KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:34:40 2014 Check: 00 .. Name: ENSP00000359606/1-470 Len: 506 Check: 497 Weight: 1.00 Name: ENSBTAP00000028038/1-471 Len: 506 Check: 5784 Weight: 1.00 Name: ENSTTRP00000001251/1-473 Len: 506 Check: 157 Weight: 1.00 Name: bmy_16258T0/1-342 Len: 506 Check: 1556 Weight: 1.00 Name: BACU004614/1-482 Len: 506 Check: 5209 Weight: 1.00 // 1 50 ENSP00000359606/1-470 MEFAAENEGK SGGGLHSVAE GVRLSPEPGR EGVRDLAGAE EFGGGEEGTG ENSBTAP00000028038/1-471 MDFAAESEEM SGGGLQSEAE GARLSLDTDQ ERVR----TE ESGDGEAENG ENSTTRP00000001251/1-473 MDFAAENEET SGGGLQSGTE GARLSLESDG ERARGTVGTE EAGSGEAGNG bmy_16258T0/1-342 MDFAAENEET SGGGLQSGAE GARLSLESGG ERVRGTVGTE EAGGGEARNG BACU004614/1-482 MDFAAENEET SGEGLQSGAE GARLSLESGG ERVRGTVGTE EAGGGEAGNG 51 100 ENSP00000359606/1-470 LTGIKEIGDG EEGSGQRPEE IPMDLTVVKQ EIIDWPG-TE GRLAGQWVEQ ENSBTAP00000028038/1-471 LTGMEKTRAG EEESRRRAEE MRMDLTVVKQ EVMDWSEMVE GTLNGQWVKQ ENSTTRP00000001251/1-473 PTGMGKTGEG EEGNGPRAEE MRVDLAVVKQ EVMDWSEMEE GMRNDQWVKQ bmy_16258T0/1-342 LTGMGKT--G EEGNGPRAEE MRVDLAVVKQ EVMDWSEMEE GMRNDQWVKQ BACU004614/1-482 LTGIGKTGEG EEGNGPRAEE MRVDLAVVKQ EVVDWSEMEE GMRNDQWVKQ 101 150 ENSP00000359606/1-470 EVEDRPEVKD ENAGVLEVKQ ETDSSLVVKE AKVGEPEVKE EKV--KEEVM ENSBTAP00000028038/1-471 E-EDRHEVKE EKPGTLEVKE EMDSSLMVKE EKVEETEIKE EKVKVKEEVM ENSTTRP00000001251/1-473 EVEDGPEVKE EKPGTLEVKQ ETGSSLMLKE EKVEEPELKE EKVKVKEEVI bmy_16258T0/1-342 EVEDGPEVKE EKPGTLEVKQ EVDSSLMVKE EKVEEPELKE EKVKXKEEVM BACU004614/1-482 EVEDGPEVKE EKPGTLEVKQ EMDSSLMVKE EKVEEPELKE ENVKVKEEVM 151 200 ENSP00000359606/1-470 DWSEVKEE-K DNLEIKQEEK FVGQCI-KEE LMHGECVKEE KDFLKKEIVD ENSBTAP00000028038/1-471 DWLEVKEEKK DILEIKREEV SLDQNIKKEE IMDEMYVKEE KYFPKEEMVD ENSTTRP00000001251/1-473 DWLEVKEEKK DSLKIKGEEM FLDQNVKKEE IMDEVCVKEE KYFPKEEVMD bmy_16258T0/1-342 NWLEVKEEKK DSLEIKR-EM FLDQNVKKEE IMDEVCVKEE KYFPKEEVMD BACU004614/1-482 NWLEVKEEKK DSLEIKREEM FLDQNVKKEE IMDEVCVKEE KYFPKEEVMD 201 250 ENSP00000359606/1-470 DTKVKEEPPI NHPVGCKRKL AMSRCETCGT EEAKYRCPRC MRYSCSLPCV ENSBTAP00000028038/1-471 YTKVKEEPQI NPSVGSKRKL AMSRCETCGT EEAKYRCPRC LRYSCSLPCV ENSTTRP00000001251/1-473 DTKVKEEPQI NPPVGSKRKL AMSRCETCGT EEAKYRCPRC MRYSCSLPCV bmy_16258T0/1-342 DTKVKEEPQI