KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:36:30 2014 Check: 00 .. Name: ENSBTAP00000028669/1-538 Len: 577 Check: 6475 Weight: 1.00 Name: ENSP00000406286/1-573 Len: 577 Check: 7732 Weight: 1.00 Name: bmy_03370T0/1-541 Len: 577 Check: 544 Weight: 1.00 Name: ENSTTRP00000015328/1-416 Len: 577 Check: 705 Weight: 1.00 // 1 50 ENSBTAP00000028669/1-538 ---------- ---------- ---------- ----MGSPED DLIGIPFPDH ENSP00000406286/1-573 MLQPGPHPPS PQAAAPGEAW PGPSQAPWQS LEEKMGSPED DLIGIPFPDH bmy_03370T0/1-541 ---------- ---------- ---------- ----MGSPED DLIGIPFPDH ENSTTRP00000015328/1-416 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000028669/1-538 SSELLSCLNE QRQLGHLCDL TIRTQGLEYR THRAVLAACS HYFKKLFTEG ENSP00000406286/1-573 SSELLSCLNE QRQLGHLCDL TIRTQGLEYR THRAVLAACS HYFKKLFTEG bmy_03370T0/1-541 SSELLSCLNE QRQLGHLCDL TIRTQGLEYR THRAVLAACS HYFKKLFTEG ENSTTRP00000015328/1-416 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000028669/1-538 GGGALSGAGG GGTAAGGAGA GVCELDFVGP EALGALLEFA YTATLTTSSA ENSP00000406286/1-573 GGGAVMGAGG SGTATGGAGA GVCELDFVGP EALGALLEFA YTATLTTSSA bmy_03370T0/1-541 GGGAVLSAGG GGVAAGGAGA GVCELDFVGP EALGALLEFA YTATLTTSSA ENSTTRP00000015328/1-416 ---------- ---------- ---------- ---------- ---------- 151 200 ENSBTAP00000028669/1-538 NMPAVLQAAR LLEIPCVIAA CMEILQGSGL EAPSPDEDDC ERARQYLEAF ENSP00000406286/1-573 NMPAVLQAAR LLEIPCVIAA CMEILQGSGL EAPSPDEDDC ERARQYLEAF bmy_03370T0/1-541 NMPAVLQAAR LLEIPCVIAA CMEILQGSGL EAPSPDEDDC ERARQYLEAF ENSTTRP00000015328/1-416 -------AAR LLEIPCVIAA M--ILQGSGL EAPSHDEDDC ERARQYLE-F 201 250 ENSBTAP00000028669/1-538 ACTATASASG VPNGDDSPPQ APLPPPPPPP PRPVARRSRK PRKAFLQTKG ENSP00000406286/1-573 A---TATASG VPNGEDSPPQ VPLPPPPPPP PRPVARRSRK PRKAFLQTKG bmy_03370T0/1-541 A-TATASASG VPNGEDSPPQ VPLPPP-PPP PRPVARRSRK PRKAFLQTKG ENSTTRP00000015328/1-416 A-TATASASG VPNGEDSPPQ VPLPPPLPPP PRPVARRSRK PRKAFLQTKG 251 300 ENSBTAP00000028669/1-538 ARANHLVPEV PTVPTHPFTY EEEEE-TGRV ----GSGLGD SYSPPTGAAS ENSP00000406286/1-573 ARANHLVPEV PTVPAHPLTY EEEEV-AGRV GSSGGSGPGD SYSPPTGTAS bmy_03370T0/1-541 ARANHLVPEV PTVPTHPLTY EEEEEAAGRV SGSGGSRLGD SYSPPTGTAS ENSTTRP00000015328/1-416 ARANHLVPEV PTVPTHPLTY EEEEEAAGRV GSSGGSRLGD SYSPPTGTAS 301 350 ENSBTAP00000028669/1-538 PPEGPLSYEA CEGEEEEEEL VYPPPYGLAQ GGGPPLSPEE LGSDEDAIDP ENSP00000406286/1-573 PPEGPQSYEP YEGEEEEEEL VYPPAYGLAQ GGGPPLSPEE LGSDEDAIDP bmy_03370T0/1-541 PHEGPLSYEA YEGEEEEEEL AYPPAYGLAQ GGGPPLSPEE LGSDEDAIDP ENSTTRP00000015328/1-416 PHEGPLSYEA YEGEEEEEEL AYPPAYGLAQ GGGPPLSPEE LGSDEDAIDP 351 400 ENSBTAP00000028669/1-538 DLMAYLSSLH QDTLPPGLDS QDKLVRKRRS QMPQECPVCH KIIHGAGKLP ENSP00000406286/1-573 DLMAYLSSLH QDNLAPGLDS QDKLVRKRRS QMPQECPVCH KIIHGAGKLP bmy_03370T0/1-541 DLMAYLSSLH QDALAPGLDG QDKLVRKRRS QMPQECPVCH KIIHGAGKLP ENSTTRP00000015328/1-416 DLMAYLSSLH QDTLAPGLDG QDKLVRKRRS QMPQECPVCH KIIHGAGKLP 401 450 ENSBTAP00000028669/1-538 RHMRTHTGEK PFACEVCGVR FTRNDKLKIH MRKHTGERPY SCSHCPARFL ENSP00000406286/1-573 RHMRTHTGEK PFACEVCGVR FTRNDKLKIH MRKHTGERPY SCPHCPARFL bmy_03370T0/1-541 RHMRTHTGEK PFACEVCGVR FTRNDKLKIH MRKHTGERPY SCSHCPARFL ENSTTRP00000015328/1-416 RHMRTHTGEK PFACEVCGVR FTRNDKLKIH MRKHTGERPY SCSHCPARFL 451 500 ENSBTAP00000028669/1-538 HSYDLKNHMH LHTGDRPYEC HLCHKAFAKE DHLQRHLKGQ NCLEVRTRRR ENSP00000406286/1-573 HSYDLKNHMH LHTGDRPYEC HLCHKAFAKE DHLQRHLKGQ NCLEVRTRRR bmy_03370T0/1-541 HSYDLKNHMH LHTGDRPYEC HLCHKAFAKE DHLQRHLKGQ NCLEVRTRRR ENSTTRP00000015328/1-416 HSYDLKNHMH LHTGDRPYEC HLCHKAFAKE DHLQRHLKGQ NCLEVRTRRR 501 550 ENSBTAP00000028669/1-538 RKDDAPPHYP PPSAATSSPA GLDLSNGHLD TFRLSLPRFW ETSAPTGPPD ENSP00000406286/1-573 RKDDAPPHYP PPSTAAASPA GLDLSNGHLD TFRLSLARFW EQSAPTGPPV bmy_03370T0/1-541 RKDDAPPHYP PPSAATPTPA GLDLSNGHLD NFRLSLARFW EEPAPTGPPV ENSTTRP00000015328/1-416 RKDDAPPHYP PPSAATPTPA GLDLSNGHLD NFRLSLARFW EEPAPTGPPV 551 600 ENSBTAP00000028669/1-538 STPGPPDDDE EEGAPTTPQA EGAMDTS ENSP00000406286/1-573 STPGPPDDDE EEGAPTTPQA EGAMESS bmy_03370T0/1-541 STPGPPDDDE EEGAPTTPQA EGAMESS ENSTTRP00000015328/1-416 STPGPPDDDE EEGAPTTPQA EGAMESS