KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:36:41 2014 Check: 00 .. Name: ENSTTRP00000010491/1-1118 Len: 1198 Check: 4895 Weight: 1.00 Name: bmy_17453T0/1-1176 Len: 1198 Check: 4613 Weight: 1.00 Name: BACU005401/1-1143 Len: 1198 Check: 5421 Weight: 1.00 Name: ENSP00000301764/1-1140 Len: 1198 Check: 5262 Weight: 1.00 Name: ENSBTAP00000028740/1-1140 Len: 1198 Check: 4915 Weight: 1.00 // 1 50 ENSTTRP00000010491/1-1118 ---------- ---------- ---------- ---------- ---------- bmy_17453T0/1-1176 PAALACNVSL GRRQGQWSSP CAGGGSLSVC SCPSIFFVSP ESRWAAPGLD BACU005401/1-1143 ---------- ---------- ---------- ---------- ---------- ENSP00000301764/1-1140 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028740/1-1140 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000010491/1-1118 ---------- ---------- -HFTSAEDLN LLIAKNTRLE IYVVTAEGLR bmy_17453T0/1-1176 MSYNYVVTAQ KPTAVNGCVT GHFTSAEDLN LLIAKNTRLE IYVVTAEGLR BACU005401/1-1143 MSYNYVVTAQ KPTAVNGCVT GHFTSAEDLN LLIAKNTRLE IYVVTAEGLR ENSP00000301764/1-1140 MSYNYVVTAQ KPTAVNGCVT GHFTSAEDLN LLIAKNTRLE IYVVTAEGLR ENSBTAP00000028740/1-1140 MSYNYVVTAQ KPTAVNGCVT GHFTSAEDLN LLIAKNTRLE IYVVTAEGLR 101 150 ENSTTRP00000010491/1-1118 PVKEVGMYGK IAVMELFRPK GESKDLLFIL TAKYNACILE YKQSGESIDI bmy_17453T0/1-1176 PVKEVGMYGK IAVMELFRPK GESKDLLFIL TAKYNACILE YKQSGESIDI BACU005401/1-1143 PVKEVGMYGK IAVMELFRPK GESKDLLFIL TAKYNACILE YKQSGESIDI ENSP00000301764/1-1140 PVKEVGMYGK IAVMELFRPK GESKDLLFIL TAKYNACILE YKQSGESIDI ENSBTAP00000028740/1-1140 PVKEVGMYGK IAVMELFRPK GESKDLLFIL TAKYNACILE YKQSGESIDI 151 200 ENSTTRP00000010491/1-1118 ITRAHGNVQD RIGRPSETGI IGIIDPECRM IGLRLYDGLF KVIPLDRDNK bmy_17453T0/1-1176 ITRAHGNVQD RIGRPSETGI IGIIDPECRM IGLRLYDGLF KVIPLDRDNK BACU005401/1-1143 ITRAHGNVQD RIGRPSETGI IGIIDPECRM IGLRLYDGLF KVIPLDRDNK ENSP00000301764/1-1140 ITRAHGNVQD RIGRPSETGI IGIIDPECRM IGLRLYDGLF KVIPLDRDNK ENSBTAP00000028740/1-1140 ITRAHGNVQD RIGRPSETGI IGIIDPECRM IGLRLYDGLF KVIPLDRDNK 201 250 ENSTTRP00000010491/1-1118 ELKAFNIRLE ELHVIDVKFL YGCQAPTICF VYQXXXXXXX XXXXXXXXXX bmy_17453T0/1-1176 ELKAFNIRLE ELHVIDVKFL YGCQAPTICF VYQDPQGRHV KTYEVSLREK BACU005401/1-1143 ELKAFNIRLE ELHVIDVKFL YGCQAPTICF VYQDPQGRHV KTYEVSLREK ENSP00000301764/1-1140 ELKAFNIRLE ELHVIDVKFL YGCQAPTICF VYQDPQGRHV KTYEVSLREK ENSBTAP00000028740/1-1140 ELKAFNIRLE ELHVIDVKFL YGCQAPTICF VYQDPQGRHV KTYEVSLREK 251 300 ENSTTRP00000010491/1-1118 XXXXXXXXXX XXXXXXXXXX XXPEPFGGAI IIGQESITYH NGDKYLAIAP bmy_17453T0/1-1176 EFNKGPWKQE NVEAEASMVI