KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:35:13 2014 Check: 00 .. Name: ENSP00000374037/1-631 Len: 692 Check: 8429 Weight: 1.00 Name: ENSTTRP00000004157/1-627 Len: 692 Check: 6715 Weight: 1.00 Name: bmy_14293T0/1-657 Len: 692 Check: 4867 Weight: 1.00 Name: ENSBTAP00000028205/1-634 Len: 692 Check: 9221 Weight: 1.00 // 1 50 ENSP00000374037/1-631 MAAAAGDGTV KPLQSAMKLA NGAIELDTGN RPREAYTEYL RSIHYISQVL ENSTTRP00000004157/1-627 MAAAVGDGAV KPLQCAMKLA NGAIELDTGN RPREAYTEYL RSVHYISQVL bmy_14293T0/1-657 WA-------- ---------- ---------- --QEAYTEYL RSVHYISQVL ENSBTAP00000028205/1-634 MAAAAGDGSV KPLQCAMKLA NGAIELDTGN RPREAYTEYL RSIHYISQVL 51 100 ENSP00000374037/1-631 LEEVETTKEA GETVPPDTSK MLKLAQQCLE RAQSTAAKLG KTRLKPTMPA ENSTTRP00000004157/1-627 LEEVEASKEA GETVTPDTSK MLKLAEQCLE RAQSTAAKLG KTCLRPAMPV bmy_14293T0/1-657 LEEVETSKEA GETVTPDTSK MLKLAEQCLE RAQSTAAKLG KTCLRPAMPV ENSBTAP00000028205/1-634 LEEVEATKEA GETVTSDTSK MLKLAEQCLE RAQSTAAKLG KTCLRPAMPV 101 150 ENSP00000374037/1-631 AAPIPQPAGR HRRVYSDEGG KLSPFLPPEI FQKLQGAESQ SCKKELTPLE ENSTTRP00000004157/1-627 AAPVPSPTSR HRRVYSDEGG KLSPFLPPEI FQKLQAVESQ SSKKELTPLE bmy_14293T0/1-657 AAPVPSPTSR HRRVYSDEGG KLSPFLPPEI FQKLQVVESQ SSKKELTPLE ENSBTAP00000028205/1-634 AAPVPSPASR HRRVYSDEGG KLSPFLPPEI FQKLQVVESQ SSKKELTPLE 151 200 ENSP00000374037/1-631 EASLQNQKLK AAYEARMARL DPSQAMQKTS LTLSLQRQMM ENLVIAKARE ENSTTRP00000004157/1-627 EASLQNQKLK AAYEARMARL DPSQAMQKTS LTLSLQRQMM ENLVIAKARE bmy_14293T0/1-657 EASLQNQKLK AAYEARMARL DPSQAMQKTS LTLSLQRQVM ENLVIANARE ENSBTAP00000028205/1-634 EASLQNQKLK AAYEARMARL DPSQAMQKTS LTLSLQRQMM ENLVIAKARE 201 250 ENSP00000374037/1-631 ETLQRKMEER RLRLQEAANR RFCSQVALTP EEREQRALYA AILEYEQDHD ENSTTRP00000004157/1-627 KTLQ-EMEER RLRLQEAANX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXD bmy_14293T0/1-657 KTLQRKMEER RLRLQEAANR RFCSQVALTP EDREQRALYA AILEYEQDHD ENSBTAP00000028205/1-634 DTLQRKMEER RLRLQEAANK RFCSQVALTP EEREQRAVYA AILEYEQDHD 251 300 ENSP00000374037/1-631 WPKHWKAKLK RNPGDLSLVT SLVSHLLSLP DHPIAQLLRR LQCSVYSALY ENSTTRP00000004157/1-627 -PKRWKAKLK RSPGDLSLVT SLVSHLLSVP DHPISQLLKK LQCAVYRALY bmy_14293T0/1-657 WPKRWKAKLK RSPGDLSLVT SLVSHLLSVP DHPISQLLKK LQCAVYRALY ENSBTAP00000028205/1-634 WPKLWKAKLK RSPGDLSLVT SLVSHLLSVP DHPISQLLKK LQCAVYRALY 301 350 ENSP00000374037/1-631 PAVSRAAAPA PGCCPPTPN- -----PGSRR LRPSQSLHCM LSPPEPSAAP ENSTTRP00000004157/1-627 PIVSRGAASA