KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:28:40 2014 Check: 00 .. Name: bmy_13584T0/1-365 Len: 541 Check: 6026 Weight: 1.00 Name: ENSBTAP00000026333/1-513 Len: 541 Check: 645 Weight: 1.00 Name: BACU005833/1-453 Len: 541 Check: 4479 Weight: 1.00 Name: ENSTTRP00000000326/1-496 Len: 541 Check: 4439 Weight: 1.00 // 1 50 bmy_13584T0/1-365 ---------- ---------- ---------- MVPFLT---- ---------- ENSBTAP00000026333/1-513 MRGGRHWPEP PCRLRSVMAS IAQVSLAALL LLPMATAMHS DCIFKKEQAM BACU005833/1-453 ---------- -------MAS VIQASLAALL LLPMATAMHS DCMFKKEQAM ENSTTRP00000000326/1-496 ---------- -------MAS VIQASLAALL LLPMATAMHS DCIFKKGQAM 51 100 bmy_13584T0/1-365 ---------- ---------G CPGMWDNITC WKPAHVGEMV LVSCPELFRI ENSBTAP00000026333/1-513 CLEKIQRVND LMGLNDSSPG CPGMWDNITC WKPAHVGEMV LVSCPELFRI BACU005833/1-453 CLEKIQRANE LLGLNDSSP- ---------- ---------- ---------- ENSTTRP00000000326/1-496 CLEKIQRANE LMGLNDSSPG CPGMWDNITC WKPAHVGEMV LVSCPELFRI 101 150 bmy_13584T0/1-365 FNPDQ----- --GEFGFADS NSLDLSGMRV VSRNCTEDGW SEPFPHYFDA ENSBTAP00000026333/1-513 FNPDQVWETE TIGEFGFADS KSLDLSDMRV VSRNCTEDGW SEPFPHYFDA BACU005833/1-453 ---------- --GEFGFADS NSLDLSGMRV VSRNCTEGGW SEPFPHYFDA ENSTTRP00000000326/1-496 FNPDQVWETE TIGEFGFADS NSLDPSGMRV VSRNCTEDGW SEPFPHYFDA 151 200 bmy_13584T0/1-365 CGFDEYESET GDQDYYYLSV KALYTVGYST SLVTLTTAMV ILCRFRKLHC ENSBTAP00000026333/1-513 CGFEEYESET GDQDYYYLSV KALYTVGYST SLVTLTTAMV ILCRFRKLHC BACU005833/1-453 CGFDEYESET GDQDYYYLSV KTLYTVGYST SLVTLTTAMV ILCRFRKLHC ENSTTRP00000000326/1-496 CGFDEYESET GDQDYYYLSV KALYTVGYST SLVTLTTAMV ILCRFRKLHC 201 250 bmy_13584T0/1-365 TRNFIHMNLF VSFMLRAISV FIKDWILYAE QDSNHCFIST VECKAVMVFF ENSBTAP00000026333/1-513 TRNFIHMNLF VSFMLRAISV FIKDWILYAE QDSNHCFVST VECKAVMVFF BACU005833/1-453 TRNFIHMNLF VSFMLRAISV FIKDWILYAE QDSNHCFIST VECKAVMVFF ENSTTRP00000000326/1-496 TRNFIHMNLF ASFMLRAISV FIKDWILYAE QDGNHCFVST VECKAVMVFF 251 300 bmy_13584T0/1-365 HYCVVSNYFW LFIEGLYLFT LLVETFFPER RYFYWYIIIG WGTPTVCVSV ENSBTAP00000026333/1-513 HYCVVSNYFW LFIEGLYLFT LLVETFFPER RYFYWYIIIG WGTPTVCVSV BACU005833/1-453 HYCVVSNYFW LFIEGLYLFT LLVETFFPER RYFYWYIIIG WGTPTVCVSV ENSTTRP00000000326/1-496 HYCVVSNYFW LFIEGLYLFT LLVETFFPER RYFYWYILIG WGTPTVCVSV 301 350 bmy_13584T0/1-365 WAVLRLYFDD TGCWDMNDNT ALWWVIKAPV VGSIMVNFVL FIGIIVILVQ ENSBTAP00000026333/1-513 WAMLRLYFDD TGCWDMNDNT ALWWVIKGPV VGSIMVNFVL FIGIIVILVQ BACU005833/1-453 WAVLRLYFDD TGCWDMNDNT ALWWVIKAPV VGSIMVNFVL FIGIIVILVQ ENSTTRP00000000326/1-496 WAVLRLYFDD TGCWDMNDNT ALWWVIKAPV VGSIMVNFVL FVGIIVILVQ 351 400 bmy_13584T0/1-365 KLQSPDMGGN ESSIYLTNLS LGIPKKARED PLPVPSDQHS LPFLSCVQKC ENSBTAP00000026333/1-513 KLQSPDMGGN ESSIY----- ---------- ---------- ---FSCVQKC BACU005833/1-453 KLQSPDMGGN ESSIY----- ---------- ---------- ---FSCVQKC ENSTTRP00000000326/1-496 KLQSPDMGGN ESSIY----- ---------- ---------- ---FSCVQKC 401 450 bmy_13584T0/1-365 YCKPQRAQQH SCKMSELSTI TLPHAPGE-- ---------- ----NPE--- ENSBTAP00000026333/1-513 YCKPQRAQQH SCKMSELSTI TLRLARSTLL LIPLFGIHYT VFAFSPENVS BACU005833/1-453 YCRPQRAQQH SCKMSELSTI TLRLARSTLL LIPLFGIHYT VFAFSPEDVS ENSTTRP00000000326/1-496 YCRPQRAQQH PCKMSELSTI TLRLARSTLL LIPLFGIHYT VFAFSPEDVS 451 500 bmy_13584T0/1-365 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000026333/1-513 KRERLVFELG LGSFQGFVVA VLYCFLNGEV QAEIKRKWRS WKVNRYFTMD BACU005833/1-453 KRERLVFELG LGSFQGFVVA VLYCFLNGEV QAEIKRKWRS WKVNRYFTMD ENSTTRP00000000326/1-496 KRERLVFELG LGSFQGFVVA VLYCFLNGEV QAEIKRKWRS WKVNRYFTMD 501 550 bmy_13584T0/1-365 ---------- -GAHG----- ---------- ---------- - ENSBTAP00000026333/1-513 FKHRHPSLAS SGVNGGTQLS ILSKSSSQIR MSGLPADNLA T BACU005833/1-453 FKHRHPSLAS SGVNGGTQLS ILSKSSSQIR MSGLPADNLA T ENSTTRP00000000326/1-496 FKHRHPSLAS SGVNGGTQLS ILSKSSSQIR MSGLPADNLA T