFT WLVAKINRSL ENSBTAP00000029554/1-1063 ALTHRKIIAK GEELLSPLNL EQAAYARDAL AKAVYSRTFT WLVAKINRSL ENSP00000352834/1-1063 ALTHRKIIAK GEELLSPLNL EQAAYARDAL AKAVYSRTFT WLVGKINRSL bmy_00168T0/1-1195 ALTHRKIIAK GEELLSPLNL EQAAYVRDAL AKAVYSRTFT WLVTKINRSL BACU010463/1-1126 ALTHRKIIAK GEELLSPLNL EQAAYARDAL AKAVYSRTFT WLVTKINRSL 551 600 ENSTTRP00000006487/1-1062 ASKDADSPSW RSTTVLGLLD IYGFEVFQNN SFEQFCINYC NEKLQQLFIE ENSBTAP00000029554/1-1063 ASKDAESPSW RSTTVLGLLD IYGFEVFQHN SFEQFCINYC NEKLQQLFIE ENSP00000352834/1-1063 ASKDVESPSW RSTTVLGLLD IYGFEVFQHN SFEQFCINYC NEKLQQLFIE bmy_00168T0/1-1195 ASKDAESPSW RSTTVLGLLD IYGFEVFQNN SFEQFCINYC NEKLQQLFIE BACU010463/1-1126 ASKDAESPSW RSTTVLGLLD IYGFEVFQNN SFEQFCINYC NEKLQQLFIE 601 650 ENSTTRP00000006487/1-1062 LTLKSEQEEY EAEGIAWEPV QYFNNKIICD LVEEKFKGII SILDEECLRP ENSBTAP00000029554/1-1063 LTLKSEQEEY EAEGIAWEPV QYFNNKIICD LVEEKFKGII SILDEECLRP ENSP00000352834/1-1063 LTLKSEQEEY EAEGIAWEPV QYFNNKIICD LVEEKFKGII SILDEECLRP bmy_00168T0/1-1195 LTLKSEQEEY EAEGIAWEPV QYFNNKIICD LVEEKFKGII SILDEECLRP BACU010463/1-1126 LTLKSEQEEY EAEGIAWEPV QYFNNKIICD LVEEKFKGII SILDEECLRP 651 700 ENSTTRP00000006487/1-1062 GEATDLTFLE KLEDTVKHHP HFLTHKLADQ RTRKSLGRGE FRLLHYAGEV ENSBTAP00000029554/1-1063 GEATDLTFLE KLEDTIKQHP HFLTHKLADQ RTRKSLDRGE FRLLHYAGEV ENSP00000352834/1-1063 GEATDLTFLE KLEDTVKHHP HFLTHKLADQ RTRKSLGRGE FRLLHYAGEV bmy_00168T0/1-1195 GEATDLTFLE KLEDTVKHHP HFLTHKLADQ RTRKSLGRGE FRLLHYAGEV BACU010463/1-1126 GEATDLTFLE KLEDTVKHHP HFLTHKLADQ RTRKSLGRGE FRLLHYAGEV 701 750 ENSTTRP00000006487/1-1062 TYNVTGFLDK NNDLLFRNLK EAMCSSENPI MSQCFDRSEL SDKKRPETVA ENSBTAP00000029554/1-1063 TYNVTGFLDK NNDLLFRNLK ETMCSSENPI LGQCFDRSEL SDKKRPETVA ENSP00000352834/1-1063 TYSVTGFLDK NNDLLFRNLK ETMCSSKNPI MSQCFDRSEL SDKKRPETVA bmy_00168T0/1-1195 TYNVTGFLDK NNDLLFRNLK ETMCSSENPI MSQCFDRSEL SDKKRPETVA BACU010463/1-1126 TYNVTGFLDK NNDLLFRNLK ETMCSSENPI MSQCFDRSEL SDKKRPETVA 751 800 ENSTTRP00000006487/1-1062 TQFKMSLLQL VEILKSKEPA YVRCIKPNDA KQPXXXXXXX XXXXXXXXXX ENSBTAP00000029554/1-1063 TQFKMSLLEL