AVPEPFGGAI IIGQESITYH NGDKYLAIAP BACU005401/1-1143 EFNKGPWKQE NVEAEASMVI AVPEPFGGAI IIGQESITYH NGDKYLAIAP ENSP00000301764/1-1140 EFNKGPWKQE NVEAEASMVI AVPEPFGGAI IIGQESITYH NGDKYLAIAP ENSBTAP00000028740/1-1140 EFNKGPWKQE NVEAEASMVI AVPEPFGGAI IIGQESITYH NGDKYLAIAP 301 350 ENSTTRP00000010491/1-1118 PIIK----QS TIVCHNRVDP NGSRYLLGDM EGRLFMLLLE KEEQMDGTVT bmy_17453T0/1-1176 PIIKSSNQQS TIVCHNRVDP NGSRYLLGDM EGRLFMLLLE KEEQMDGTVT BACU005401/1-1143 PIIK----QS TIVCHNRVDP NGSRYLLGDM EGRLFMLLLE KEEQMDGTVT ENSP00000301764/1-1140 PIIK----QS TIVCHNRVDP NGSRYLLGDM EGRLFMLLLE KEEQMDGTVT ENSBTAP00000028740/1-1140 PIIK----QS TIVCHNRVDP NGSRYLLGDM EGRLFMLLLE KEEQMDGTVT 351 400 ENSTTRP00000010491/1-1118 LKDLRVELLG EXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_17453T0/1-1176 LKDLRVELLG ETSIAECLTY LDNGVVFVGS RLGDSQLVKL NVDSNEQGSY BACU005401/1-1143 LKDLRVELLG ETSIAECLTY LDNGVVFVGS RLGDSQLVKL NVDSNEQGSY ENSP00000301764/1-1140 LKDLRVELLG ETSIAECLTY LDNGVVFVGS RLGDSQLVKL NVDSNEQGSY ENSBTAP00000028740/1-1140 LKDLRVELLG ETSIAECLTY LDNGVVFVGS RLGDSQLVKL NVDSNEQGSY 401 450 ENSTTRP00000010491/1-1118 XXXXXXXXXX XXXXXXXXXX XXXXXXXXLV TCSGAFKEGS LRIIRNGIGI bmy_17453T0/1-1176 VVAMETFTNL GPIVDMCVVD LERQGQGQLV TCSGAFKEGS LRIIRNGIGI BACU005401/1-1143 VVAMETFTNL GPIVDMCVVD LERQGQGQLV TCSGAFKEGS LRIIRNGIGI ENSP00000301764/1-1140 VVAMETFTNL GPIVDMCVVD LERQGQGQLV TCSGAFKEGS LRIIRNGIGI ENSBTAP00000028740/1-1140 VVAMETFTNL GPIVDMCVVD LERQGQGQLV TCSGAFKEGS LRIIRNGIGI 451 500 ENSTTRP00000010491/1-1118 HEHASIDLPG IKGLWPLRSD PNRETDDTLV LSFVGQTRVL MLNGEEVEET bmy_17453T0/1-1176 HEHASIDLPG IKGLWPLRSD PNRETDDTLV LSFVGQTRVL MLNGEEVEET BACU005401/1-1143 HEHASIDLPG IKGLWPLRSD PNRETDDTLV LSFVGQTRVL MLNGEEVEET ENSP00000301764/1-1140 HEHASIDLPG IKGLWPLRSD PNRETDDTLV LSFVGQTRVL MLNGEEVEET ENSBTAP00000028740/1-1140 HEHASIDLPG IKGLWPLRSD PNRETDDTLV LSFVGQTRVL MLNGEEVEET 501 550 ENSTTRP00000010491/1-1118 ELMGFVDDQQ TFFCGNVAHQ QLIQITSASV RLVSQDPKAL VSECKEPQGK bmy_17453T0/1-1176 ELMGFVDDQQ TFFCGNVAHQ QLIQITSASV RLVSQDPKAL VSEWKEPQGK BACU005401/1-1143 ELMGFVDDQQ TFFCGNVAHQ QLIQITSASV RLVSQDPKAL VSEWKEPQGK ENSP00000301764/1-1140 ELMGFVDDQQ TFFCGNVAHQ QLIQITSASV RLVSQEPKAL VSEWKEPQAK ENSBTAP00000028740/1-1140 ELMGFVDDQQ TFFCGNVAHQ QLIQITSASV RLVSQEPKAL VSEWKEPQGK 551 600 ENSTTRP00000010491/1-1118 NISVISCNSS QVVVAVGRAL YYLQIHPQEL RQISHTEMEH EVACLDITPL bmy_17453T0/1-1176 NISVASCNSS QVVVAVGRAL YYLQIHPQEL RQISHTEMEH EVACLDITPL BACU005401/1-1143 NISVASCNSS QVVVAVGRAL YYLQIHPQEL