KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:30:43 2014 Check: 00 .. Name: ENSTTRP00000002610/1-547 Len: 595 Check: 6925 Weight: 1.00 Name: ENSP00000209873/1-546 Len: 595 Check: 6475 Weight: 1.00 Name: ENSBTAP00000026878/1-556 Len: 595 Check: 656 Weight: 1.00 Name: bmy_04679T0/1-586 Len: 595 Check: 9800 Weight: 1.00 Name: BACU008074/1-484 Len: 595 Check: 8263 Weight: 1.00 // 1 50 ENSTTRP00000002610/1-547 ---------- ---------- ---------- ---------M CSLALFPPPP ENSP00000209873/1-546 ---------- ---------- ---------- ---------M CSLGLFPPPP ENSBTAP00000026878/1-556 ---------- ---------- ---------- ---------M CSLGLFPPPP bmy_04679T0/1-586 HSRLSRATTR THPNLARELR VGGAGSGSLL SPDVFGTGRM CSLGLFPPPP BACU008074/1-484 ---------- ---------- ---------- ---------M CSLGLFPPPP 51 100 ENSTTRP00000002610/1-547 PRGQVTLYEH NNELVTGSSY ESPPPDFRGQ WINLPVLNLT KDPLKTPGRL ENSP00000209873/1-546 PRGQVTLYEH NNELVTGSSY ESPPPDFRGQ WINLPVLQLT KDPLKTPGRL ENSBTAP00000026878/1-556 PRGQITLYEH NNELVTGSSC ESPPPDFRGQ WINLPVLNLT KDPLKTPGRL bmy_04679T0/1-586 PRGQVTLYEH NNELVTGSSY ESPPPDFRGQ WINLPVLNLT KDPLKTPGRL BACU008074/1-484 PRGQVTLYEH NNELVTGSSY ESPPPDFRGQ WINLPVLNLT KDPLKTPGRL 101 150 ENSTTRP00000002610/1-547 DHGTRTAFIH HREQVWKRCI NIWRDVGLFG VLNEIADSEE EVFEWVKTAS ENSP00000209873/1-546 DHGTRTAFIH HREQVWKRCI NIWRDVGLFG VLNEIANSEE EVFEWVKTAS ENSBTAP00000026878/1-556 DHGTRTAFIH HREQVWKRCI NIWRDVGLFG VLNEIANSEE EVFEWVKTAS bmy_04679T0/1-586 DHGTRTAFIH HREQVWKRCI NIWRDVGLFG VLNEIADSEE EVFEWVKTAS BACU008074/1-484 DHGTRTAFIH HREQVWKRCI NIWRDVGLFG VLNEIADSEE EVFEWVKTAS 151 200 ENSTTRP00000002610/1-547 SWALALCRWA SSLHGSLFPH LSLRSEDLIA EFAQVTNWSS CCLRVFAWHP ENSP00000209873/1-546 GWALALCRWA SSLHGSLFPH LSLRSEDLIA EFAQVTNWSS CCLRVFAWHP ENSBTAP00000026878/1-556 SWALALCRWA SSLHGSLFPH LSLRSEDLIA EFAQVTNWSS CCLRVFAWHP bmy_04679T0/1-586 SWALALCRWA SSLHGSLFPH LSLRSEDLIA EFAHVTNWSS CCLRVFAWHP BACU008074/1-484 SWALALCRWA SSLHGSLFPH LSLRSEDLIA EFAQVTNWSS CCLRVFAWHP 201 250 ENSTTRP00000002610/1-547 HTNKFAVALL DDSIRVYNAN XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000209873/1-546 HTNKFAVALL DDSVRVYNAS STIVPSLKHR LQRNVASLAW KPLSASVLAV ENSBTAP00000026878/1-556 HTNKFAVALL DDSVRVYNAN STIVPSLKHR LQRNVAALAW KPLSASVLAV bmy_04679T0/1-586 HTNKFAVALL DDSIRVYNAN STIVPSLKHR LQRNVAALAW KPLSASVLAV BACU008074/1-484 HTNKFAVALL DDSIRVYNAN STIVPSLKHR LQRNVAALAW KPLSASVLAV 251 300 ENSTTRP00000002610/1-547 XXXXXXXXXX XXXXXXXXXP SSGCAQVLSH PGHTPVTSLA WAPSGGRLLS ENSP00000209873/1-546 ACQSCILIWT LDPTSLSTRP SSGCAQVLSH PGHTPVTSLA WAPSGGRLLS