KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:34:28 2014 Check: 00 .. Name: ENSP00000354206/1-722 Len: 722 Check: 4459 Weight: 1.00 Name: ENSBTAP00000027974/1-716 Len: 722 Check: 7856 Weight: 1.00 Name: ENSTTRP00000004026/1-716 Len: 722 Check: 9681 Weight: 1.00 Name: BACU018867/1-715 Len: 722 Check: 362 Weight: 1.00 Name: bmy_13699T0/1-716 Len: 722 Check: 9892 Weight: 1.00 // 1 50 ENSP00000354206/1-722 MEGSRPRAPS GHLAPSPPAF DGELDLQRYS NGPAVSAGSL GMGAVSWSES ENSBTAP00000027974/1-716 MEGSRPRAPV GHLAPSPPAF DGELDLQRYS NGPGVSAGSP GMGAVGWSES ENSTTRP00000004026/1-716 MEGSRPRAPG GHLAPSPPAF DGELDLQRYS NGPGVSAGSP GMGAVGWSES BACU018867/1-715 -QGSRPRAPG GHLAPSPPAF DGELDLQRYS NGPGVSAGSP GMGAVGWSES bmy_13699T0/1-716 MEGSRPRAPG GHLAPSPPAF DGELDLQRYS NGPGVSAGSP GMGAVGWSES 51 100 ENSP00000354206/1-722 RAGERRFPCP VCGKRFRFNS ILALHLRAHP GAQAFQCPHC GHRAAQRALL ENSBTAP00000027974/1-716 RAGERRFPCP VCGKRFRFNS ILALHLRAHP GAQAFQCPHC GHRAAQRALL ENSTTRP00000004026/1-716 RTGERRFPCP VCGKRFRFNS ILALHLRAHP GAQAFQCPHC GHRAAQRALL BACU018867/1-715 RTGERRFPCP VCGKRFRFNS ILALHLRAHP GAQAFQCPHC GPRAAQRALL bmy_13699T0/1-716 RTGERRFPCP VCGKRFRFNS ILALHLRAHP GAQAFQCPHC GHRAAQRALL 101 150 ENSP00000354206/1-722 RSHLRTHQPE RPRSPAARLL LELEERALLR EARLGRARSS GGMQATPATE ENSBTAP00000027974/1-716 RSHLRTHQPE RPRSPAARLL LELEERALLR EARLGRPRSS GGLQATPATE ENSTTRP00000004026/1-716 RSHLRTHQPE RPRSPAARLL LELEERALLR EARLGRPRSS GGLQATPATE BACU018867/1-715 RSPLRTHQPE RPRSPAARLL LELEERALLR EARLGRPRSS GGLQATPATE bmy_13699T0/1-716 RSHLRTHQPE RPRSPAARLL LELEERALLR EARLGRPRSS GGLQATPATE 151 200 ENSP00000354206/1-722 GLARPQAPSS SAFRCPYCKG KFRTSAERER HLHILHRPWK CGLCSFGSSQ ENSBTAP00000027974/1-716 GLPRPQASSS SAFRCPFCKG KFRTAAERER HLHILHRPWK CGLCSFGSSQ ENSTTRP00000004026/1-716 GLARSQAPSS SAFRCPFCKG KFRTAAERER HLHILHRPWK CGLCSFGSSQ BACU018867/1-715 GLARSQAPSS SAFRCPFCKG KFRTAAERER HLHILHRPWK CGLCSFGSSQ bmy_13699T0/1-716 GLARSQAPSS SAFRCPFCKG KFRTAAERER HLHILHRPWK CGLCSFGSSQ 201 250 ENSP00000354206/1-722 EEELLHHSLT AHGAPERPLA ATSAAPPPQP QPQPPPQPEP RSVPQPEPEP