KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:35:51 2014 Check: 00 .. Name: ENSTTRP00000010889/1-360 Len: 446 Check: 7396 Weight: 1.00 Name: ENSBTAP00000028371/1-362 Len: 446 Check: 1648 Weight: 1.00 Name: ENSP00000454852/1-360 Len: 446 Check: 8968 Weight: 1.00 Name: bmy_01512T0/1-335 Len: 446 Check: 9434 Weight: 1.00 Name: BACU017886/1-444 Len: 446 Check: 1112 Weight: 1.00 // 1 50 ENSTTRP00000010889/1-360 ---------- ---------- ----MEELSQ ALASSFSVSQ DLNSTAAPHP ENSBTAP00000028371/1-362 ---------- ---------- ----MEELSQ ALAGSFSVSQ DLNSTAAPHP ENSP00000454852/1-360 ---------- ---------- ----MEELSQ ALASSFSVSQ DLNSTAAPHP bmy_01512T0/1-335 ---------- ---------- ----MEELSQ ALASSFSVSQ DLNSTAAPHP BACU017886/1-444 MALESRNPLR PSSSHKAPQG KTGKMEELSQ ALASSFSVSQ DLNSTAAPHP 51 100 ENSTTRP00000010889/1-360 RLSQYKSKYS SLEQSERRRR LLELQKSKRL DYVN------ ---------- ENSBTAP00000028371/1-362 RLSQYKSKYS SLEQSERRRQ LLELQKLKRL DYVN------ ---------- ENSP00000454852/1-360 RLSQYKSKYS SLEQSERRRR LLELQKSKRL DYVN------ ---------- bmy_01512T0/1-335 RLSQYKSKYS SLEQSERRRR LLELQKSKRL DYVN------ ---------- BACU017886/1-444 RLSQYKSKYS SLEQSERRRR LLELQKSKRL DYVNHARRLA EDDWTGTESE 101 150 ENSTTRP00000010889/1-360 ---------- ---------- ---------- ---------- ----HARRLA ENSBTAP00000028371/1-362 ---------- ---------- ---------- ---------- ----HARRLA ENSP00000454852/1-360 ---------- ---------- ---------- ---------- ----HARRLA bmy_01512T0/1-335 ---------- ---------- ---------- ---------- ----HARRLA BACU017886/1-444 EEEEKKDDEE MDIDTGKKLP KLYANQRGNQ CGLWRHRKRL DYVNHARRLA 151 200 ENSTTRP00000010889/1-360 EDDWTGMESE EEEEKKDDEE MDVDTGKKLP KRYANQXXXX XXXXXXXXXX ENSBTAP00000028371/1-362 EDDWTGMESE EEEEKKDDEE MDVDTGKELP KRYANQLMLS EWLIDVPSDL ENSP00000454852/1-360 EDDWTGMES- EEENKKDDEE MDIDTVKKLP KHYANQLMLS EWLIDVPSDL bmy_01512T0/1-335 EDDWTGMETE EEEEKKDDEE MDIDTGKKLP KLYANQLMLS EWLIDVPSDL BACU017886/1-444 EDDWTGTESE EEEEKKDDEE MDIDTGKKLP KLYANQLMLS EWLIDVPPDL 201 250 ENSTTRP00000010889/1-360 XQEWIVVVCP VGK-AHIVAS RGYTNAYIKS GYGVSSFSSL VSGGNRRKSA ENSBTAP00000028371/1-362 GQEWIVVVCP VGKRSLIVAS QGLTSAYTKS GYCVNTFPSL LPGGNRRNST ENSP00000454852/1-360 GQEWIVVVCP VGKRALIVAS RGSTSAYTKS GYCVNRFSSL LPGGNRRNS- bmy_01512T0/1-335 GQEWIVVVCP VGKRALIVAA RGSTSAYTKS GYCVNRFSSL LPGGSRRNSA BACU017886/1-444 GQEWIVVVCP VGKRALIVAA RGSTSAYTKS GYCVNRFSSL LPGGNRRNSA 251 300 ENSTTRP00000010889/1-360 TTKDYTILDC IYSEVNQTYY VLDVMCWRGH PFYDCQTDFR FYWMHSKLP- ENSBTAP00000028371/1-362 TEKDYTILDC IYSEVNQTYY VLDVMCWRGH PFYDCQTDFR FYWLHSKLPE ENSP00000454852/1-360 TAKDYTILDC IYNEVNQTYY VLDVMCWRGH PFYDCQTDFR FYWMHSKLPE bmy_01512T0/1-335 TTKDYTILDC IYSEVNQTYY VLDVMCWRGH PFYDCQ---- ---------- BACU017886/1-444 TTKDYTILDC IYSEVNQTYY VLDVMCWRGH PFYDCQTDFR FYWMHSKLP- 301 350 ENSTTRP00000010889/1-360 EEGLGEKTKL NPFKFVGLKN FPCTPESLCK VLSMDFPFEV DGLLFYHKQT ENSBTAP00000028371/1-362 EEGLGEKTKR NPFKFVGLKN FPCTPESLCK VLSMDFPFEV DGLLFYHKQT ENSP00000454852/1-360 EEGLGEKTKL NPFKFVGLKN FPCTPESLCD VLSMDFPFEV DGLLFYHKQT bmy_01512T0/1-335 ---------- --FKFVGLKN FPCTPESLCK VLSMDFPFEV DGLLFYHKQT BACU017886/1-444 EEGLGEKTKL NPFKFVGLKN FPCTPESLCK VLSMDFPFEV DGLLFYHKQT 351 400 ENSTTRP00000010889/1-360 HYSPGSTPLV GWLRPYMVSD VLGVAVPAGP LTAKPEYAGY QLQQIIEHKR ENSBTAP00000028371/1-362 HYSPGSTPLV GWLRPYMVSD VLGVAVPACP LTTKPEYAGY QLQQIIEHKK ENSP00000454852/1-360 HYSPGSTPLV GWLRPYMVSD VLGVAVPAGP LTTKPDYAGH QLQQIMEHKK bmy_01512T0/1-335 HYSPGSTPLV GWLRPYMVSD VLGVAVPAGP LTAKPEYAGY QLQQIIEHKR BACU017886/1-444 HYSPGSTPLV GWLRPYMVSD VLGVAVPAGP LTAKPEYAGY QLQQIIEHKR 401 450 ENSTTRP00000010889/1-360 SQKEGIKKIL THKSSENGRY ELEHLSTPKL KSPPHSPKHP GSLMDN ENSBTAP00000028371/1-362 SKKEGIMGKL TPRASENGHY ELEHLSTPKL KSPPQRPNHP ESLMEN ENSP00000454852/1-360 SQKEGMKEKL THKASENGHY ELEHLSTPKL KGSSHSPDHP GCLMEN bmy_01512T0/1-335 SQKEGIKE-L THKPSENGRY ELEHLSTPKL KSPPHSPKHP GSLMEN BACU017886/1-444 SQKEGIKE-I THKPSENGRY ELEHLSTPKL KSPPHSPKHP GSLMEN