KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:33:55 2014 Check: 00 .. Name: ENSP00000321853/1-491 Len: 529 Check: 6436 Weight: 1.00 Name: ENSBTAP00000027793/1-492 Len: 529 Check: 2355 Weight: 1.00 Name: ENSTTRP00000006498/1-494 Len: 529 Check: 3913 Weight: 1.00 Name: bmy_00177T0/1-525 Len: 529 Check: 605 Weight: 1.00 Name: BACU010456/1-491 Len: 529 Check: 6547 Weight: 1.00 // 1 50 ENSP00000321853/1-491 ---------- ---------- ---------- ----MALLW- --GLLVLSWS ENSBTAP00000027793/1-492 ---------- ---------- ---------- ----MALLW- --GLLALILS ENSTTRP00000006498/1-494 ---------- ---------- ---------- ----MALLWL PELVLVLSLS bmy_00177T0/1-525 EGSAGLAGTR AERGEHPSGA RGTSCAAARS LPRNMALLW- --GLLVLSLS BACU010456/1-491 ---------- ---------- ---------- ----MALLW- --GLLVLSLS 51 100 ENSP00000321853/1-491 CLQGPCSV-F SPVSAMEPLG RQLTSGPNQE QVSPLTLLKL GNQEPGGQTA ENSBTAP00000027793/1-492 CLSSLCSAQF SPVSTMEPLD LQLMDGQAQQ KLPPLSLLKL DNQEPGGQIA ENSTTRP00000006498/1-494 CLQSPCSA-F SPVSTMEPLG LQLMSGQTQQ KLPPLSLLKL GNQEPGGQTA bmy_00177T0/1-525 CLQSPCSA-F SPVSTMEPLG LQLMSGQTQQ KLPLLSLLKL GNQEPGGQTA BACU010456/1-491 CLQSPCSA-F SPVSTMEPLG LQLMSGQTQQ KLPLLSLLKL GNQEPGGQTA 101 150 ENSP00000321853/1-491 LKSPPGVCSR DPTPEQTHRL ARAMMAFTAD LFSLVAQTST CPNLILSPLS ENSBTAP00000027793/1-492 PKKAPEDCKL SPTPEQTRRL ARAMMTFTTD LFSLVAQSST RPNLILSPLS ENSTTRP00000006498/1-494 PKKAPGDCEG SPNPEQTRRL AQAMMAFTRD LFSLVAQNST RPNLILSPLS bmy_00177T0/1-525 PKKAPGDCKG SPNPEQTRRL AQAMMAFTTD LFSLVAQSST RPNLILSPLS BACU010456/1-491 PKKAPGDCKG SPNPEQTRRL AQAMMAFTTD LFSLVAQSST RPNLILSPLS 151 200 ENSP00000321853/1-491 VALALSHLAL GAQNHTLQRL QQVLHAGSGP CLPHLLSRLC QDLGPGAFRL ENSBTAP00000027793/1-492 VALALSHLAL GAQNQTLQRL KEVLHADSGP CLPHLLSRLC QDLGPGAFRL ENSTTRP00000006498/1-494 VALALSHLAL GAQNQTLQRL QQVLHVDSGP CLPHLLSRLC QDLGPGAFRL bmy_00177T0/1-525 VALALSHLAL GAQNQTLQRL QQVLHVDSGP CLPHLLSRLC QDLGPGAFRL BACU010456/1-491 VALALSHLAL GAQNQTLQRL QQVLHVDSGP CLPHLLSRLC QDLGPGAFRL 201 250 ENSP00000321853/1-491 AARMYLQKGF PIKEDFLEQS EQLFGAKPVS LTGKQEDDLA NINQWVKEAT ENSBTAP00000027793/1-492 AARMYLQKGF PIKEDFLEQS EQLFGAKPMS LTGMKGEDLA NINRWVKEAT ENSTTRP00000006498/1-494 AARMYLQKGF PIKKDFLEQS EQLFGAKPMS LTGRKRDDLA NINQWVKEAT bmy_00177T0/1-525 AARMYLQKGF PIKEDFVEQS EQLFGAKPMS LTGRKRDDLA NINQWVKEAT BACU010456/1-491 