KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:35:07 2014 Check: 00 .. Name: ENSP00000452746/1-416 Len: 447 Check: 8586 Weight: 1.00 Name: ENSBTAP00000028179/1-416 Len: 447 Check: 9661 Weight: 1.00 Name: ENSTTRP00000015176/1-415 Len: 447 Check: 114 Weight: 1.00 Name: bmy_01521T0/1-446 Len: 447 Check: 6491 Weight: 1.00 Name: BACU017876/1-412 Len: 447 Check: 7670 Weight: 1.00 // 1 50 ENSP00000452746/1-416 MMPQLQFKDA FW-------- ------CRDF TAHTGYEVLL QRLLDGRKMC ENSBTAP00000028179/1-416 MMPQLQFKDA FW-------- ------CRDF TAHTGYEVLL QRLLDGRKMC ENSTTRP00000015176/1-415 -MPQLQFKDA FW-------- ------CRDF TAHTGYEVLL QRLLDGRKTC bmy_01521T0/1-446 -MPQLQFKDA FWPGCGPHTS LCPVFQCRDF TAHTGYEVLL QRLLDGRKTC BACU017876/1-412 -MPQLQFKDA FW-------- ------CRDF TAHTGYEVLL QRLLDGRKTC 51 100 ENSP00000452746/1-416 KDMEELLRQR AQAEERYGKE LVQIARKAGG QTEINSLRAS FDSLKQQMEN ENSBTAP00000028179/1-416 KDVEELLRQR AQAEERYGKE LVQIARKAGG QTEINSLRAS FDSLKQQMEN ENSTTRP00000015176/1-415 KDVEELLRQR AQAEERYGKD LVQIARKAGG QTEINSLRAS FDSLKQQMEN bmy_01521T0/1-446 KDVEELLRQR AQAEERYGKD LVQIARKAGG QTEINSLRAS FDSLKQQMEN BACU017876/1-412 KDVEELLRQR AQAEERYGKD LVQIARKAGG QTEINSLRAS FDSLKQQMEN 101 150 ENSP00000452746/1-416 VGSSHIQLAL TLREELRSLE EFRERQKEQR KKYEAVMDRV QKSKLSLYKK ENSBTAP00000028179/1-416 VGSSHIQLAL ALREELRSLE EFRERQKEQR KKYEAVMDRV QKSKLSLHKK ENSTTRP00000015176/1-415 VGSAHIQLAL ALREELRSLE EFRERQKEQR RTYEAIMDRV QKSKLLLHKK bmy_01521T0/1-446 VGSSHIQLAL ALREELRSLE EFRERQKEQR RKYEAIMDRV QKTKLLLHKK BACU017876/1-412 VGSSHIQLAL ALREELRSLE EFRERQKEQR RKYEAIMDRV QKSKLLLHKK 151 200 ENSP00000452746/1-416 AMESKKTYEQ KCRDADDAEQ AFERISANGH QKQVEKSQNK ARQCKDSATE ENSBTAP00000028179/1-416 AMESKKTYEQ KCRDADDAEQ AFERISTNGQ QKQVEKSQNK AKQCKDSAME ENSTTRP00000015176/1-415 AMESKKTYEQ KCRDADDAEQ AFERISTNGQ QKQVEKSQNK AKQCKDSAME bmy_01521T0/1-446 AMESKKTYEQ KCRDADDAEQ AFERISANGQ QKQVEKSQNK AKQCKDSAME BACU017876/1-412 AMESKKTYEQ KCRDADDAEQ AFERISTNGQ QKQVEKSQNK AKQCKDSAME 201 250 ENSP00000452746/1-416 AERVYRQSIA QLEKVRAEWE QEHRTTCEAF QLQEFDRLTI LRNALWVHSN ENSBTAP00000028179/1-416 AERTYRQNIE QLERVRSEWE QEHRATCEAF QLQEFDRLTI LRNSLWVHCN ENSTTRP00000015176/1-415 AERVYRQNIE QLEKVRGEWE QEHRTTCEAF QLQEFDRLTI LRNALWVHCN bmy_01521T0/1-446 AERVYRQNIE QLEKVRGEWE QEHRATCEAF QLQEFDRLTI LRNALWVHCN BACU017876/1-412 AERVYRQNIE QLEKVRGEWE QEHRATCEAF QLQEFDRLTI LRNALWVHCN 251 300 ENSP00000452746/1-416 QLSMQCVKDD ELYEEVRLTL EGCSIDADID SFIQAKSTGT EPPAPVPYQN ENSBTAP00000028179/1-416 QLSMQCVKDD ELYEEVRVTL EGCSVDADID GFIQAKSTGT EPPAPVPYQN ENSTTRP00000015176/1-415 QLSMQCVKDD ELYEEVRVTL EGCSVDADID SFIQAKSTGT EPPAPVPYQN bmy_01521T0/1-446 QLSMQCVKDD ELYEEVRVTL EGCSVDADID SFIQAKSTGT EPPAPVPYQN BACU017876/1-412 QLSMQCVKDD ELYEEVRVTL EGCSVDADID SFIQAKSTGT EPPAPVPYQN 301 350 ENSP00000452746/1-416 YYDREVTPLT SSPGIQPSCG MIKRFSGLLH GSPKTTSLAA SA-------- ENSBTAP00000028179/1-416 YYDREVAPLS SSPGVQPSCG MIKRFSGLLH GSPKTTLSAA SA-------- ENSTTRP00000015176/1-415 YYDREVAPLS SSPGVQPSCG MIKRFSGLLH GSPKTTSSAA SA-------- bmy_01521T0/1-446 YYDREVAPLS SSPGVQPSCG MIKRFSGLLH GSPKTTSSAA SAGTTVLCKG BACU017876/1-412 YYDREVGPLS SSPAVQPSCG MIKRFSGLLH GSPKTTSSAA SA-------- 351 400 ENSP00000452746/1-416 ---------A STETLTPTPE RNEGVYTAIA VQEIQGNPAS PAQEYRALYD ENSBTAP00000028179/1-416 ---------A STETLTPTPD RNEGVYAAIA VQEAPGPPTM PGQDYRALYD ENSTTRP00000015176/1-415 ---------A STETLTPTSD RNEGVYAAIA VQEAPGPHTL PAQDYRALYD bmy_01521T0/1-446 RVPGLTLLSA STETLTPTSD RNEGVYAAIA VQEAPGPHTL PAQDYRALYD BACU017876/1-412 ---------- --ETLTPTSD RNEGVYAAIA VQEAPGPHTL PAQDYRALYD 401 450 ENSP00000452746/1-416 YTAQNPDELD LSAGDILEVI LEGEDGWWTV ERNGQRGFVP GSYLEKL ENSBTAP00000028179/1-416 YTAQNSDELN ISAGDILEVI LEGEDGWWTV QRNGQRGFVP GSYLEKI ENSTTRP00000015176/1-415 YTAQNSDELN ISAGDILEVI QEGEDGWWTV QRNGQRGFVP GSYLEKL bmy_01521T0/1-446 YTAQNSDELN ISAGDILEVI QEGEDGWWTV QRNGQRGFVP GSYLEKL BACU017876/1-412 YTAQNSDELN ISAGDILEVI QEGEDGWWTV QRNGQRGFVP GSYLEKL