RQISHTEMEH EVACLDITPL ENSP00000301764/1-1140 NISVASCNSS QVVVAVGRAL YYLQIHPQEL RQISHTEMEH EVACLDITPL ENSBTAP00000028740/1-1140 NISVASCNSS QVVVAVGRAL YYLQIHPQEL RQISHTEMEH EVACLDITPL 601 650 ENSTTRP00000010491/1-1118 GDSSGMSPLC AIGLWTDISA RIAKLPSFEL LHKEMLGGEI IPRSILMTTF bmy_17453T0/1-1176 GDSNGMSPLC AIGLWTDISA RIAKLPSFEL LHKEMLGGEI IPRSILMTTF BACU005401/1-1143 GDSNGMSPLC AIGLWTDISA RIAKLPSFEL LHKEMLGGEI IPRSILMTTF ENSP00000301764/1-1140 GDSNGLSPLC AIGLWTDISA RILKLPSFEL LHKEMLGGEI IPRSILMTTF ENSBTAP00000028740/1-1140 GDSNGMSPLC AIGLWTDISA RIAKLPSFEL LHKEMLGGEI IPRSILMTTF 651 700 ENSTTRP00000010491/1-1118 ESSHYLLCAL GDGALFYFGL NIETGLLSDR KKVTLGTQPT VLRTFRSLST bmy_17453T0/1-1176 ESSHYLLCAL GDGALFYFGL NIETGLLSDR KKVTLGTQPT VLRTFRSLST BACU005401/1-1143 ESSHYLLCAL GDGALFYFGL NIETGLLSDR KKVTLGTQPT VLRTFRSLST ENSP00000301764/1-1140 ESSHYLLCAL GDGALFYFGL NIETGLLSDR KKVTLGTQPT VLRTFRSLST ENSBTAP00000028740/1-1140 ESSHYLLCAL GDGALFYFGL NIETGLLSDR KKVTLGTQPT VLRTFRSLST 701 750 ENSTTRP00000010491/1-1118 TNVFACSDRP TVIYSSNHKL VFSNVNLKEV NYMCPLNSDG YPDSLALANN bmy_17453T0/1-1176 TNVFACSDRP TVIYSSNHKL VFSNVNLKEV NYMCPLNSDG YPDSLALANN BACU005401/1-1143 TNVFACSDRP TVIYSSNHKL VFSNVNLKEV NYMCPLNSDG YPDSLALANN ENSP00000301764/1-1140 TNVFACSDRP TVIYSSNHKL VFSNVNLKEV NYMCPLNSDG YPDSLALANN ENSBTAP00000028740/1-1140 TNVFACSDRP TVIYSSNHKL VFSNVNLKEV NYMCPLNSDG YPDSLALANN 751 800 ENSTTRP00000010491/1-1118 STLTIGTIDE IQKLHIRTVP LYESPR-KIC YQEVSQCFGV LSSRIEVQDT bmy_17453T0/1-1176 STLTIGTIDE IQKLHIRTVP LYESPSTRSA FERGDVC--- ---------- BACU005401/1-1143 STLTIGTIDE IQKLHIRTVP LYESPR-KIC YQEVSQCFGV LSSRIEVQDT ENSP00000301764/1-1140 STLTIGTIDE IQKLHIRTVP LYESPR-KIC YQEVSQCFGV LSSRIEVQDT ENSBTAP00000028740/1-1140 STLTIGTIDE IQKLHIRTVP LYESPR-KIC YQEVSQCFGV LSSRIEVQDT 801 850 ENSTTRP00000010491/1-1118 SGGTTALRPS ASTQXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXNLLIID bmy_17453T0/1-1176 ---------S LCSQALSSSV SSSKLFSSST APHETSFGEE VEVHNLLIID BACU005401/1-1143 SGGTTALRPS ASTQALSSSV SSSKLFSSST APHETSFGEE VEVHNLLIID ENSP00000301764/1-1140 SGGTTALRPS ASTQALSSSV SSSKLFSSST APHETSFGEE VEVHNLLIID ENSBTAP00000028740/1-1140 SGGTTALRPS ASTQALSSSV SSSKLFSSST APHETSFGEE VEVHNLLIID 851 900 ENSTTRP00000010491/1-1118 QHTFEVLHAH QFLQNEYALS LVSCRLGKDP NTYFIVGTAM VYPEEAEPKQ bmy_17453T0/1-1176 QHTFEVLHAH QFLQNEYALS LVSCRLGKDP NTYFIVGTAM VYPEEAEPKQ BACU005401/1-1143 QHTFEVLHAH QFLQNEYALS LVSCRLGKDP NTYFIVGTAM VYPEEAEPKQ ENSP00000301764/1-1140 QHTFEVLHAH QFLQNEYALS LVSCKLGKDP