LGCRSLPPD- -----PGSRR LRPSQSLYCM PSPPEPSPAQ bmy_14293T0/1-657 PIVSRGAASA LGCRSLPPDA DGLLAPGSRR LRPSQSLYCM PSPPEPSPAP ENSBTAP00000028205/1-634 PIVSKGAAP- -GCCSLPPDA DGLLAPGSRR LRPSQSLYCM PSPLEPSPAP 351 400 ENSP00000374037/1-631 RPQDSP---- PTPPLQP--- ------GPVG SPSPLGDTAS GLPDKDSSFE ENSTTRP00000004157/1-627 RPTDGASASA PIPPPHP--- ------GPTG PSSPLADTSS DLPGNDSSFG bmy_14293T0/1-657 RPTDGASASA PIPPPHPGNP DRGADGSPAG PPSPLADTSS DLPGKDSSFG ENSBTAP00000028205/1-634 KPPDGPCAS- ---PPRP--- -----GSPAG PPSP------ QLLGKDSSFE 401 450 ENSP00000374037/1-631 DLEQFLGTSE RQGRGRGVQP EPQ------- --LQQLKTAV EEIHNAVDRL ENSTTRP00000004157/1-627 DLEQFLATPE RRGRGPGEQP EPQ------- --LEQLKGTV QDIHDAIDRL bmy_14293T0/1-657 DLEQYLATPE RRGRGPGGRP EPQPPGVRKE PLLEQLKGTV QDIHDAIDRL ENSBTAP00000028205/1-634 DLEQFLATPE SRGRGPGERP EPQTPGVRKE PVLEQLKGTV QDIHDAIDRL 451 500 ENSP00000374037/1-631 LSLTLLAFEG LNTAASKDRC LACIEEPFFS PLWPLLLALY RSVHRAREAA ENSTTRP00000004157/1-627 LSLTLLAFEG LNTAASKDRC LACIEEPFFS PLWPLLLAVY RSVHRLREAA bmy_14293T0/1-657 LSLTLLAFEG LNTAASKDRC LACIEEPFFS PLWPLLLAVY RSVHRLREAA ENSBTAP00000028205/1-634 LSLTLLAFEG LNTAASKDRC LACIEEPFFS PLWPLLLAIY RNVHRLREAA 501 550 ENSP00000374037/1-631 LSRSMELYRN APPTAIGIPT KLLPQNPEAK GATGYPYCAA AQELGLLVLE ENSTTRP00000004157/1-627 LSRSMELYGN APPAAVGVPT KLLPRDPEAT AGGAYPYCAA AQELGLLVLE bmy_14293T0/1-657 LSRSMELYGN APPAAVGVPT KLLPRDPEAT AAGAYPYCAA AQELGLLVLE ENSBTAP00000028205/1-634 LSRSMELYRN APPAAIGVPT RLLPQDPEAA GAGPYPYCAA AQELGLLVLE 551 600 ENSP00000374037/1-631 SCPQKKLECI VRTLRIICVC AEDYCPTPEA TPQAGPPPIA AAAIGADDLL ENSTTRP00000004157/1-627 SCPQKKLECI VRALRVTCAC AEDYSRAREA AP-AG----- HAAXXXXXXX bmy_14293T0/1-657 SCPQKKLECI VRALRVICAC AEDYYRAREA APQPG----- IAAIGADDLL ENSBTAP00000028205/1-634 SCPQKKLECI VRALRVICAC AEDYYRAREA ALQPG----- IAAIGADDLL 601 650 ENSP00000374037/1-631 PILSFVVLRS GLPQLVSECA ALEEFIHEGY LIGEEGYCLT SLQSALSYVE ENSTTRP00000004157/1-627 XXXXXXXLRS GLPQLVSECA ALEEFIHERY LIGEEGYCLT SLQSALSYVE bmy_14293T0/1-657 PILSFVALRS GLPQLVSECA ALEEFIHERY LIGEEGYCLT SLQSALSCVE ENSBTAP00000028205/1-634 PILSFVALKS GLPQLVSECA ALEEFIHERY LIGEEGYCLT SLQSALSYVE 651 700 ENSP00000374037/1-631 LLPRGGLAK- ---------- ---------- ---------- -- ENSTTRP00000004157/1-627 LLPRRALGK- ---------- ---------- ---------- -- bmy_14293T0/1-657 LLPRRALGKE QRTGWPRTGP EAPAWGGGLA EVGLSPPPDI SP ENSBTAP00000028205/1-634 LLPRRALGK- ---------- ---------- ---------- --