KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:33:49 2014 Check: 00 .. Name: ENSTTRP00000013481/1-222 Len: 245 Check: 7591 Weight: 1.00 Name: ENSP00000362601/1-224 Len: 245 Check: 3093 Weight: 1.00 Name: bmy_15874T0/1-171 Len: 245 Check: 5370 Weight: 1.00 Name: ENSBTAP00000027751/1-244 Len: 245 Check: 2271 Weight: 1.00 // 1 50 ENSTTRP00000013481/1-222 MSILLPNMAE FDTISELEEE EEEAAT--SS SSPSSSSSVS GPDDDEEDEE ENSP00000362601/1-224 MSILLPNMAE FDTISELEEE EEEEAAT-SS SSPSSSSSVS GPDDDEEDEE bmy_15874T0/1-171 MSILLPNMAE FDTISELEEE EEEEAAT-SS SSPSSSSSVS GPDDDEEDEE ENSBTAP00000027751/1-244 MSILLPNMAE FDTISELEEE EEEEAATSSS SSPSSSSSVS GPDDDEEDEE 51 100 ENSTTRP00000013481/1-222 EEEE--EEEE EEEEEQVEDT PPPPRVVSEE HLRRYAPDPV LVRGAGHITV ENSP00000362601/1-224 EEEEEEEEEE EEEEEEEEEA PPPPRVVSEE HLRRYAPDPV LVRGAGHITV bmy_15874T0/1-171 EEEEE-EEEE EEEEEQVEET PPPPRVVSEE HLRRYAPDPV LVRGAGHITV ENSBTAP00000027751/1-244 EEEEENEEEE EEEEEQVEET PPPPRVVSEE HLRRYAPDPV LVRGAGHITV 101 150 ENSTTRP00000013481/1-222 FGLSNKFDTE FPSVLTGKVA PEEFKTSIGR VNACLKKALP VNVKWLLCGC ENSP00000362601/1-224 FGLSNKFDTE FPSVLTGKVA PEEFKTSIGR VNACLKKALP VNVKWLLCGC bmy_15874T0/1-171 FGLSNKFDTE FPSVLTGK-- ---------- ---------- ---------- ENSBTAP00000027751/1-244 FGLSNKFDTE FPSVLTGKVA PEEFKTSIGR VNACLKKALP VNVKWLLCGC 151 200 ENSTTRP00000013481/1-222 LCCCCTLGCS LWPVICLNKR TRRSIQKLLE WENNRLYHKL ALHWKLTKRK ENSP00000362601/1-224 LCCCCTLGCS LWPVICLNKR TRRSIQKLIE WENNRLYHKL ALHWKLTKRK bmy_15874T0/1-171 ---------- ---------- TRRSIQKLLE WENNRLYHKL ALHWKLTKRK ENSBTAP00000027751/1-244 LCCCCTLGCS LWPVICLNKR TRRSIQKLLE WENNRLYHKL ALHWKLTKRK 201 250 ENSTTRP00000013481/1-222 CETSMXXXXX VILIEFLPKY PIFRPD---- ---------- ----- ENSP00000362601/1-224 CETS-NMMEY VILIEFLPKY PIFRPD---- ---------- ----- bmy_15874T0/1-171 CETS-NMMEY VILIEFLPKY PIFRPD---- ---------- ----- ENSBTAP00000027751/1-244 CETS-NMMEY VILIEFLPKY PIFRPLRNFI QSLLFYLSFP TLSAL