KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:29:53 2014 Check: 00 .. Name: ENSP00000296861/1-655 Len: 661 Check: 4700 Weight: 1.00 Name: bmy_00007T0/1-542 Len: 661 Check: 2269 Weight: 1.00 Name: ENSBTAP00000026719/1-652 Len: 661 Check: 4118 Weight: 1.00 Name: BACU015837/1-652 Len: 661 Check: 7031 Weight: 1.00 Name: ENSTTRP00000006257/1-623 Len: 661 Check: 7603 Weight: 1.00 // 1 50 ENSP00000296861/1-655 --MGTSPSSS TALASCSRIA RRATATM--- -IAGSLLLLG FLSTTTAQPE bmy_00007T0/1-542 MSLGTNMMNR RNRKCDEEFD RRLGIWVSRN GCKGFIEKLG FLSTTRAQPE ENSBTAP00000026719/1-652 --MGTFTSSS TALASCSRM- --AGATM--- -IAGSFLLLG FLSTTRAQPE BACU015837/1-652 --MGISASSS TAPASCSRI- --AGATM--- -IAGSLFLLG FLSTTRAQPE ENSTTRP00000006257/1-623 ---------- ---------- ---------- --------LG FLSTTRAQPE 51 100 ENSP00000296861/1-655 QKASNLIGTY RHVDRATGQV LTCDKCPAGT YVSEHCTNTS LRVCSSCPVG bmy_00007T0/1-542 QKAPSLIGKY HHVDRVTGQV LTCDKCPAGT YVSEHCTNTS LRVCSSCPMG ENSBTAP00000026719/1-652 QKAPSLIGKY HHVDRITGQV LTCDKCPAGT YVSEHCTNIS LRVCSSCPTG BACU015837/1-652 QKAPSLIGKY HHVDRVTGQV LTCDKCPAGT YVSEHCTNTS LRVCSSCPMG ENSTTRP00000006257/1-623 QKAPSLIGKY HHVDRVTGQV LTCDKCPAGT YVSEHCTNTS LRVCSSCPTG 101 150 ENSP00000296861/1-655 TFTRHENGIE KCHDCSQPCP WPMIEKLPCA ALTDRECTCP PGMFQSNATC bmy_00007T0/1-542 TFTRHENGIE KCHGCSQPCP WPMIEKLPCA ALTDRECTCP PGMFQSNGTC ENSBTAP00000026719/1-652 TFTRHENGIE KCHECSQRCP WPMIEKLPCT ALTDRECTCP PGMFQSNGTC BACU015837/1-652 TFTRHENGIE KCHGCSQPCP WPMIEKLPCA ALTDRECTCP PGMFQSNGTC ENSTTRP00000006257/1-623 TFTRHENGIE KCHECSQPCP RPMIEKLPCA ALTDRECTCP PGMFQSNATC 151 200 ENSP00000296861/1-655 APHTVCPVGW GVRKKGTETE DVRCKQCARG TFSDVPSSVM KCKAYTDCLS bmy_00007T0/1-542 APHTVCPVGW GVRKKGTEME DVRCKQCARG TFSDVPSSVR RCRAYTDCLS ENSBTAP00000026719/1-652 APHTVCPVGW GVRKKGTEME DVRCKQCARG TFSDVPSSVM RCRAYTDCLS BACU015837/1-652 APHTACPVGW GVRKKGTEME DVRCKQCARG TFSDVPSSVM RCRSYTDCLS ENSTTRP00000006257/1-623 APHTVCPVGW GVRKKGTETE DVRCKQCARG TFSDVPSSVM RCRAYTDCLS 201 250 ENSP00000296861/1-655 QNLVVIKPGT KETDNVCGTL PSFSSSTSPS PGTAIFPRPE HMETHEVPSS bmy_00007T0/1-542 QNLAVIRLGT KEADNVCGTL PPLSSTTPPS PGTISLSRPE HVEPHEVPSS ENSBTAP00000026719/1-652 QNMVVIKLGT KEADNVCGPL PSSSSTAPPS PGTTSLSRPE HTEPHDVPSS BACU015837/1-652 QNLVMIRLGT QEADNVCGTL PPLSSTTPPS PGTTSLSRPE HVEPHEVPSS ENSTTRP00000006257/1-623 QNLVVIRLGT KEADNVCGTL PPLSSTTPSS PGTISLSRPE HVEPHEVPSS 251 300 ENSP00000296861/1-655 TYVPKGMNST ESNSSASVRP KVLSSIQEGT VPDNTSSARG KEDVNKTLPN bmy_00007T0/1-542 TYVPKGMNST ESNSSASVRP KVPSGIQEGT VPENTSSAKG EEGMNKTLPN ENSBTAP00000026719/1-652 TLIPKGINST ESNSSASVRP KVPSGTQEGT APDNTSSASG EEGVNKTFPK BACU015837/1-652 TYVPKGMNST ESNSSASVRP KVPSGIQEGT VPENTSSAKG EEGMNKTLPN ENSTTRP00000006257/1-623 TYVPKGVNST ESNSSASVRP KVPSGIQEGT VPENTSSAKG EEGTNKTLPN 301 350 ENSP00000296861/1-655 LQVVNHQQGP HHRHILKLLP SMEATGGEKS STPIKGPKRG HPRQNLHKHF