NTYFIVGTAM VYPEEAEPKQ ENSBTAP00000028740/1-1140 QHTFEVLHAH QFLQNEYALS LVSCKLGKDP NTYFIVGTAM VYPEEAEPKQ 901 950 ENSTTRP00000010491/1-1118 GRIVVFQYSD GKLQTVAEKE VKGAVYSMVE FNGKLLASIN STVRLYEWTT bmy_17453T0/1-1176 GRIVVFQYSD GKLQTVAEKE VKGAVYSMVE FNGKLLASIN STVRLYEWTT BACU005401/1-1143 GRIVVFQYSD GKLQTVAEKE VKGAVYSMVE FNGKLLASIN STVRLYEWTT ENSP00000301764/1-1140 GRIVVFQYSD GKLQTVAEKE VKGAVYSMVE FNGKLLASIN STVRLYEWTT ENSBTAP00000028740/1-1140 GRIVVFQYSD GKLQTVAEKE VKGAVYSMVE FNGKLLASIN STVRLYEWTT 951 1000 ENSTTRP00000010491/1-1118 EKELRTECNH YNNIMALYLK TKGDFILVGD LMRSVLLLAY KPMEGNFEEI bmy_17453T0/1-1176 EKELRTECNH YNNIMALYLK TKGDFILVGD LMRSVLLLAY KPMEGNFEEI BACU005401/1-1143 EKELRTECNH YNNIMALYLK TKGDFILVGD LMRSVLLLAY KPMEGNFEEI ENSP00000301764/1-1140 EKELRTECNH YNNIMALYLK TKGDFILVGD LMRSVLLLAY KPMEGNFEEI ENSBTAP00000028740/1-1140 EKELRTECNH YNNIMALYLK TKGDFILVGD LMRSVLLLAY KPMEGNFEEI 1001 1050 ENSTTRP00000010491/1-1118 ARDFNPNWMS AVEILDDDNF LGAENAFNLF VCQKDSAATT DEERQHLQEV bmy_17453T0/1-1176 ARDFNPNWMS AVEILDDDNF LGAENAFNLF VCQKDSAATT DEERQHLQEV BACU005401/1-1143 ARDFNPNWMS AVEILDDDNF LGAENAFNLF VCQKDSAATT DEERQHLQEV ENSP00000301764/1-1140 ARDFNPNWMS AVEILDDDNF LGAENAFNLF VCQKDSAATT DEERQHLQEV ENSBTAP00000028740/1-1140 ARDFNPNWMS AVEILDDDNF LGAENAFNLF VCQKDSAATT DEERQHLQEV 1051 1100 ENSTTRP00000010491/1-1118 GLFHLGEFVN VFCHGSLVMQ NLGETSTPTQ GSVLFGTVNG MIGLVTSLSE bmy_17453T0/1-1176 GLFHLGEFVN VFCHGSLVMQ NLGETSTPTQ GSVLFGTVNG MIGLVTSLSE BACU005401/1-1143 GLFHLGEFVN VFCHGSLVMQ NLGETSTPTQ GSVLFGTVNG MIGLVTSLSE ENSP00000301764/1-1140 GLFHLGEFVN VFCHGSLVMQ NLGETSTPTQ GSVLFGTVNG MIGLVTSLSE ENSBTAP00000028740/1-1140 GLFHLGEFVN VFCHGSLVMQ NLGETSTPTQ GSVLFGTVNG MIGLVTSLSE 1101 1150 ENSTTRP00000010491/1-1118 SWYNLLLDMQ NRLNKVIKSV GKIEHSFW-- -RS-HTERKT EPATGFIDGD bmy_17453T0/1-1176 SWYNLLLDMQ NRLNKVIKSV GKIEHSLYPS QRSFHTERKT EPATGFIDGD BACU005401/1-1143 SWYNLLLDMQ NRLNKVIKSV GKIEHSLYPS QRSFHTERKT EPATGFIDGD ENSP00000301764/1-1140 SWYNLLLDMQ NRLNKVIKSV GKIEHSFW-- -RSFHTERKT EPATGFIDGD ENSBTAP00000028740/1-1140 SWYNLLLDMQ NRLNKVIKSV GKIEHSFW-- -RSFHTERKT EPATGFIDGD 1151 1200 ENSTTRP00000010491/1-1118 LIESFLDISR PKMQEVVANL QFDDGSGMKR EATADDLIKV VEELTRIH bmy_17453T0/1-1176 LIESFLDISR PKMQEVVANL QYDDGSGMKR EATADDLIKV VEELTRIH BACU005401/1-1143 LIESFLDISR PKMQEVVANL QYDDGSGMKR EATADDLIKV VEELTRIH ENSP00000301764/1-1140 LIESFLDISR PKMQEVVANL QYDDGSGMKR EATADDLIKV VEELTRIH ENSBTAP00000028740/1-1140 LIESFLDISR PKMQEVVANL QYDDGSGMKR EATADDLIKV VEELTRIH