VEILKSKEPA YVRCIKPNDS KQPGRFDEVL IRHQVKYLGL ENSP00000352834/1-1063 TQFKMSLLQL VEILQSKEPA YVRCIKPNDA KQPGRFDEVL IRHQVKYLGL bmy_00168T0/1-1195 TQFKMSLLQL VEILKSKEPA YVRCIKPNDA KQPGRFDEVL IRHQVKYLGL BACU010463/1-1126 TQFKMSLLQL VEILKSKEPA YVRCIKPNDA KQPGRFDEVL IRHQVKYLGL 801 850 ENSTTRP00000006487/1-1062 XXXXXXXXXX XXXXXXXXXX XXXYKSLCPE TWPIWAGRPQ DGVAVLVRHL ENSBTAP00000029554/1-1063 MENLRVRRAG FAYRRKYEAF LQRYKSLCPE TWPTWTGRPQ DGVTVLVRHL ENSP00000352834/1-1063 LENLRVRRAG FAYRRKYEAF LQRYKSLCPE TWPTWAGRPQ DGVAVLVRHL bmy_00168T0/1-1195 MENLRVRRAG FAYRRKYEAF LQRYKSLCPE TWPIWAGRPQ DGVAVLVRYL BACU010463/1-1126 MENLRVRRAG FAYRRKYEAF LQRYKSLCPE TWPIWAGRPQ DGVAVLVRYL 851 900 ENSTTRP00000006487/1-1062 GYKPEEYKMG RTKIFIRFPK TLFATEDALE VRRQSLATKI QATWRGFHWR ENSBTAP00000029554/1-1063 GYKPEEYKMG RTKIFIRFPK TLFATEDALE IRRQSLATKI QATWRGFHCR ENSP00000352834/1-1063 GYKPEEYKMG RTKIFIRFPK TLFATEDALE VRRQSLATKI QAAWRGFHWR bmy_00168T0/1-1195 GYKPEEYKMG RTKIFIRFPK TLFATEDALE VRRQSLATKI QATWRGFHWR BACU010463/1-1126 GYKPEEYKMG RTKIFIRFPK TLFATEDALE VRRQSLATKI QATWRGFHWR 901 950 ENSTTRP00000006487/1-1062 QKFLRVKRSA ICIQSWWRGT LGRRKAAKRK WAAQTIRRXX XXXXXXXXXX ENSBTAP00000029554/1-1063 QKFLRVKRSA ICIQSWWRGT LGRRKAAKRK WAAQTIRRLI QGFILRHAPR ENSP00000352834/1-1063 QKFLRVKRSA ICIQSWWRGT LGRRKAAKRK WAAQTIRRLI RGFVLRHAPR bmy_00168T0/1-1195 QKFLRVKRSA ICIQSWWRGT LGRRKAAKRK WAAQTIRRLI RGFILRHAPR BACU010463/1-1126 QKFLRVKRSA ICIQSWWRGT LGRRKAAKRK WAAQTIRRLI RGFILRHAPR 951 1000 ENSTTRP00000006487/1-1062 XXXXXXILDH VRTSFLLNLR RQLPRNILDT SWPTPPPALR EASELLRELC ENSBTAP00000029554/1-1063 CPENAFFVDH VRTSFLLNLR RQLPRNILDT SWPTPPPALR EASELLRELC ENSP00000352834/1-1063 CPENAFFLDH VRTSFLLNLR RQLPQNVLDT SWPTPPPALR EASELLRELC bmy_00168T0/1-1195 CPENAFFLDH VRTSFLLNLR RQLPRNILDT SWPTPPPALR EASELLRELC BACU010463/1-1126 CPENAFFLDH VRTSFLLNLR RQLPRNILDT SWPTPPPALR EVSELLRELC 1001 1050 ENSTTRP00000006487/1-1062 RKNMVWKYCR SISPEWKQQL QQKAVASEIF KGKKDNYPQS VPRLFISTRL ENSBTAP00000029554/1-1063 RKNMVWKYCR SISPEWKQQL QQKAVASEIF KGKKDNYPQS VPRLFISTRL