NPPVGSKRKL AMSRCETCGT EEAKYRCPRC MRYSCSLPCV BACU004614/1-482 DTKVKEEPQI NPPVVSKRKL AMSRCETCGT EEAKYRCPRC MRYSCSLPCV 251 300 ENSP00000359606/1-470 KKHKAELTCN GVRDKTAYIS IQQFTEMNLL SDYRFLEDVA RTADHISRDA ENSBTAP00000028038/1-471 KKHKAELTCN GVRDKTAYVS IQQFTEMNLL SDYRFLEDVA RTADHISRDA ENSTTRP00000001251/1-473 KKHKAELTCN GVRDKTAYVS MQQFSEMNLL SDYRFLEDVA RTADHISRDA bmy_16258T0/1-342 KKHKTELTCN GVRDKTAYVS IQQFTEMNLL SDYRFLEDVA RTADHISRDA BACU004614/1-482 KKHKAELTCN GVRDKTAYVS MQQFTEMNLL SDYRFLEDVA RTADHISRDA 301 350 ENSP00000359606/1-470 FLKRPISNKY MYFMKNRARR QGINLKLLPN GFTKRKENST FFDKKKQQFC ENSBTAP00000028038/1-471 FLKRPISNKH MYFMKNRARK QGINLKLLPN GFTKRKENST FFDKKKQQFC ENSTTRP00000001251/1-473 FLKRPISNKH MYFMKNRARK QAINLKLLPN GFTKRKENST FFDKKKRQFC bmy_16258T0/1-342 FLKRPMSNKH MYFMKNRARK QGINLKLLPN GFTKRKENST FFDKK----- BACU004614/1-482 FLKRPMSNKH MYFMKNRARK QGINLKLLPN GFTKRKENST FFDKK----- 351 400 ENSP00000359606/1-470 WHVKLQFPQS QAEYIEKRVP DDKTINEILK PYIDPEKSDP VIRQRLKAYI ENSBTAP00000028038/1-471 WHVKLQFPQS QAVYVEKRVP DDKTINEILR PYIDPEKSDP VIRQRLKAYI ENSTTRP00000001251/1-473 WHVKLQFPQS QAVYVEKRVP DDKTINEIVR RYIDREKSDP VIRQRLKAYI bmy_16258T0/1-342 ---------- ---------- ---------- ---------- ---------- BACU004614/1-482 ---------- --------VP DDKTINEILR PYIDPEKSDP VIRQRLKAYI 401 450 ENSP00000359606/1-470 RSQTGVQILM KIEYMQQNLV -RYYELDPYK SLLDNLRNKV IIEYPTLHVV ENSBTAP00000028038/1-471 CCQTGVQILM KVENMQQNLV RRYYELDPDR SLLDNLRGKV ILEYPTLHVV ENSTTRP00000001251/1-473 HSQTGVRILM KAENMQQNLV -RYYEMDPDK SLLDNLRNKV IIEYPTLHVV bmy_16258T0/1-342 ---------- ---------- ---------- ---------- ---------- BACU004614/1-482 HSQTGVRILM KVENMQQNLV -RYYEMDPDK SLLDNLRNKV IIEYPTLHVV 451 500 ENSP00000359606/1-470 LKGSNNDMKV LHQVKSESTK ----NVGNEN ---------- ---------- ENSBTAP00000028038/1-471 LKEYSNDMKV LHQVKSESTK ----NIGDEN ---------- ---------- ENSTTRP00000001251/1-473 -KRYSNDMEV LHQVKGESTK ----NIGNN- ---------- ---------- bmy_16258T0/1-342 ---------- ---------- ---------- ---------- ---------- BACU004614/1-482 LKEYSNDMEV LQDKKKEEER RNKANVTDSD LRFQPVEIVD RYENVPCGHF 501 550 ENSP00000359606/1-470 ------ ENSBTAP00000028038/1-471 ------ ENSTTRP00000001251/1-473 ------ bmy_16258T0/1-342 ------ BACU004614/1-482 SSPFSF