KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:37:21 2014 Check: 00 .. Name: ENSP00000307241/1-359 Len: 402 Check: 8476 Weight: 1.00 Name: ENSBTAP00000028958/1-359 Len: 402 Check: 8946 Weight: 1.00 Name: ENSTTRP00000014592/1-358 Len: 402 Check: 8125 Weight: 1.00 Name: bmy_14178T0/1-392 Len: 402 Check: 1380 Weight: 1.00 Name: BACU015076/1-359 Len: 402 Check: 608 Weight: 1.00 // 1 50 ENSP00000307241/1-359 ---------- ---------- ---------- ---------- ---MAAVSGL ENSBTAP00000028958/1-359 ---------- ---------- ---------- ---------- ---MAVVAVL ENSTTRP00000014592/1-358 ---------- ---------- ---------- ---------- ---MAVVASL bmy_14178T0/1-392 RPGGRGTQTP CPAIGPRRQG KWGLTSPRPC CVVVRRRLED TVKMAVVTGL BACU015076/1-359 ---------- ---------- ---------- ---------- ---MAVVAGL 51 100 ENSP00000307241/1-359 VRRPLREVSG LLKRRFHWTA PAALQVTVRD AINQGMDEEL ERDEKVFLLG ENSBTAP00000028958/1-359 VRKPLEQVSG LLRRRFHRTA PAALQVTVRE AINQGMDEEL ERDEKVFLLG ENSTTRP00000014592/1-358 TRRPL-QVSG LLRRRFHRTA PAALQVTVRE AINQGMDEEL ERDEKVFLLG bmy_14178T0/1-392 TRRPLEQVSG LLRRRFHRTA PAALQVTVRE AINQGMDEEL ERDEKVFLLG BACU015076/1-359 TRRPLEQVSG LLRRRFHRTA PAALQVTVRE AINQGMDEEL ERDEKVFLLG 101 150 ENSP00000307241/1-359 EEVAQYDGAY KVSRGLWKKY GDKRIIDTPI SEMGFAGIAV GAAMAGLRPI ENSBTAP00000028958/1-359 EEVAQYDGAY KVSRGLWKKY GDKRIIDTPI SEMGFAGIAV GAAMAGLRPI ENSTTRP00000014592/1-358 EEVAQYDGAY KVSRGLWKKY GDKRIIDTPI SEMGFAGIAV GAAMAGLRPI bmy_14178T0/1-392 EEVAQYDGAY KVSRGLWKKY GDKRIIDTPI SEMGFAGIAV GAAMAGLRPI BACU015076/1-359 EEVAQYDGAY KVSRGLWKKY GDKRIIDTPI SEMGFAGIAV GAAMAGLRPI 151 200 ENSP00000307241/1-359 CEFMTFNFSM QAIDQVINSA AKTYYMSGGL QPVPIVFRGP NGASAGVAAQ ENSBTAP00000028958/1-359 CEFMTFNFSM QAIDQVINSA AKTYYMSGGL QSVPIVFRGP NGASAGVAAQ ENSTTRP00000014592/1-358 CEFMTFNFSM QAIDQVINSA AKTYYMSAGF QSVPIVFRGP NGASAGVAAQ bmy_14178T0/1-392 CEFMTFNFSM QAIDQVINSA AKTYYMSGGS QPVPIVFRGP NGASAGVAAQ BACU015076/1-359 CEFMTFNFSM QAIDQVINSA AKTYYMSGGS QPVPIVFRGP NGASAGVAAQ 201 250 ENSP00000307241/1-359 HSQCFAAWYG HCPGLKVVSP WNSEDAKGLI KSAIRDNNPV VVLENELMYG ENSBTAP00000028958/1-359 HSQCFAAWYG HCPGLKVVSP WSSEDAKGLI KSAIRDNNPV VVLENELMYG ENSTTRP00000014592/1-358 HSQCFAAWYG HCPGLKVVSP WSSEDAKGLI KSAIRDNNPV VVLENELMYG bmy_14178T0/1-392 HSQCFAAWYG HCPGLKVVSP WSSEDAKGLI KSAIRDNNPV VVLENELMYG BACU015076/1-359 HSQCFAAWYG HCPGLKVVSP WSSEDAKGLI KSAIRDNNPV VVLENELMYG 251 300 ENSP00000307241/1-359 VPFEFPPEAQ SKDFLIPIGK AKIERQGTHI TVVSHSRPVG HCLEAAAVLS ENSBTAP00000028958/1-359 VPFELPSEAQ SKDFLIPIGK AKIERQGTHV TIVAHSRPVG HCLEAATVLS ENSTTRP00000014592/1-358 VPFELPPEAQ SKDFLIPIGK AKIERQGTHV TIVSHSRPVS HCLEAATVLS bmy_14178T0/1-392 VPFELPPEAQ SKDFLIPIGK AKIERQGTHV TIVSHSRPVS HCLEAAT--- BACU015076/1-359 VPFELPPEAQ SKDFLIPIGK AKIERQGTNV TIVSHSRPVS HCLEAATVLS 301 350 ENSP00000307241/1-359 KEGVECEVIN MRTIRPMDME TIEASVMKTN HLVTVEGGWP QFGVGAEICA ENSBTAP00000028958/1-359 KEGIECEVIN LRTIRPMDIE TIEGSVMKTN HLVTVEGGWP QFGVGAEICA ENSTTRP00000014592/1-358 KEGIECEVIN MRTIRPMDIE TIEASVMKTN HLVTVEGGWP QFGVGAEICA bmy_14178T0/1-392 -------VIN MRTIRPMDVE TIEASVMKTN HLVTVEGGWP QFGVGAEICA BACU015076/1-359 KEGIECEVIN MRTIRPMDIE TIEASVMKTN HLVTVEGGWP QFGVGAEICA 351 400 ENSP00000307241/1-359 RIMEGPAFNF LDAPAVRVTG ADVPMPYAKI LEDNSIPQVK DIIFAIKKTL ENSBTAP00000028958/1-359 RIMEGPAFNF LDAPAVRVTG ADVPMPYAKI LEDNSVPQVK DIIFAIKKTL ENSTTRP00000014592/1-358 RIMEGPAFNF LDAPVVRVTG ADVPMPYAKV LEDNSVPQVK DIIFAIKKAL bmy_14178T0/1-392 RIMEGPAFNF LDAPVVRVTG ADVPMPYAKV LEDNSVPQVK DIIFAIKKTL BACU015076/1-359 RIMEGPAFNF LDAPVVRVTG ADVPMPYAKV LEDNSVPQVK DIIFAIKKTL 401 450 ENSP00000307241/1-359 NI ENSBTAP00000028958/1-359 NI ENSTTRP00000014592/1-358 NM bmy_14178T0/1-392 NI BACU015076/1-359 NI