ENSP00000352834/1-1063 IKNMVWKYCR SISPEWKQQL QQKAVASEIF KGKKDNYPQS VPRLFISTRL bmy_00168T0/1-1195 RKNMVWKYCR SISPEWKQQL QQKAVASEIF KGKKDNYPQS VPRLFISTRL BACU010463/1-1126 RKNMVWKYCR SISPEWKQQL QQKAVASEIF KGKKDNYPQS VPRLFISTRL 1051 1100 ENSTTRP00000006487/1-1062 GADEISPKVL QALGSEPIQY AVPVVKYDRK GYKPRSRQLL LTPNAVVIVE ENSBTAP00000029554/1-1063 GADEINPRVL QALGSEPIQY AVPVVKYDRK GYKPRSRQLL LTPNAVVIVE ENSP00000352834/1-1063 GTDEISPRVL QALGSEPIQY AVPVVKYDRK GYKPRSRQLL LTPNAVVIVE bmy_00168T0/1-1195 GADEISPKVL QALGSEPIQY AVPVVKYDRK GYKPRSRQLL LTPNAVVIVE BACU010463/1-1126 GADEISPKVL QALGSEPIQY AVPVVKYDRK GYKPRSRQLL LTPNAVVIVE 1101 1150 ENSTTRP00000006487/1-1062 DAKVKQRIEY ANLTGISVSS LSDSLFVLHV QREDNKQKGD VVLQSDHVIE ENSBTAP00000029554/1-1063 DAKVKQRIEY TNLTGISVSS LSDSLFVLHV QREDNKQKGD VVLQSDHVIE ENSP00000352834/1-1063 DAKVKQRIDY ANLTGISVSS LSDSLFVLHV QRADNKQKGD VVLQSDHVIE bmy_00168T0/1-1195 DAKVKQRIEY ANLTGISVSS LSDSLFVLH- --------GD VVLQSDHVIE BACU010463/1-1126 DAKVKQRIEY ANLTGISVSS LSDSLFVLHV QREDNKQKGD VVLQSDHVIE 1151 1200 ENSTTRP00000006487/1-1062 TLTKTALSAD RVNNININHG SITFAGGPGR DGIIDFTTGS ELLVTKAKNG ENSBTAP00000029554/1-1063 TLTKTALSAD RVNNININQG SITFAGGPGR DGIIDFTPGS ELLITKAKNG ENSP00000352834/1-1063 TLTKTALSAN RVNSININQG SITFAGGPGR DGTIDFTPGS ELLITKAKNG bmy_00168T0/1-1195 TLTKMALSAD RVNSININQG SITFAGGPGR DGIIDFTTGS ELLITKAKNG BACU010463/1-1126 TLTKTALSAD RVNSININQG SITFAGGPGR DGIIDFTTGS ELLITKAKNG 1201 1250 ENSTTRP00000006487/1-1062 HLAVVAPRLN SR-------- ---------- ---------- ---------- ENSBTAP00000029554/1-1063 HLAVVAPRLN SR-------- ---------- ---------- ---------- ENSP00000352834/1-1063 HLAVVAPRLN SR-------- ---------- ---------- ---------- bmy_00168T0/1-1195 HLAVVAPRLN SR-------- ---------- ---------- ---------- BACU010463/1-1126 HLAVVFSSVM SMWGLRGTAS DPHRQSLVRS CLKVQSSWGN EEQACLFPKG 1251 1300 ENSTTRP00000006487/1-1062 ---------- ------- ENSBTAP00000029554/1-1063 ---------- ------- ENSP00000352834/1-1063 ---------- ------- bmy_00168T0/1-1195 ---------- ------- BACU010463/1-1126 PEFTLGWLLL LACGDML