KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:32:33 2014 Check: 00 .. Name: ENSP00000373964/1-461 Len: 462 Check: 9761 Weight: 1.00 Name: ENSBTAP00000027457/1-458 Len: 462 Check: 1417 Weight: 1.00 Name: ENSTTRP00000000573/1-447 Len: 462 Check: 1493 Weight: 1.00 Name: bmy_00221T0/1-456 Len: 462 Check: 1303 Weight: 1.00 Name: BACU006939/1-314 Len: 462 Check: 3189 Weight: 1.00 // 1 50 ENSP00000373964/1-461 MEPAPDAQEA RTVREALGRY EAALEGAVRA LHEDMRGLQR GVERRVAEAM ENSBTAP00000027457/1-458 MESAPDAEEA RTVREALGRY EAALEGAVRA LHEDMQGLQR GVEQRVAEAL ENSTTRP00000000573/1-447 MEPAPDAEEA RTVREALGRY EAALEGAVRA LHEDMQGLQR GVEQRVAEAL bmy_00221T0/1-456 MEPAPDAEEA RTVREALGRY EAALEGAVRA LHEDMQGLQR GVEQRVAEAL BACU006939/1-314 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000373964/1-461 RLAGPLARTV ADLQRDNQRL QAQLERLTRQ VEALGLASGM SPVPGTPGTP ENSBTAP00000027457/1-458 RLAGPLARTV AELQRDNQRL QTQLERLTRQ VESLGLTTGL AP---APGTP ENSTTRP00000000573/1-447 HLAGPLARTV TELQRDNQRL QAQLERLTRQ VEALGLTTGL AP---APGTP bmy_00221T0/1-456 HLAGPLARTV TELQRDNQRL QAQLERLTRQ VEALGLKTGL AP---APGTP BACU006939/1-314 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000373964/1-461 SPPPAPGVPD RAPRLGSARF ASHATFSLSG RGQSLD-HDE ASESEMRKTS ENSBTAP00000027457/1-458 SPPPAPGVPN RAPRLGTARF ASHATFSLSG RSQSLDHHDE ASELEMRRTS ENSTTRP00000000573/1-447 SPPPAPGVPD RAPRLGTARF ASHATFSLSG RGQSMDHHDE AGESEMRRTS bmy_00221T0/1-456 SPPPAPGVPD RAPRLGTARF ASHATFSLSG RGQSVDYHDE ASESEMRRTS BACU006939/1-314 ---------- ---------- ---------- ---------- -----MRRTS 151 200 ENSP00000373964/1-461 NSCIMENGHQ PGAGPGDGPP EIAQNFSAPD PPRPRPVSLS LRLPHQPVTA ENSBTAP00000027457/1-458 NSCIIENGHQ PGADPGDGPP EATQTIPAPE PPKPRPVSLS LRLPHQPVTA ENSTTRP00000000573/1-447 DSCIVENGHQ PGAGPGDGPP ETTQTVPAPE PPKPRPASLS LRLPHQPVTA bmy_00221T0/1-456 NSCIVENGHQ PGAGPGDGPP ETTQTIPAPE PPKPRPASLS LRLPHQPVTA BACU006939/1-314 NSCIVENGHQ PGAGPGDGPP ETTQTVPAPE PPKPRPANLS LRLPHQPVTA 201 250 ENSP00000373964/1-461 ITRVSDRFSG ETSAAALSPM SAATLGGLNP SPSEVITPWT PSPSEKNSSF ENSBTAP00000027457/1-458 VTRVSERFSG ETSATALSPT SAAILGGLSS SPSEATTPWT PSPSEKNSSL ENSTTRP00000000573/1-447 ITRVSERFSG ETSAAALSPT SAAVLGGL-- -PSEATTPWT PSPTEKNSSL bmy_00221T0/1-456 VTRVSEKFSG ETSAAALSPT SAAVLGGL-- SPSEATTPWT PSPSEKNSSL BACU006939/1-314 VTRVSERFSG ETSAAALSPT SAAVLGGL-- SPSEATTPWT PSPSEKNSSL 251 300 ENSP00000373964/1-461 TWSVPSSGYG AVTASKHSNS PPLVTPPQSP VSPQPPAITQ VHRQGERRRE ENSBTAP00000027457/1-458 PRSLSSSGFG AMTASRNNNS PPLVTPPQSP PSPQPPATTQ AHRPGERRRE ENSTTRP00000000573/1-447 PRSLSSSGYG AVTASRNNGS PPLVTPPESL PSPQPPATTQ AHRQGERRRE bmy_00221T0/1-456 PRSLSSSGHR AVTASRSNDS PPLVTPPQSL PSPQPPATTQ AHRQGEHRRE BACU006939/1-314 PRSLSSSGHR AVTASRSNDS PPLVTPPQSL PSPQPPATTQ AHRPGEHRRE 301 350 ENSP00000373964/1-461 LVRSQTLPRT SEAQARKALF EKWEQETAAG KGKGEARARL KRSQSFGVAS ENSBTAP00000027457/1-458 LVRSQTLPRT SGAQARKALF EKWEQDT-AG KGKGETRAKL KRSQSFGVAS ENSTTRP00000000573/1-447 LVRSQTLPRT SGAQARKALF EKWEQDT-AG K--GETRAKL KRSQSFGVAS bmy_00221T0/1-456 LVRSQTLPRT SGAQARKALF EKWEQDT-AG KGKGETRAKL KRSQSFGVAS BACU006939/1-314 LVRSQTLPRT SGAQARKALF EKWEQNT-AG KGKGETRAKL KRSQSFGVAS 351 400 ENSP00000373964/1-461 ASSIKQILLE WCRSKTLGYQ HVDLQNFSSS WSDGMAFCAL VHSFFPDAFD ENSBTAP00000027457/1-458 ASSIKQILLE WCRSKTLGYQ HVDLQNFSSS WSDGMAFCAL VHSFFPDAFD ENSTTRP00000000573/1-447 ASSIKQILLE WCRNKTLGYQ HVDLQNFSSS WSDGMAFCAL VHSFFPDAFD bmy_00221T0/1-456 ASSIKQILLE WCRNKTLGYQ HVDLQNFSSS WSDGMAFCAL VHSFFPDAFD BACU006939/1-314 ASSIKQILLE WCRNKTLGYQ HVDLQNFSSS WSDGMAFCAL VHSFFPDAFD 401 450 ENSP00000373964/1-461 YNSLSPTQRQ KNFELAFTMA ENLANCERLI EVEDMMVMGR KPDPMCVFTY ENSBTAP00000027457/1-458 YNALSPTQRR QNFELAFTMA ENLANCERLI EVEDMMVMGR KPDPMCVFTY ENSTTRP00000000573/1-447 YNALSPAQRR QNFELAFTMA ENLANCERLI -VEDMMVMGR KT-PMCVFTY bmy_00221T0/1-456 YSALSPAQRR QNFQLAFTMA ENLANCERLI EVEDMMVMGR KPDPMCVFTY BACU006939/1-314 YNALSPAQRR QNFELAFTMA ENLANCERLI EVEDMMVMGR KPDPMCVFTY 451 500 ENSP00000373964/1-461 VQSLYNHLRR FE ENSBTAP00000027457/1-458 VQSLYNHLRR FE ENSTTRP00000000573/1-447 VQSLYNHL-- -- bmy_00221T0/1-456 VQSLYNHLRR FE BACU006939/1-314 VQSLYNHLRR FE