KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:31:02 2014 Check: 00 .. Name: BACU002929/1-406 Len: 411 Check: 3442 Weight: 1.00 Name: bmy_03332T0/1-388 Len: 411 Check: 4721 Weight: 1.00 Name: ENSBTAP00000027007/1-367 Len: 411 Check: 6438 Weight: 1.00 Name: ENSP00000272164/1-365 Len: 411 Check: 1000 Weight: 1.00 Name: ENSTTRP00000006375/1-365 Len: 411 Check: 2751 Weight: 1.00 // 1 50 BACU002929/1-406 -MGLTLAWLR KTLKLTEGPS QVTWALGPQK PGYVKGKCGQ WLCGKSGGLG bmy_03332T0/1-388 MGPLGLLSSC HHAFQPSRFF CCPSICSPRP AP---TFC-L WGRAHS-GLS ENSBTAP00000027007/1-367 ---------- ----QPSGSA AAPASAAAHP VP---ASL-L WSRAHF-GLC ENSP00000272164/1-365 ---------- ----MLDGSP LARWLAAAFG LTLLLAAL-R PSAAYF-G-- ENSTTRP00000006375/1-365 ---------- ----MLDGPL LARWLAAAFA LTLLLAAL-R PSAAYF-G-- 51 100 BACU002929/1-406 APVASSASPL ALLLNPKGPL KLTGSEPLTI LPLTLEPEAA AQAHYKACDR bmy_03332T0/1-388 VP-------- ---------- RLTGSEPLTI LPLTLEPEAA AQAHYKACDR ENSBTAP00000027007/1-367 VP-------- ---------- RLTGSEPLTI LPLTLEPEAV AQAHYKACDR ENSP00000272164/1-365 ---------- ---------- -LTGSEPLTI LPLTLEPEAA AQAHYKACDR ENSTTRP00000006375/1-365 ---------- ---------- -LTGSEPLTI LPLTLEPEAA AQAHYKACDR 101 150 BACU002929/1-406 LKLERKQRRM CRRDPGVAET LMEAVSMSAL ECQYQFRFER WNCTLEGRYR bmy_03332T0/1-388 LKLERKQRRM CRRDPGVAET LVEAVSMSAL ECQYQFRFER WNCTLEGRYR ENSBTAP00000027007/1-367 LKLERKQRRM CRRDPGVAET LVEAVSMSAL ECQYQFRFER WNCTLEGRYR ENSP00000272164/1-365 LKLERKQRRM CRRDPGVAET LVEAVSMSAL ECQFQFRFER WNCTLEGRYR ENSTTRP00000006375/1-365 LKLERKQRRM CRRDPGVAET LVEAVSMSAL ECQYQFRFER WNCTLEGRYR 151 200 BACU002929/1-406 ASLLKRGFKE TAFLYAISSA GLTHALAKAC SAGRMERCTC DEAPDLENRE bmy_03332T0/1-388 ASLLKRGFKE TAFLYAISSA GLTHALAKAC SAGRMERCTC DEAPDLENRE ENSBTAP00000027007/1-367 ASLLKRGFKE TAFLYAISSA GLTHALAKAC SAGRMERCTC DEAPDLENRE ENSP00000272164/1-365 ASLLKRGFKE TAFLYAISSA GLTHALAKAC SAGRMERCTC DEAPDLENRE ENSTTRP00000006375/1-365 ASLLKRGFKE TAFLYAISSA GLTHALAKAC SAGRMERCTC DEAPDLENRE 201 250 BACU002929/1-406 AWQWGGCGDN LKYSSKFVKE FLGRRSSKDL RARVDFHNNL VGVKASG--- bmy_03332T0/1-388 AWQWGGCGDN LKYSSKFVKE FLGRRSSKDL RARVDFHNNL VGVKASGVGC ENSBTAP00000027007/1-367 AWQWGGCGDN LKYSSKFVKE FLGRRSSKDL RARVDFHNNL VGVK------ ENSP00000272164/1-365 AWQWGGCGDN LKYSSKFVKE FLGRRSSKDL RARVDFHNNL VGVK------ ENSTTRP00000006375/1-365 AWQWGGCGDN LKYSSKFVKE FLGRRSSKDL RARVDFHNNL VGVK------ 251 300 BACU002929/1-406 -VIKAGVETT CKCHGVSGSC TVRTCWRQLA PFHEVGKRLK HKYETALKVG bmy_03332T0/1-388 GVIKAGVETT CKCHGVSGSC TVRTCWRQLA PFHEVGKRLK HKYETALKVG ENSBTAP00000027007/1-367 -VIKAGVETT CKCHGVSGSC TVRTCWRQLA PFHEVGKRLK HKYETALKVG ENSP00000272164/1-365 -VIKAGVETT CKCHGVSGSC TVRTCWRQLA PFHEVGKHLK HKYETALKVG ENSTTRP00000006375/1-365 -VIKAGVETT CKCHGVSGSC TVRTCWRQLA PFHEVGKRLK HKYETALKVG 301 350 BACU002929/1-406 STTNEATGEA GALSPPRGRA TGTGGGDPLP RTPELVHLDD SPSFCLAGRF bmy_03332T0/1-388 STTNEATGEA GAISPPRGRA TGTGGGDPLP RTPELVHLDD SPSFCLAGRF ENSBTAP00000027007/1-367 STTNEATGEA GAISPPRGRA AGAGGGDPLP RTPELVHLDD SPSFCVAGRF ENSP00000272164/1-365 STTNEAAGEA GAISPPRGRA SGAGGSDPLP RTPELVHLDD SPSFCLAGRF ENSTTRP00000006375/1-365 STTNEATGEA GAISPPRGRA TGTGGGDPLP RTPELVHLDD SPSFCLAGRF 351 400 BACU002929/1-406 SPGTAGRRCH REKNCESICC GRGHNTQSRV VTRPCQCQVR WCCYVECRQC bmy_03332T0/1-388 SPGTAGRRCH REKNCESICC GRGHNTQSRV VTRPCQCQVR WCCYVECRQC ENSBTAP00000027007/1-367 SPGTAGRRCH REKNCESICC GRGHNTQSRV VTRPCQCQVR WCCYVECRQC ENSP00000272164/1-365 SPGTAGRRCH REKNCESICC GRGHNTQSRV VTRPCQCQVR WCCYVECRQC ENSTTRP00000006375/1-365 SPGTAGRRCH REKNCESICC GRGHNTQSRV VTRPCQCQVR WCCYVECRQC 401 450 BACU002929/1-406 TQREEVYTCK G bmy_03332T0/1-388 TQREEVYTCK G ENSBTAP00000027007/1-367 TQREEVYTCK G ENSP00000272164/1-365 TQREEVYTCK G ENSTTRP00000006375/1-365 TQREEVYTCK G