ENSBTAP00000027974/1-716 EEELLHHSLT AHGAPERPLA ATSAA----P QPQPPPQPEP RSVPE--PEP ENSTTRP00000004026/1-716 EEELLHHSLT AHGAPERPLA ATSAA----P QPQPPPQPEP RSVPE--PEP BACU018867/1-715 EEELLHHSLT AHGAPERPLA ATSAA----P QPQPPPQPEP RSVPE--PEP bmy_13699T0/1-716 EEELLHHSLT AHGAPERPLA ATSAA----P QPQPPPQPEP RSVPE--PEP 251 300 ENSP00000354206/1-722 EPEREATPTP APAAPEEPPA PPEFRCQVCG QSFTQSWFLK GHMRKHKASF ENSBTAP00000027974/1-716 EPESEATPAP APAAPEEPPA PPEFRCQVCG QSFTQSWFLK GHMRKHKASF ENSTTRP00000004026/1-716 EPEREATPVS APAAPEEPPA PPEFRCQVCG QSFTQSWFLK GHMRKHKASF BACU018867/1-715 EPEREATPVS APAAPEETPA PPEFRCQVCG QSFTQSWFLK GHMRKHKASF bmy_13699T0/1-716 EPEREATPVS APAAPEEPPA PPEFRCQVCG QSFTQSWFLK GHMRKHKASF 301 350 ENSP00000354206/1-722 DHACPVCGRC FKEPWFLKNH MKVHASKLGP LRAPGPASGP ARAPQPPDLG ENSBTAP00000027974/1-716 DHACPVCGRC FKEPWFLKNH MKVHASKLGP LRAPGPGSGP ARAPQPPDLG ENSTTRP00000004026/1-716 DHACPVCGRC FKEPWFLKNH MKVHASKLGP LRAPGPGSGP ARAPQPPDLG BACU018867/1-715 DHACPVCGRC FKEPWFLKNH MKVHASKLGP LRAPGPGSGP ARAPQPPDLG bmy_13699T0/1-716 DHACPVCGRC FKEPWFLKNH MKVHASKLGP LRAPGPGSGP ARAPQPPDLG 351 400 ENSP00000354206/1-722 LLAYEPLGPA LLLAPAPTPA ERREPPSLLG YLSLRAGEGR PNGEGAEPGP ENSBTAP00000027974/1-716 LLAYEPLGPA LLLAPAPTPA ERREPPSLLG YLSLRAGEAR PNGEGAEPGA ENSTTRP00000004026/1-716 LLAYEPLGPA LLLAPAPTPA ERREPPSLLG YLSLRAGEAR PNGEGAEPGA BACU018867/1-715 LLASEPLGPA LLLAPAPTPA ERREPPSLLG YLSLRAGEAR PNGEGAEPGA bmy_13699T0/1-716 LLAYEPLGPA LLLAPAPTPA ERREPPSLLG YLSLRAGEAR PNGEGAEPGA 401 450 ENSP00000354206/1-722 GRSFGGFRPL SSALPARARR HRAEEPEEEE EVVEAEEETW ARGRSLGSLA ENSBTAP00000027974/1-716 GRSFGSFRPL PSALPARARR HRAEEPDEEE EVVEAEEETW ARSRAVGPLA ENSTTRP00000004026/1-716 GRSFGGFRPL PSALPGRARR HRAEEPDEEE EVVEAEEETW AQSRAVGPLA BACU018867/1-715 GRSFGGFRPL PSALPGRARR HRAEEPDEEE EVVEAEEETW ARSRAVGPLA bmy_13699T0/1-716 GRSFGGFRPL PSALPGRARR HRVEEPDEEE EVVEAEEETW ARSRAVGPLA 451 500 ENSP00000354206/1-722 SLHPRPGEGP GHSASAAGAQ ARSTATQEEN GLLVGGTRPE GGRGATGKDC ENSBTAP00000027974/1-716 SLPSRPGEAP GHSAPAAGAQ ARSTATQEEN GLLVGGARPE GGRGATGKDC