bmy_00007T0/1-542 LQVVNHQQGP HHRHILKLLP SMEATGGEKS STPIKGLKRG HPRQNPHKHF ENSBTAP00000026719/1-652 LQVANHQQGP HHRHILKLLP SMEATGGEKS STPIKGLKRG HPRQNPHKHF BACU015837/1-652 LQVVNHQQGP HHRHILKLLP SMEATGGEKS STPIKGLKRG HPRQNPHKHF ENSTTRP00000006257/1-623 LQVVNHQQGP HHRHILKLLP SMEATGGEKS STPIKGLKRG HPRQNPHKHF 351 400 ENSP00000296861/1-655 DINEHLPWMI VLFLLLVLVV IVVCSIRKSS RTLKKGPRQD PSAIVEKAGL bmy_00007T0/1-542 DINEHLPWMI VLFLLLVLVV IVVCSIRKSS RTLKKGPRQD PSTIVEKAGL ENSBTAP00000026719/1-652 DINEHLPWMI VLFLLLVLVV IVVCSIRKSS RTLKKGPRQD PSAIVEKAGL BACU015837/1-652 DINEHLPWMI VLFLLLVLVV IVVCSIRKSS RTLKKGPRQD PSTIVEKAGL ENSTTRP00000006257/1-623 DINEHLPWMI VLFLLLVLVV IVVCSIRKSS RTLKKGPRQD PSTIVEKAGL 401 450 ENSP00000296861/1-655 KKSMTPTQNR EKWIYYCNGH GIDILKLVAA QVGSQWKDIY QFLCNASERE bmy_00007T0/1-542 KKSMTPTQNR EKWIYYCNGH GIDILKLVAA QVGSQWKDIY QLLCNASERE ENSBTAP00000026719/1-652 KKSMAPTQNR EKWIYYCNGH GIDILKLVAA QVGSQWKDIY QFLCNASERE BACU015837/1-652 KKSMTPTQNR EKWIYYCNGH GIDILKLVAA QVGSQWKDIY QLLCNASERE ENSTTRP00000006257/1-623 KKSMAPTQNR EKWVYYCNGH GIDILKLVAA QVGSQWKDIY QLLCNASERE 451 500 ENSP00000296861/1-655 VAAFSNGYTA DHERAYAALQ HWTIRGPEAS LAQLISALRQ HRRNDVVEKI bmy_00007T0/1-542 VAAFSNGYTA DHERAYAALQ HWTIRGPEAS LAQLISALRQ HRRNDVVEKI ENSBTAP00000026719/1-652 VAAFSNGYTA DHERAYAALQ HWTIRGPEAS LAQLISALRQ HRRNDVVEKI BACU015837/1-652 VAAFSNGYTA DHERAYAALQ HWTIRGPEAS LAQLISALRQ HRRNDVVEKI ENSTTRP00000006257/1-623 VAAFSNGYTA DHERAYAALQ HWTIRGPEAS LAQLISALRQ HRRNDVVEKI 501 550 ENSP00000296861/1-655 RGLMEDTTQL ETDKLALPMS PSPLSPSPIP SPNAKLENSA LLTVEPSPQD bmy_00007T0/1-542 RGLMEDTAQL Q--------- ---------- ---------- ---------- ENSBTAP00000026719/1-652 RGLMEDTAQL DTDKLALPMS PSPLGPSPIP SPNTKLENST LLTVEPSPLD BACU015837/1-652 RGLMEDTAQL ETDKLALPRS PSPLSTSPVA SPNPKLENST LLTVEPSPLD ENSTTRP00000006257/1-623 RGLMEDTAQL ETDKLALPRS PSPLSTSPVA SPNPKLENST LLTVEPSPLD 551 600 ENSP00000296861/1-655 KNKGFFVDES EPLLRCDSTS SGSSALSRNG SFITKEKKDT VLRQVRLDPC bmy_00007T0/1-542 -DAAVFIYS- -----VTETS SFQNLIQRGG TLIY------ ---------- ENSBTAP00000026719/1-652 KNKGFFVDES EPLLRCDSTS SGSSALSRNG SFITKEKKDT VLRQVRLDPC BACU015837/1-652 KNKGFFVDES EPLLRCDSTS SGSSALSRTG SFITKEKKDT VLRQVRLDPC ENSTTRP00000006257/1-623 KNKGFFVDES EPLLRCDSTS SGSSALSRTG SFITKEKKDT VLRQVRLDPC 601 650 ENSP00000296861/1-655 DLQPIFDDML HFLNPEELRV IEEIPQAEDK LDRLFEIIGV KSQEASQTLL bmy_00007T0/1-542 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026719/1-652 DLQPIFDDML HILNPEELRV IEETPQAEDK LDRLFEIIGV KSQEASQTLL BACU015837/1-652 DLQPIFDDML HILNPEELRV IEEIPQAEDK LDRLFEIIGV KSQEASQTLL ENSTTRP00000006257/1-623 DLQPIFDDML HILNPEELRV IEEIPQAEDK LDRLFEIIGV KSQEASQTLL 651 700 ENSP00000296861/1-655 DSVYSHLPDL L bmy_00007T0/1-542 -------PQL G ENSBTAP00000026719/1-652 DSVYSHLPDL L BACU015837/1-652 DSVYSHLPDL L ENSTTRP00000006257/1-623 DSVYSHLPDL L