ENSBTAP00000026878/1-556 ACQSCILIWT LDPTSLSTRP SSGCAQVLSH PGHTPVTSLA WAPSGGRLLS bmy_04679T0/1-586 ACQSCILIWT LDPTSLSTRP SSGCAQVLSH PGHTPVTSLA WAPSGGRLLS BACU008074/1-484 ACQSCILIWT LDPTSLSTRP SSGCAQVLSH PGHTPVTSLA WAPSGGRLLS 301 350 ENSTTRP00000002610/1-547 ASPVDAAILV WDVSTETCVP LPWFRGGGVT NLLWSPDGSK VLATTPSALF ENSP00000209873/1-546 ASPVDAAIRV WDVSTETCVP LPWFRGGGVT NLLWSPDGSK ILATTPSAVF ENSBTAP00000026878/1-556 ASPVDAAILV WDVSTETCVP LPWFRGGGVT NLLWSPDGSK VLATTPSAVF bmy_04679T0/1-586 ASPVDAAILV WDVSTETCVP LPWFRGGGVT NLLWSPDGSK VLATTPSAVF BACU008074/1-484 ASPVDAAILV WDVSTETCVP LPWFRGGGVT NLLWSPDGSK VLATTPSAVF 351 400 ENSTTRP00000002610/1-547 RVWEAQMWTC ERWPTLSGRC QTGCWSPDGN RLLFTVLGEP LIYSLSFPER ENSP00000209873/1-546 RVWEAQMWTC ERWPTLSGRC QTGCWSPDGS RLLFTVLGEP LIYSLSFPER ENSBTAP00000026878/1-556 RVWEAQMWTC ERWPTLSGRC QTGCWSPSGN RLLFTVLGEP LIYSLSFPER bmy_04679T0/1-586 RVWEAQMWTC ERWPTLSGRC QTGCWSPDGN RLLFTVLGEP LIYSLSFPER BACU008074/1-484 RVWEAQMWTC ERWPTLSGRC QTGCWSPDGN RLLFTVLGEP LIYSLSFPER 401 450 ENSTTRP00000002610/1-547 CGERKGCVGG AKSATIVADL SETTVQTPDG EERLGGEAHS MVWDPSGERL ENSP00000209873/1-546 CGEGKGCVGG AKSATIVADL SETTIQTPDG EERLGGEAHS MVWDPSGERL ENSBTAP00000026878/1-556 CGEGKGYVGG AKSATIVADL SETTIQTPDG EERLGGEAHS MVWDPSGERL bmy_04679T0/1-586 CGERKGCVGG AKSATIVADL SETTIQTPDG EERLGGEAHS MVWDPSGERL BACU008074/1-484 CGERKGCVGG AKSATIVADL SETTVQTPDG EERLGGEAHS MVWDPSGERL 451 500 ENSTTRP00000002610/1-547 AVLMKGNPRV QNGKPVILLF RTRNSPVFEL LPC------- --GAVQGEPG ENSP00000209873/1-546 AVLMKGKPRV QDGKPVILLF RTRNSPVFEL LPC------- --GIIQGEPG ENSBTAP00000026878/1-556 AVLMKGNPRV QNGKPVILLF RTRNSPVFEL LPCCLLTFSS SSGIIQGELG bmy_04679T0/1-586 AVLMKGNPRV QNGKPVILLF RTRNSPVFEL LPC------- --GTVQGEPG BACU008074/1-484 AVLMKGNPRV QNGKPVILLF RTRNSPVFEL LPC------- --GTVQGEPG 501 550 ENSTTRP00000002610/1-547 AQAQLITFHP SFNKGALLSV CWSTGRIAHI PLYFVNAQFP RFSPVLGRTQ ENSP00000209873/1-546 AQPQLITFHP SFNKGALLSV GWSTGRIAHI PLYFVNAQFP RFSPVLGRAQ ENSBTAP00000026878/1-556 AQAQLITFHP SFNKGALLSV CWSTGRVTHI PLYFVNARFP RFSPVLGRAQ bmy_04679T0/1-586 AQAQLITFHP SFNKGALLSV CWSTGRIAHI PLYFVNAQFP RFSPVLGRTQ BACU008074/1-484 AQAQLITFHP SFNKGALLSV V--------- ---------- ---------- 551 600 ENSTTRP00000002610/1-547 EPPAGGGGSI HDLPLFTETS PTSAPWDPLP GPPLGRPHSP HSRIQ ENSP00000209873/1-546 EPPAGGGGSI HDLPLFTETS PTSAPWDPLP GPPPVLPHSP HSHL- ENSBTAP00000026878/1-556 EPPAGGGGSI HDLPLFTETS PTSAPWDPLP GPPPARPHSP HSHFQ bmy_04679T0/1-586 EPPAGGGGSI HDLPLFTETS LTSAPWDPLP GPPPGRPHSP HSRIQ BACU008074/1-484 ---------- ---------- ---------- ----SRPAAA VAGVG