ENSTTRP00000004026/1-716 SLPPRPGEGP GNSATAAGAQ ARSSATQEEN GLLVGGARPE GGRGASGKDC BACU018867/1-715 SLPPRSGEGP GHSATAAGAP ARSTATQEEN GLLVGGTRPE GGRGATGKDC bmy_13699T0/1-716 SLPPRPGEGP GHSATAAGAP ARSTATQEEN GLLVGGTRPE GGRGATGKDC 501 550 ENSP00000354206/1-722 PFCGKSFRSA HHLKVHLRVH TGERPYKCPH CDYAGTQSGS LKYHLQRHHR ENSBTAP00000027974/1-716 PFCGKSFRSA HHLKVHLRVH TGERPYKCPH CDYAGTQSGS LKYHLQRHHR ENSTTRP00000004026/1-716 PFCGKSFRSA HHLKVHLRVH TGERPYKCPH CDYAGTQSGS LKYHLQRHHR BACU018867/1-715 PFCGKSFRSA HHLKVHLRVH TGERPYKCPH CDYAGTQSGS LKYHLQRHHR bmy_13699T0/1-716 PFCGKSFRSA HHLKVHLRVH TGERPYKCPH CDYAGTQSGS LKYHLQRHHR 551 600 ENSP00000354206/1-722 EQRSGAGPGP PPEPPPPSQR GSAPQSGAKP SPQPATWVEG ASSPRPPSSG ENSBTAP00000027974/1-716 EQKSGAGPGP PPEPPPPSQR GSGQSSGAKA APQPATWVEG RASPRPPASG ENSTTRP00000004026/1-716 EQKSGAGPGP PPEPPPPSQR GATQSSGAKP AAQPATWVEG TASSRPPSSG BACU018867/1-715 EQKSGAGPGP PPEPPPPSQR GATQSSGAKP AAQPATWVEG TASSRPPSSG bmy_13699T0/1-716 EQKSGAGPGP PPEPPPPSQR GATQSSGAKP AAQPATWVEG TASSRPPSSG 601 650 ENSP00000354206/1-722 AGPGSRRKPA SPGRTLRNGR GGEAEPLDLS LRAGPGGEAG PGGALHRCLF ENSBTAP00000027974/1-716 GAPGSRRKPA SPGRTLRNGR GGEAEPLDLS LRAGPGGEAG PGGALHRCLF ENSTTRP00000004026/1-716 AASGSRRKPA SPGRTLRNGR GGEAEPLDLS LRAGPGGEAG PGGALHRCLF BACU018867/1-715 AASGSRRKPA SPGRTLRNGR GGEAEPLDLS LRAGPGGEAG PGGALHRCLF bmy_13699T0/1-716 AASGSRRKPA SPGRTLRNGR GGEAEPLDLS LRAGPGGEAG PGGALHRCLF 651 700 ENSP00000354206/1-722 CPFATGAPEL MALHLQVHHS RRARGRRPPQ ADASPPYARV PSGETPPSPS ENSBTAP00000027974/1-716 CPFATGAPEL MALHLQVHHS RRARGRRPPQ ADASPPYARA PSGETPPTPP ENSTTRP00000004026/1-716 CPFATGAPEL MALHLQVHHS RRARGRRPPQ ADASPPYARA PSGETPPSPP BACU018867/1-715 CPFATGAPEL MALHLQVHHS RRARGRRPPQ ADASPPYARA PSGETPPSPP bmy_13699T0/1-716 CPFATGAPEL MALHLQVHHS RRARGRRPPQ ADASPPYARA PSGETPPSPP 701 750 ENSP00000354206/1-722 QEGEEGSGLS RPGEAGLGGQ ER ENSBTAP00000027974/1-716 QEGEEGPGLL RSGEAGLGGQ ER ENSTTRP00000004026/1-716 QEGEEGPGLL RSGEPGLGGQ ER BACU018867/1-715 QEGEEGPGLL RSGEAGLGGQ ER bmy_13699T0/1-716 QEGEEGPGLL RSGEAGLGGQ ER