KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:34:17 2014 Check: 00 .. Name: ENSTTRP00000006519/1-342 Len: 444 Check: 4011 Weight: 1.00 Name: ENSBTAP00000027919/1-270 Len: 444 Check: 387 Weight: 1.00 Name: ENSP00000349547/1-344 Len: 444 Check: 3190 Weight: 1.00 Name: BACU002375/1-381 Len: 444 Check: 6405 Weight: 1.00 Name: bmy_15922T0/1-340 Len: 444 Check: 2061 Weight: 1.00 // 1 50 ENSTTRP00000006519/1-342 MSAEPELIEL RDLAPARCAA PGRTRLERAN ALRIAPGTAR NAARQLVPGR ENSBTAP00000027919/1-270 ---------- ---------- ---------- ---------- ---------- ENSP00000349547/1-344 MSGEPELIEL RELAPAGRAG KGRTRLERAN ALRIARGTAC NPTRQLVPGR BACU002375/1-381 ---------- ---------- ---------- ---------- ---------- bmy_15922T0/1-340 MSAEPELIEL RDLAPARCAA PGRTRLERAN ALRIAPGTAR NAARQLVPGR 51 100 ENSTTRP00000006519/1-342 GHRFQAG--T THTWCDLCGD FXXXXXXXXX XXXX----CK FTCHYRCRAL ENSBTAP00000027919/1-270 ---------- ---------- ---------- ---------- ---------- ENSP00000349547/1-344 GHRFQPAGPA THTWCDLCGD FIWGVVRKGL QCARLSADCK FTCHYRCRAL BACU002375/1-381 ---------T THTWCDLCGD FIWGVVRKGL QCAH----CK FTCHYRCRAL bmy_15922T0/1-340 GHRFQPAGPT THTWCDLCGD FIWGVVRKGL QCAH----CK FTCHYRCRAL 101 150 ENSTTRP00000006519/1-342 VCLDCCGPRD LGWEPALERD TNV------- ---------- ---------- ENSBTAP00000027919/1-270 -----MGEAD AG--PSFEMT WNS------T TTLYCSQEDS DSELEQYFTA ENSP00000349547/1-344 VCLDCCGPRD LGWEPAVERD TNV------- ---------- ---------- BACU002375/1-381 VCLDCCGPRD LGWEPALERD TNVMTWSSTT SSGYCSQEDS DSELEQYFTA bmy_15922T0/1-340 VCLDCCGPRD LGWEPALERD TNV------- ---------- ---------- 151 200 ENSTTRP00000006519/1-342 --------PI FQDEPVEWET PDLSQAEIEQ KIKEYNGQIN SNLFMSLNKD ENSBTAP00000027919/1-270 RTSLARRPRR DQDEPVEWET PDLSQAEIEQ KIKEYNGQIN SNLFMSLNKD ENSP00000349547/1-344 ---------- --DEPVEWET PDLSQAEIEQ KIKEYNAQIN SNLFMSLNKD BACU002375/1-381 RTSLARRPRR DQDEPVEWET PDLSQAEIEQ KIKEYNGQIN SNLFMSLNKD bmy_15922T0/1-340 ---------- --DEPVEWET PDLSQAETEQ KIKEYNGQIN SNLFMSLNKD 201 250 ENSTTRP00000006519/1-342 GSYTGFIKVQ LKLVRPVSVP ASKKPPSLQD ARRGPGRGTA VKRRTSFYLP ENSBTAP00000027919/1-270 GSYTGFIKVQ LKLVRPVSVP SSKKPPSLQD ARRGPGRGTA VKRRTSFYLP ENSP00000349547/1-344 GSYTGFIKVQ LKLVRPVSVP SSKKPPSLQD ARRGPGRGTS VRRRTSFYLP BACU002375/1-381 GSYTGFIKVQ LKLVRPVSVP ASKKPPSLQD ARRGPGRGTA VKRRTSFYLP bmy_15922T0/1-340 GSYTGFIKVQ LKLVRPVSVP ASKKPPSLQD ARRGPGRGTA VKRRTSFYLP 251 300 ENSTTRP00000006519/1-342 KDAVKHLHVL SRTRAREVIE ALLRKFLVVD DPRKFALFER AERHGQVYLR ENSBTAP00000027919/1-270 KDAVKHLHVL SRTRAREVIE ALLRKFLVVD DPRKFALFER AERHGQVYLR ENSP00000349547/1-344 KDAVKHLHVL SRTRAREVIE ALLRKFLVVD DPRKFALFER AERHGQVYLR BACU002375/1-381 KDAVKHLHVL SRTRAREVIE ALLRKFLVVD DPRKFALFER AERHGQVYLR bmy_15922T0/1-340 KDAVKHLHVL SRTRAREVIE ALLRKFLVVD DPRKFALFER AERHGQVYLR 301 350 ENSTTRP00000006519/1-342 KLSDDEQPLR LRLLAGPSEK ALSFVLKEND SGEVNWDAFS MPELHNFLRI ENSBTAP00000027919/1-270 KLSDDEQPLR LRLLAGPSEK ALSFVLKEND SGEVNWDAFS MPELHNFLRI ENSP00000349547/1-344 KLLDDEQPLR LRLLAGPSDK ALSFVLKEND SGEVNWDAFS MPELHNFLRI BACU002375/1-381 KLSDDEQPLR LRLLAGPSEK ALSFVLKEND SGEVNWDAFS MPELHNFLRI bmy_15922T0/1-340 KLSDDEQPLR LRLLAGPSEK ALSFVLKEND SGEVNWDAFS MPELHNFLRI 351 400 ENSTTRP00000006519/1-342 LQREEEEHLR QILQKYSYCR QKIQEALHAC PLG------- ---------- ENSBTAP00000027919/1-270 LQREEEEHLR QILQKYSYCR QKIQEALHAC PLG------- ---------- ENSP00000349547/1-344 LQREEEEHLR QILQKYSYCR QKIQEALHAC PLG------- ---------- BACU002375/1-381 LQREEEEHLR QILQKYSYCR QKIQEALHAC PLGSMFYDED GDLAHEFYEE bmy_15922T0/1-340 LQREEEEHLR QILQKYSYCR QKIQEALHAC PLG------- ---------- 401 450 ENSTTRP00000006519/1-342 ---------- ---------- ---------- ---------- ---- ENSBTAP00000027919/1-270 ---------- ---------- ---------- ---------- ---- ENSP00000349547/1-344 ---------- ---------- ---------- ---------- ---- BACU002375/1-381 TIVTKNGQKR AKLRRVHKNL IPQGIVKLDP PRIHVDFPVI LYEV bmy_15922T0/1-340 ---------- ---------- ---------- ---------- ----