AARMYLQKGF PIKEDFMEQS EQLFGAKPMS LTGRKRDDLA NINQWVKEAT 251 300 ENSP00000321853/1-491 EGKIQEFLSG LPEDTVLLLL NAIHFQGFWR NKFDPSLTQR DSFHLDEQFT ENSBTAP00000027793/1-492 EGKIEDFLSD LPDDTVLLLL NAIHFQGFWR SKFDPNLTQR GAFHLDEQFT ENSTTRP00000006498/1-494 EGKIEDFLSD LPDDTVLLLL NAIHFQGFWR RKFDPNLTRR DTFHLDEQFT bmy_00177T0/1-525 EGKIEDFLSD LPDDTVLLLL NAIHFQGFWR RKFDPNLTQR DTFHLDEQFT BACU010456/1-491 EGKIEDFLSD LPDDTVLLLL NAIHFQGFWR RKFDPDLTQR DTFHLDEQFT 301 350 ENSP00000321853/1-491 VPVEMMQART YPLRWFLLEQ PEIQVAHFPF KNNMSFVVLV PTHFEWNVSQ ENSBTAP00000027793/1-492 VPVDMMQALT YPLHWFLLEQ PEIQVAHFPF KNNMSFVVLM PTRFEWNASQ ENSTTRP00000006498/1-494 VPVDMMQART YPLRWFLLEQ PEIQVAHFPF KNNMSFVVVV PTRFEWNASQ bmy_00177T0/1-525 VPVDMMQART YPLRWFLLEQ PEIQVAHFPF KNNMSFVVIV PTHFEWNVSQ BACU010456/1-491 VPVDMMQART YPLRWFLLEQ PEIQVARFPF KNNMSFVVIM PTHFEWNVSQ 351 400 ENSP00000321853/1-491 VLANLSWDTL HPPLVWERPT KVRLPKLYLK HQMDLVATLS QLGLQELFQA ENSBTAP00000027793/1-492 VLANLTWDIL HQPSLSERPT KVQLPKLHLK YQLDLVATLS QLGLQELFQA ENSTTRP00000006498/1-494 VLASLSWGVL HQPLLRERPT TVQLPKLHLK YQMDLVAILS QLGLQELFQA bmy_00177T0/1-525 VLANLSWGIL HQPLLRERPT KVQLPKLHLK YQMDLVAILS QLGLQELFQA BACU010456/1-491 VLANLSWGIL HQPLLRERPT KVQLPKLHLK YQMDLVAILN QLGLQELFQA 401 450 ENSP00000321853/1-491 PDLRGISEQS LVVSGVQHQS TLELSEVGVE AAAATSIAMS RMSLSSFSVN ENSBTAP00000027793/1-492 PDLRGISDER LVVSSVQHQS ALELSEAGVQ AAAATSTAMS RMSLSSFIVN ENSTTRP00000006498/1-494 PDLRGISDQS LVVSSVQHQS TLELREAGVE AAATTSTAMS RMSLSSFSVN bmy_00177T0/1-525 PDLRGISDQS LVVSSVQHQS TLELREAGVE AAATTSTAMS RMSLSSFSVN BACU010456/1-491 PDLRGISDQS LVVSSVQHQS TLELREVGVE AAATTSTAMS RMSLSSFSVN 451 500 ENSP00000321853/1-491 RPFLFFIFED TTGLPLFVGS VRNPNPSAPR ELKEQQDSPG NKDFLQSLKG ENSBTAP00000027793/1-492 RPFLFFILED STSLPLFVGS VRNPNPGAQP ERKEQQDSPD GKDSFQDHKG ENSTTRP00000006498/1-494 RPFLFFILED SMSLPLFVGS VRNPNPGAQP ELKEQQDSPD NKDFFQHQKG bmy_00177T0/1-525 RPFLFFILED STSLPLFVGS VRNPNPGAQP EPKEQQDSPD NRDFFQHQKV BACU010456/1-491 RPFLFFILED STSLPLFVGS VRNPNPGAQP EPKEQQDSPD NRDFLQHQKV 501 550 ENSP00000321853/1-491 FPRGDKLFGP DLKLVPPMEE DYPQFGSPK ENSBTAP00000027793/1-492 LPRGDKPFDP DLKLGPPSEE DYAQPSSPK ENSTTRP00000006498/1-494 FPRGDKPFGP DLKLAPPSEE DYPQPSSPK bmy_00177T0/1-525 FPRGDKPFGP DLKLAPPSEE DYPQPSSPK BACU010456/1-491 FPRGDKPFGP DLKLAPPSEE DYPQPSSPK